FFCP PHASE1:Hg19::chr15:74495062..74495063,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64220|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30650|TSSclassifier=S|UniProt=F5GYG1|association_with_transcript=32bp_to_ENST00000536129_5end|description=CAGE_peak_13_at_STRA6_5end|id=chr15:74495062..74495063,-|ontology_enrichment_celltype=CL:0000064!1.08e-14!3;CL:0005012!1.08e-14!3;CL:0000067!1.08e-14!3;CL:0002304!1.08e-14!3;CL:0002575!3.97e-10!2;CL:0000075!2.25e-09!27;CL:0000710!1.74e-07!20;CL:0000327!2.36e-07!14;CL:0002586!9.55e-07!3|ontology_enrichment_celltype_v019=CL:0000342;2.39e-66;1!CL:0002565;2.39e-66;1!CL:0000306;8.69e-18;4!CL:0002222;8.69e-18;4!CL:0002224;8.69e-18;4|ontology_enrichment_celltype_v019_2=CL:0000342,2.39e-66,1;CL:0002565,2.39e-66,1;CL:0000306,7.35e-18,4;CL:0002222,7.35e-18,4;CL:0002224,7.35e-18,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!2.29e-25!11;UBERON:0000488!4.36e-19!4;UBERON:0000019!7.60e-18!19;UBERON:0000047!7.60e-18!19;UBERON:0004088!7.60e-18!19;UBERON:0003072!7.60e-18!19;UBERON:0003071!7.60e-18!19;UBERON:0004128!7.60e-18!19;UBERON:0000970!7.22e-17!20;UBERON:0002104!5.53e-16!21;UBERON:0001456!5.53e-16!21;UBERON:0001778!1.08e-14!3;UBERON:0001775!1.08e-14!3;UBERON:0000020!1.91e-14!23;UBERON:0001032!8.97e-14!24;UBERON:0004456!8.97e-14!24;UBERON:0002203!9.54e-13!6;UBERON:0001768!9.54e-13!6;UBERON:0001801!2.33e-11!14;UBERON:0005085!4.15e-11!29;UBERON:0002200!2.58e-10!11;UBERON:0006876!2.58e-10!11;UBERON:0000966!1.61e-08!5;UBERON:0005388!1.61e-08!5;UBERON:0001802!1.61e-08!5;UBERON:0001781!9.55e-07!3;UBERON:0001782!9.55e-07!3;UBERON:0005424!9.55e-07!3|ontology_enrichment_uberon_v019=UBERON:0002506;2.39e-66;1!UBERON:0001769;2.39e-66;1!UBERON:0006562;5.04e-34;2!UBERON:0007625;5.49e-25;11!UBERON:0001801;6.48e-20;14!UBERON:0010077;8.69e-18;4!UBERON:0005389;8.69e-18;4!UBERON:0000488;8.69e-18;4!UBERON:0000484;8.69e-18;4!UBERON:0000965;8.69e-18;4!UBERON:0001803;8.69e-18;4!UBERON:0000019;5.27e-15;19!UBERON:0000047;5.27e-15;19!UBERON:0004088;5.27e-15;19!UBERON:0010230;5.27e-15;19!UBERON:0000970;2.58e-14;20!UBERON:0002104;1.09e-13;21!UBERON:0001456;1.09e-13;21!UBERON:0000020;1.33e-12;23!UBERON:0002203;2.45e-12;6!UBERON:0001768;2.45e-12;6!UBERON:0002200;2.45e-12;6!UBERON:0001032;3.97e-12;24!UBERON:0004456;3.97e-12;24!UBERON:0010371;6.23e-10;31!UBERON:0006876;2.47e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002506,2.39e-66,1;UBERON:0001769,2.39e-66,1;UBERON:0007625,4.86e-25,11;UBERON:0001801,5.89e-20,14;UBERON:0010077,7.35e-18,4;UBERON:0005389,7.35e-18,4;UBERON:0000484,7.35e-18,4;UBERON:0002546,7.35e-18,4;UBERON:0000965,7.35e-18,4;UBERON:0001803,7.35e-18,4;UBERON:0003073,7.35e-18,4;UBERON:0005426,7.35e-18,4;UBERON:0000488,8.69e-18,4;UBERON:0000019,2.41e-14,20;UBERON:0000047,2.41e-14,20;UBERON:0010312,2.41e-14,20;UBERON:0004088,2.41e-14,20;UBERON:0010230,2.41e-14,20;UBERON:0003072,2.41e-14,20;UBERON:0004128,2.41e-14,20;UBERON:0003071,2.41e-14,20;UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0001456,3.77e-13,22;UBERON:0002203,2.45e-12,6;UBERON:0001768,2.45e-12,6;UBERON:0002200,2.45e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24;UBERON:0005085,1.15e-09,31;UBERON:0000076,1.24e-09,8;UBERON:0006876,2.47e-07,11;UBERON:0006562,2.63e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.665188192387692,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,0.231860809950154,1.29149563659404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66465387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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30650 | |||
|TSSclassifier=S | |||
|UniProt=F5GYG1 | |||
|association_with_transcript=32bp_to_ENST00000536129_5end | |||
|description=CAGE_peak_13_at_STRA6_5end | |||
|id=chr15:74495062..74495063,- | |||
|ontology_enrichment_celltype=CL:0000064!1.08e-14!3;CL:0005012!1.08e-14!3;CL:0000067!1.08e-14!3;CL:0002304!1.08e-14!3;CL:0002575!3.97e-10!2;CL:0000075!2.25e-09!27;CL:0000710!1.74e-07!20;CL:0000327!2.36e-07!14;CL:0002586!9.55e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000342;2.39e-66;1!CL:0002565;2.39e-66;1!CL:0000306;8.69e-18;4!CL:0002222;8.69e-18;4!CL:0002224;8.69e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,2.39e-66,1;CL:0002565,2.39e-66,1;CL:0000306,7.35e-18,4;CL:0002222,7.35e-18,4;CL:0002224,7.35e-18,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!2.29e-25!11;UBERON:0000488!4.36e-19!4;UBERON:0000019!7.60e-18!19;UBERON:0000047!7.60e-18!19;UBERON:0004088!7.60e-18!19;UBERON:0003072!7.60e-18!19;UBERON:0003071!7.60e-18!19;UBERON:0004128!7.60e-18!19;UBERON:0000970!7.22e-17!20;UBERON:0002104!5.53e-16!21;UBERON:0001456!5.53e-16!21;UBERON:0001778!1.08e-14!3;UBERON:0001775!1.08e-14!3;UBERON:0000020!1.91e-14!23;UBERON:0001032!8.97e-14!24;UBERON:0004456!8.97e-14!24;UBERON:0002203!9.54e-13!6;UBERON:0001768!9.54e-13!6;UBERON:0001801!2.33e-11!14;UBERON:0005085!4.15e-11!29;UBERON:0002200!2.58e-10!11;UBERON:0006876!2.58e-10!11;UBERON:0000966!1.61e-08!5;UBERON:0005388!1.61e-08!5;UBERON:0001802!1.61e-08!5;UBERON:0001781!9.55e-07!3;UBERON:0001782!9.55e-07!3;UBERON:0005424!9.55e-07!3 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002506,2.39e-66,1;UBERON:0001769,2.39e-66,1;UBERON:0007625,4.86e-25,11;UBERON:0001801,5.89e-20,14;UBERON:0010077,7.35e-18,4;UBERON:0005389,7.35e-18,4;UBERON:0000484,7.35e-18,4;UBERON:0002546,7.35e-18,4;UBERON:0000965,7.35e-18,4;UBERON:0001803,7.35e-18,4;UBERON:0003073,7.35e-18,4;UBERON:0005426,7.35e-18,4;UBERON:0000488,8.69e-18,4;UBERON:0000019,2.41e-14,20;UBERON:0000047,2.41e-14,20;UBERON:0010312,2.41e-14,20;UBERON:0004088,2.41e-14,20;UBERON:0010230,2.41e-14,20;UBERON:0003072,2.41e-14,20;UBERON:0004128,2.41e-14,20;UBERON:0003071,2.41e-14,20;UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0001456,3.77e-13,22;UBERON:0002203,2.45e-12,6;UBERON:0001768,2.45e-12,6;UBERON:0002200,2.45e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24;UBERON:0005085,1.15e-09,31;UBERON:0000076,1.24e-09,8;UBERON:0006876,2.47e-07,11;UBERON:0006562,2.63e-07,11 | |||
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|short_description=p13@STRA6 | |||
}} |
Revision as of 08:13, 11 September 2013
Short description: | p13@STRA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_STRA6_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000536129_5end |
EntrezGene: | STRA6 |
HGNC: | 30650 |
UniProt: | F5GYG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 2.39e-66 | 1 |
iris pigment epithelial cell | 2.39e-66 | 1 |
crystallin accumulating cell | 7.35e-18 | 4 |
vertebrate lens cell | 7.35e-18 | 4 |
lens epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 2.39e-66 | 1 |
iris | 2.39e-66 | 1 |
pigment epithelium of eye | 4.86e-25 | 11 |
anterior segment of eyeball | 5.89e-20 | 14 |
cuboidal epithelium | 7.35e-18 | 4 |
transparent eye structure | 7.35e-18 | 4 |
simple cuboidal epithelium | 7.35e-18 | 4 |
cranial placode | 7.35e-18 | 4 |
lens of camera-type eye | 7.35e-18 | 4 |
epithelium of lens | 7.35e-18 | 4 |
lens placode | 7.35e-18 | 4 |
lens vesicle | 7.35e-18 | 4 |
atypical epithelium | 8.69e-18 | 4 |
camera-type eye | 2.41e-14 | 20 |
simple eye | 2.41e-14 | 20 |
immature eye | 2.41e-14 | 20 |
ocular region | 2.41e-14 | 20 |
eyeball of camera-type eye | 2.41e-14 | 20 |
optic cup | 2.41e-14 | 20 |
optic vesicle | 2.41e-14 | 20 |
eye primordium | 2.41e-14 | 20 |
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
face | 3.77e-13 | 22 |
vasculature of eye | 2.45e-12 | 6 |
uvea | 2.45e-12 | 6 |
vasculature of head | 2.45e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
ectodermal placode | 1.15e-09 | 31 |
external ectoderm | 1.24e-09 | 8 |
vasculature of organ | 2.47e-07 | 11 |
pharynx | 2.63e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.