FFCP PHASE1:Hg19::chr14:61929802..61929817,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5583|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9403|TSSclassifier=S|UniProt=|association_with_transcript=15bp_to_ENST00000555233_5end|description=CAGE_peak_35_at_PRKCH_5end|id=chr14:61929802..61929817,+|ontology_enrichment_celltype=CL:0000680!1.76e-17!57;CL:0000056!1.76e-17!57;CL:0000355!1.76e-17!57;CL:0000187!6.60e-15!54;CL:0000183!2.93e-13!59;CL:0000393!5.80e-13!60;CL:0000211!5.80e-13!60;CL:0000055!1.04e-10!180;CL:0002494!3.70e-09!16;CL:0000188!8.71e-09!9;CL:0000222!1.54e-07!119;CL:0000192!5.99e-07!42;CL:0000514!5.99e-07!42|ontology_enrichment_celltype_v019=CL:0000746;1.22e-44;3!CL:0000342;4.27e-34;1!CL:0002557;4.27e-34;1!CL:0002565;4.27e-34;1!CL:0000737;8.35e-34;4!CL:0000306;1.38e-09;4!CL:0002222;1.38e-09;4!CL:0002224;1.38e-09;4!CL:0002494;2.89e-09;16|ontology_enrichment_celltype_v019_2=CL:0000746,1.91e-44,3;CL:0000513,1.91e-44,3;CL:0002557,5.05e-34,1;CL:0000342,7.06e-34,1;CL:0002565,7.06e-34,1;CL:0000737,1.17e-33,4;CL:0000306,1.22e-09,4;CL:0002222,1.22e-09,4;CL:0002224,1.22e-09,4;CL:0002494,3.14e-09,16|ontology_enrichment_development_v019=CL:0000513;1.22e-44;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004290!3.09e-18!70;UBERON:0001134!5.37e-16!61;UBERON:0002036!5.37e-16!61;UBERON:0003082!5.37e-16!61;UBERON:0002385!2.52e-15!63;UBERON:0001015!2.52e-15!63;UBERON:0000383!2.52e-15!63;UBERON:0000486!1.07e-14!82;UBERON:0000914!1.89e-14!83;UBERON:0002329!1.89e-14!83;UBERON:0003077!1.89e-14!83;UBERON:0003059!1.89e-14!83;UBERON:0007282!1.89e-14!83;UBERON:0009618!1.89e-14!83;UBERON:0007285!1.89e-14!83;UBERON:0000948!5.62e-12!24;UBERON:0005498!5.62e-12!24;UBERON:0004140!5.62e-12!24;UBERON:0009881!5.62e-12!24;UBERON:0004141!5.62e-12!24;UBERON:0003084!5.62e-12!24;UBERON:0007005!5.62e-12!24;UBERON:0004139!5.62e-12!24;UBERON:0004291!5.62e-12!24;UBERON:0000490!6.13e-11!138;UBERON:0000119!1.66e-10!312;UBERON:0007100!2.08e-10!27;UBERON:0000483!2.97e-09!309;UBERON:0005256!3.00e-09!143;UBERON:0000488!7.63e-08!4;UBERON:0004535!8.34e-08!110;UBERON:0000481!8.91e-08!347;UBERON:0001009!1.81e-07!113;UBERON:0007625!2.96e-07!11;UBERON:0002200!3.08e-07!11;UBERON:0006876!3.08e-07!11|ontology_enrichment_uberon_v019=UBERON:0002506;4.27e-34;1!UBERON:0001769;4.27e-34;1!UBERON:0000078;8.34e-18;2!UBERON:0002012;8.34e-18;2!UBERON:0008886;8.34e-18;2!UBERON:0007625;5.10e-13;11!UBERON:0001801;1.90e-10;14!UBERON:0010371;3.90e-10;31!UBERON:0010077;1.38e-09;4!UBERON:0005389;1.38e-09;4!UBERON:0000488;1.38e-09;4!UBERON:0000484;1.38e-09;4!UBERON:0000965;1.38e-09;4!UBERON:0001803;1.38e-09;4!UBERON:0000019;5.93e-08;19!UBERON:0000047;5.93e-08;19!UBERON:0004088;5.93e-08;19!UBERON:0010230;5.93e-08;19!UBERON:0000970;1.33e-07;20!UBERON:0002104;2.77e-07;21!UBERON:0001456;2.77e-07;21!UBERON:0000948;5.40e-07;22!UBERON:0002203;8.25e-07;6!UBERON:0001768;8.25e-07;6!UBERON:0002200;8.25e-07;6!UBERON:0000020;9.95e-07;23|ontology_enrichment_uberon_v019_2=UBERON:0002506,7.06e-34,1;UBERON:0001769,7.06e-34,1;UBERON:0000078,9.07e-18,2;UBERON:0007497,9.07e-18,2;UBERON:0003643,9.07e-18,2;UBERON:0003504,9.07e-18,2;UBERON:0003469,9.07e-18,2;UBERON:0003496,9.07e-18,2;UBERON:0002012,9.07e-18,2;UBERON:0008886,9.07e-18,2;UBERON:0007303,9.07e-18,2;UBERON:0002061,9.07e-18,2;UBERON:0005432,9.07e-18,2;UBERON:0004363,9.07e-18,2;UBERON:0000948,4.28e-13,24;UBERON:0005498,4.28e-13,24;UBERON:0004140,4.28e-13,24;UBERON:0009881,4.28e-13,24;UBERON:0004141,4.28e-13,24;UBERON:0003084,4.28e-13,24;UBERON:0007005,4.28e-13,24;UBERON:0004139,4.28e-13,24;UBERON:0004291,4.28e-13,24;UBERON:0007625,5.10e-13,11;UBERON:0004145,2.59e-12,3;UBERON:0007100,9.99e-12,27;UBERON:0001801,1.90e-10,14;UBERON:0010077,1.22e-09,4;UBERON:0005389,1.22e-09,4;UBERON:0000484,1.22e-09,4;UBERON:0002546,1.22e-09,4;UBERON:0000965,1.22e-09,4;UBERON:0001803,1.22e-09,4;UBERON:0003073,1.22e-09,4;UBERON:0005426,1.22e-09,4;UBERON:0000488,1.57e-09,4;UBERON:0003498,6.55e-08,5;UBERON:0005985,6.55e-08,5;UBERON:0000019,1.33e-07,20;UBERON:0000047,1.33e-07,20;UBERON:0010312,1.33e-07,20;UBERON:0004088,1.33e-07,20;UBERON:0010230,1.33e-07,20;UBERON:0003072,1.33e-07,20;UBERON:0004128,1.33e-07,20;UBERON:0003071,1.33e-07,20;UBERON:0000970,2.77e-07,21;UBERON:0002104,2.77e-07,21;UBERON:0001456,5.40e-07,22;UBERON:0010188,8.48e-07,6;UBERON:0002539,8.48e-07,6;UBERON:0003351,8.48e-07,6;UBERON:0008816,8.48e-07,6;UBERON:0002203,8.97e-07,6;UBERON:0001768,8.97e-07,6;UBERON:0002200,8.97e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93363310619929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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000555233_5end | |||
|description=CAGE_peak_35_at_PRKCH_5end | |||
|id=chr14:61929802..61929817,+ | |||
|ontology_enrichment_celltype=CL:0000680!1.76e-17!57;CL:0000056!1.76e-17!57;CL:0000355!1.76e-17!57;CL:0000187!6.60e-15!54;CL:0000183!2.93e-13!59;CL:0000393!5.80e-13!60;CL:0000211!5.80e-13!60;CL:0000055!1.04e-10!180;CL:0002494!3.70e-09!16;CL:0000188!8.71e-09!9;CL:0000222!1.54e-07!119;CL:0000192!5.99e-07!42;CL:0000514!5.99e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.22e-44;3!CL:0000342;4.27e-34;1!CL:0002557;4.27e-34;1!CL:0002565;4.27e-34;1!CL:0000737;8.35e-34;4!CL:0000306;1.38e-09;4!CL:0002222;1.38e-09;4!CL:0002224;1.38e-09;4!CL:0002494;2.89e-09;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.91e-44,3;CL:0000513,1.91e-44,3;CL:0002557,5.05e-34,1;CL:0000342,7.06e-34,1;CL:0002565,7.06e-34,1;CL:0000737,1.17e-33,4;CL:0000306,1.22e-09,4;CL:0002222,1.22e-09,4;CL:0002224,1.22e-09,4;CL:0002494,3.14e-09,16 | |||
|ontology_enrichment_development_v019=CL:0000513;1.22e-44;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!3.09e-18!70;UBERON:0001134!5.37e-16!61;UBERON:0002036!5.37e-16!61;UBERON:0003082!5.37e-16!61;UBERON:0002385!2.52e-15!63;UBERON:0001015!2.52e-15!63;UBERON:0000383!2.52e-15!63;UBERON:0000486!1.07e-14!82;UBERON:0000914!1.89e-14!83;UBERON:0002329!1.89e-14!83;UBERON:0003077!1.89e-14!83;UBERON:0003059!1.89e-14!83;UBERON:0007282!1.89e-14!83;UBERON:0009618!1.89e-14!83;UBERON:0007285!1.89e-14!83;UBERON:0000948!5.62e-12!24;UBERON:0005498!5.62e-12!24;UBERON:0004140!5.62e-12!24;UBERON:0009881!5.62e-12!24;UBERON:0004141!5.62e-12!24;UBERON:0003084!5.62e-12!24;UBERON:0007005!5.62e-12!24;UBERON:0004139!5.62e-12!24;UBERON:0004291!5.62e-12!24;UBERON:0000490!6.13e-11!138;UBERON:0000119!1.66e-10!312;UBERON:0007100!2.08e-10!27;UBERON:0000483!2.97e-09!309;UBERON:0005256!3.00e-09!143;UBERON:0000488!7.63e-08!4;UBERON:0004535!8.34e-08!110;UBERON:0000481!8.91e-08!347;UBERON:0001009!1.81e-07!113;UBERON:0007625!2.96e-07!11;UBERON:0002200!3.08e-07!11;UBERON:0006876!3.08e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;4.27e-34;1!UBERON:0001769;4.27e-34;1!UBERON:0000078;8.34e-18;2!UBERON:0002012;8.34e-18;2!UBERON:0008886;8.34e-18;2!UBERON:0007625;5.10e-13;11!UBERON:0001801;1.90e-10;14!UBERON:0010371;3.90e-10;31!UBERON:0010077;1.38e-09;4!UBERON:0005389;1.38e-09;4!UBERON:0000488;1.38e-09;4!UBERON:0000484;1.38e-09;4!UBERON:0000965;1.38e-09;4!UBERON:0001803;1.38e-09;4!UBERON:0000019;5.93e-08;19!UBERON:0000047;5.93e-08;19!UBERON:0004088;5.93e-08;19!UBERON:0010230;5.93e-08;19!UBERON:0000970;1.33e-07;20!UBERON:0002104;2.77e-07;21!UBERON:0001456;2.77e-07;21!UBERON:0000948;5.40e-07;22!UBERON:0002203;8.25e-07;6!UBERON:0001768;8.25e-07;6!UBERON:0002200;8.25e-07;6!UBERON:0000020;9.95e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,7.06e-34,1;UBERON:0001769,7.06e-34,1;UBERON:0000078,9.07e-18,2;UBERON:0007497,9.07e-18,2;UBERON:0003643,9.07e-18,2;UBERON:0003504,9.07e-18,2;UBERON:0003469,9.07e-18,2;UBERON:0003496,9.07e-18,2;UBERON:0002012,9.07e-18,2;UBERON:0008886,9.07e-18,2;UBERON:0007303,9.07e-18,2;UBERON:0002061,9.07e-18,2;UBERON:0005432,9.07e-18,2;UBERON:0004363,9.07e-18,2;UBERON:0000948,4.28e-13,24;UBERON:0005498,4.28e-13,24;UBERON:0004140,4.28e-13,24;UBERON:0009881,4.28e-13,24;UBERON:0004141,4.28e-13,24;UBERON:0003084,4.28e-13,24;UBERON:0007005,4.28e-13,24;UBERON:0004139,4.28e-13,24;UBERON:0004291,4.28e-13,24;UBERON:0007625,5.10e-13,11;UBERON:0004145,2.59e-12,3;UBERON:0007100,9.99e-12,27;UBERON:0001801,1.90e-10,14;UBERON:0010077,1.22e-09,4;UBERON:0005389,1.22e-09,4;UBERON:0000484,1.22e-09,4;UBERON:0002546,1.22e-09,4;UBERON:0000965,1.22e-09,4;UBERON:0001803,1.22e-09,4;UBERON:0003073,1.22e-09,4;UBERON:0005426,1.22e-09,4;UBERON:0000488,1.57e-09,4;UBERON:0003498,6.55e-08,5;UBERON:0005985,6.55e-08,5;UBERON:0000019,1.33e-07,20;UBERON:0000047,1.33e-07,20;UBERON:0010312,1.33e-07,20;UBERON:0004088,1.33e-07,20;UBERON:0010230,1.33e-07,20;UBERON:0003072,1.33e-07,20;UBERON:0004128,1.33e-07,20;UBERON:0003071,1.33e-07,20;UBERON:0000970,2.77e-07,21;UBERON:0002104,2.77e-07,21;UBERON:0001456,5.40e-07,22;UBERON:0010188,8.48e-07,6;UBERON:0002539,8.48e-07,6;UBERON:0003351,8.48e-07,6;UBERON:0008816,8.48e-07,6;UBERON:0002203,8.97e-07,6;UBERON:0001768,8.97e-07,6;UBERON:0002200,8.97e-07,6 | |||
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|short_description=p35@PRKCH | |||
}} |
Revision as of 05:00, 11 September 2013
Short description: | p35@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_35_at_PRKCH_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000555233_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.91e-44 | 3 |
cardiac muscle myoblast | 1.91e-44 | 3 |
fibroblast of pulmonary artery | 5.05e-34 | 1 |
pigment cell (sensu Vertebrata) | 7.06e-34 | 1 |
iris pigment epithelial cell | 7.06e-34 | 1 |
striated muscle cell | 1.17e-33 | 4 |
crystallin accumulating cell | 1.22e-09 | 4 |
vertebrate lens cell | 1.22e-09 | 4 |
lens epithelial cell | 1.22e-09 | 4 |
cardiocyte | 3.14e-09 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.