FFCP PHASE1:Hg19::chr12:52710803..52710809,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C526|description=CAGE_peak_at_chr12:52710803..52710809,-|id=chr12:52710803..52710809,-|ontology_enrichment_celltype=CL:0000066!1.73e-12!254;CL:0002327!1.20e-07!4;CL:1000497!4.52e-07!18;CL:0002518!4.52e-07!18;CL:1000507!5.00e-07!12;CL:1000494!5.00e-07!12|ontology_enrichment_celltype_v019=CL:1000507;1.95e-14;10!CL:1000494;1.95e-14;10!CL:1000497;2.65e-14;17!CL:0002518;2.65e-14;17!CL:1000449;9.29e-13;15!CL:0002327;4.47e-10;4!CL:1000415;2.28e-09;2!CL:0002681;1.47e-08;12!CL:0002584;1.47e-08;12|ontology_enrichment_celltype_v019_2=CL:1000507,2.05e-14,10;CL:1000494,2.05e-14,10;CL:1000497,2.63e-14,17;CL:0002518,2.63e-14,17;CL:1000449,9.65e-13,15;CL:0000066,5.98e-12,253;CL:0002327,4.48e-10,4;CL:1000415,2.33e-09,2;CL:0002681,1.48e-08,12;CL:0002584,1.48e-08,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:7!1.12e-10!39;DOID:0050687!3.24e-10!143;DOID:305!4.60e-10!106;DOID:1749!1.49e-08!14;DOID:162!3.66e-08!235;DOID:14566!1.02e-07!239;DOID:5093!9.32e-07!4;DOID:1612!9.32e-07!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,5.32e-07,235;DOID:0050687,7.56e-07,143;DOID:14566,9.91e-07,239|ontology_enrichment_uberon=UBERON:0000058!4.30e-08!26;UBERON:0001911!1.20e-07!4;UBERON:0005333!1.20e-07!4;UBERON:0008425!1.20e-07!4;UBERON:0005311!1.20e-07!4;UBERON:0009773!5.00e-07!12;UBERON:0001231!5.00e-07!12;UBERON:0004810!5.00e-07!12;UBERON:0002294!5.20e-07!7;UBERON:0001173!5.20e-07!7;UBERON:0004912!5.20e-07!7;UBERON:0005153!5.71e-07!37|ontology_enrichment_uberon_v019=UBERON:0004211;1.95e-14;10!UBERON:0009773;1.95e-14;10!UBERON:0001231;1.95e-14;10!UBERON:0004810;1.95e-14;10!UBERON:0006555;9.29e-13;15!UBERON:0004819;9.29e-13;15!UBERON:0001285;9.29e-13;15!UBERON:0007684;9.29e-13;15!UBERON:0002294;4.21e-10;7!UBERON:0001173;4.21e-10;7!UBERON:0001911;4.47e-10;4!UBERON:0002113;9.57e-10;24!UBERON:0011143;9.57e-10;24!UBERON:0001225;1.47e-08;12!UBERON:0008987;1.47e-08;12!UBERON:0000489;7.67e-08;29!UBERON:0006554;1.54e-07;30!UBERON:0001008;1.54e-07;30!UBERON:0001851;8.86e-07;15!UBERON:0000353;8.86e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.05e-14,10;UBERON:0004211,9.65e-13,15;UBERON:0009773,9.65e-13,15;UBERON:0001231,9.65e-13,15;UBERON:0001285,9.65e-13,15;UBERON:0007684,9.65e-13,15;UBERON:0004208,9.65e-13,15;UBERON:0006555,6.98e-12,16;UBERON:0004819,6.98e-12,16;UBERON:0001911,4.48e-10,4;UBERON:0005333,4.48e-10,4;UBERON:0008425,4.48e-10,4;UBERON:0005311,4.48e-10,4;UBERON:0002113,6.74e-09,26;UBERON:0003918,6.74e-09,26;UBERON:0011143,6.74e-09,26;UBERON:0005095,6.74e-09,26;UBERON:0007687,6.74e-09,26;UBERON:0001225,1.48e-08,12;UBERON:0008987,1.48e-08,12;UBERON:0002294,7.48e-08,9;UBERON:0001173,7.48e-08,9;UBERON:0004912,7.48e-08,9;UBERON:0009569,1.52e-07,112;UBERON:0005153,1.70e-07,37;UBERON:0000489,2.96e-07,31;UBERON:0005172,4.83e-07,54;UBERON:0005173,4.83e-07,54;UBERON:0006554,6.09e-07,47;UBERON:0001851,8.92e-07,15;UBERON:0000353,8.92e-07,15;UBERON:0001008,9.27e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,22.3296373751177,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.829050053357545,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56163263431108,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,8.88003174301776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.506328996723799,1.26668106709558,0.504867548488229,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0,0,21.3149284032779,6.97521452433509,4.21720947081732,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,1.43248770591916,2.4658731678576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,1.40330047216537,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0.200506470303285,8.93185592678194,0,0,0,16.6943856775742,6.93138033939733,2.35304930753057,11.6911379722609,0.844413031143006,0,0,0,0,0,0,4.84264918785573,4.15538004464362,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0,0,0,0,0,0,0,0,0,1.39453664789186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C526 | |||
|description=CAGE_peak_at_chr12:52710803..52710809,- | |||
|id=chr12:52710803..52710809,- | |||
|ontology_enrichment_celltype=CL:0000066!1.73e-12!254;CL:0002327!1.20e-07!4;CL:1000497!4.52e-07!18;CL:0002518!4.52e-07!18;CL:1000507!5.00e-07!12;CL:1000494!5.00e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.95e-14;10!CL:1000494;1.95e-14;10!CL:1000497;2.65e-14;17!CL:0002518;2.65e-14;17!CL:1000449;9.29e-13;15!CL:0002327;4.47e-10;4!CL:1000415;2.28e-09;2!CL:0002681;1.47e-08;12!CL:0002584;1.47e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.05e-14,10;CL:1000494,2.05e-14,10;CL:1000497,2.63e-14,17;CL:0002518,2.63e-14,17;CL:1000449,9.65e-13,15;CL:0000066,5.98e-12,253;CL:0002327,4.48e-10,4;CL:1000415,2.33e-09,2;CL:0002681,1.48e-08,12;CL:0002584,1.48e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:7!1.12e-10!39;DOID:0050687!3.24e-10!143;DOID:305!4.60e-10!106;DOID:1749!1.49e-08!14;DOID:162!3.66e-08!235;DOID:14566!1.02e-07!239;DOID:5093!9.32e-07!4;DOID:1612!9.32e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.32e-07,235;DOID:0050687,7.56e-07,143;DOID:14566,9.91e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000058!4.30e-08!26;UBERON:0001911!1.20e-07!4;UBERON:0005333!1.20e-07!4;UBERON:0008425!1.20e-07!4;UBERON:0005311!1.20e-07!4;UBERON:0009773!5.00e-07!12;UBERON:0001231!5.00e-07!12;UBERON:0004810!5.00e-07!12;UBERON:0002294!5.20e-07!7;UBERON:0001173!5.20e-07!7;UBERON:0004912!5.20e-07!7;UBERON:0005153!5.71e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.95e-14;10!UBERON:0009773;1.95e-14;10!UBERON:0001231;1.95e-14;10!UBERON:0004810;1.95e-14;10!UBERON:0006555;9.29e-13;15!UBERON:0004819;9.29e-13;15!UBERON:0001285;9.29e-13;15!UBERON:0007684;9.29e-13;15!UBERON:0002294;4.21e-10;7!UBERON:0001173;4.21e-10;7!UBERON:0001911;4.47e-10;4!UBERON:0002113;9.57e-10;24!UBERON:0011143;9.57e-10;24!UBERON:0001225;1.47e-08;12!UBERON:0008987;1.47e-08;12!UBERON:0000489;7.67e-08;29!UBERON:0006554;1.54e-07;30!UBERON:0001008;1.54e-07;30!UBERON:0001851;8.86e-07;15!UBERON:0000353;8.86e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.05e-14,10;UBERON:0004211,9.65e-13,15;UBERON:0009773,9.65e-13,15;UBERON:0001231,9.65e-13,15;UBERON:0001285,9.65e-13,15;UBERON:0007684,9.65e-13,15;UBERON:0004208,9.65e-13,15;UBERON:0006555,6.98e-12,16;UBERON:0004819,6.98e-12,16;UBERON:0001911,4.48e-10,4;UBERON:0005333,4.48e-10,4;UBERON:0008425,4.48e-10,4;UBERON:0005311,4.48e-10,4;UBERON:0002113,6.74e-09,26;UBERON:0003918,6.74e-09,26;UBERON:0011143,6.74e-09,26;UBERON:0005095,6.74e-09,26;UBERON:0007687,6.74e-09,26;UBERON:0001225,1.48e-08,12;UBERON:0008987,1.48e-08,12;UBERON:0002294,7.48e-08,9;UBERON:0001173,7.48e-08,9;UBERON:0004912,7.48e-08,9;UBERON:0009569,1.52e-07,112;UBERON:0005153,1.70e-07,37;UBERON:0000489,2.96e-07,31;UBERON:0005172,4.83e-07,54;UBERON:0005173,4.83e-07,54;UBERON:0006554,6.09e-07,47;UBERON:0001851,8.92e-07,15;UBERON:0000353,8.92e-07,15;UBERON:0001008,9.27e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,22.3296373751177,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.829050053357545,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56163263431108,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,8.88003174301776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.506328996723799,1.26668106709558,0.504867548488229,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0,0,21.3149284032779,6.97521452433509,4.21720947081732,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,1.43248770591916,2.4658731678576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,1.40330047216537,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0.200506470303285,8.93185592678194,0,0,0,16.6943856775742,6.93138033939733,2.35304930753057,11.6911379722609,0.844413031143006,0,0,0,0,0,0,4.84264918785573,4.15538004464362,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0,0,0,0,0,0,0,0,0,1.39453664789186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74463030566391,0,0,0,0,0,0,51.4945652074183,81.991698001429,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,2.79679015322043,0.945550727071745,0,0,0,0,0,0,0,0,0,63.1843088410143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941798755221676,0,0,0.277349346026277,0,1.27390116638691,45.2707874218093,0,0,0,0.0730893170861856,0,0,0,0,41.3866612433188,0.397429223405979,0,3.91102765469606,17.1539875338282,0,0,0,0,0,0,0,0,1.22313785466253,1.569042694685,1.52997326454483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,2.33073541132698,0.191915197319445,0,0,0,0,0,0,0,0,0,1.58636928128176,0,0,0,0,37.8101911724368,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.624902039810533,0,0,118.33870730818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,2.04035332961045,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,5.56936743038901,0,0.211312123358627,0,0,0,3.97261167496785,0,29.9342146519611,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3165777297123,0.235939446695481,0,0.346576998451015,1.1441462864015,0,0,0,0.20170506870352,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,8.23142445299609,0,0,0.118193840883968,47.3845772060215,0.156986185701028,0,0,0,1.51149313853035,0,0,0,0,0,0.801711364730253,0.62164849248911,0,0,0,0,0,0,0.9164274741762,0.62041277132864,7.64431151181946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0.71421575442263,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:52710803..52710809,- | |||
}} |
Revision as of 23:08, 10 September 2013
Short description: | p@chr12:52710803..52710809, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52710803..52710809, - |
Coexpression cluster: | C526_meningioma_bile_cervical_fibrosarcoma_prostate_epidermoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.05e-14 | 10 |
nephron tubule epithelial cell | 2.05e-14 | 10 |
kidney cell | 2.63e-14 | 17 |
kidney epithelial cell | 2.63e-14 | 17 |
epithelial cell of nephron | 9.65e-13 | 15 |
epithelial cell | 5.98e-12 | 253 |
mammary gland epithelial cell | 4.48e-10 | 4 |
epithelial cell of gall bladder | 2.33e-09 | 2 |
kidney cortical cell | 1.48e-08 | 12 |
renal cortical epithelial cell | 1.48e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.05e-14 | 10 |
nephron epithelium | 9.65e-13 | 15 |
renal tubule | 9.65e-13 | 15 |
nephron tubule | 9.65e-13 | 15 |
nephron | 9.65e-13 | 15 |
uriniferous tubule | 9.65e-13 | 15 |
nephrogenic mesenchyme | 9.65e-13 | 15 |
excretory tube | 6.98e-12 | 16 |
kidney epithelium | 6.98e-12 | 16 |
mammary gland | 4.48e-10 | 4 |
mammary bud | 4.48e-10 | 4 |
mammary ridge | 4.48e-10 | 4 |
mammary placode | 4.48e-10 | 4 |
kidney | 6.74e-09 | 26 |
kidney mesenchyme | 6.74e-09 | 26 |
upper urinary tract | 6.74e-09 | 26 |
kidney rudiment | 6.74e-09 | 26 |
kidney field | 6.74e-09 | 26 |
cortex of kidney | 1.48e-08 | 12 |
renal parenchyma | 1.48e-08 | 12 |
biliary system | 7.48e-08 | 9 |
biliary tree | 7.48e-08 | 9 |
biliary bud | 7.48e-08 | 9 |
subdivision of trunk | 1.52e-07 | 112 |
epithelial bud | 1.70e-07 | 37 |
cavitated compound organ | 2.96e-07 | 31 |
abdomen element | 4.83e-07 | 54 |
abdominal segment element | 4.83e-07 | 54 |
urinary system structure | 6.09e-07 | 47 |
cortex | 8.92e-07 | 15 |
parenchyma | 8.92e-07 | 15 |
renal system | 9.27e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.32e-07 | 235 |
cell type cancer | 7.56e-07 | 143 |
disease of cellular proliferation | 9.91e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.