FFCP PHASE1:Hg19::chr15:75498739..75498752,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56905|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24497|TSSclassifier=W|UniProt=F8WBD1|association_with_transcript=204bp_to_ENST00000446981_5end|coexpression_cluster_id=C13|description=CAGE_peak_11_at_C15orf39_5end|id=chr15:75498739..75498752,+|ontology_enrichment_celltype=CL:0000860!7.80e-31!45;CL:0002057!1.39e-29!42;CL:0000766!5.29e-26!76;CL:0000763!1.28e-23!112;CL:0000049!1.28e-23!112;CL:0002032!2.55e-22!165;CL:0000837!2.55e-22!165;CL:0000738!3.92e-22!140;CL:0000037!1.40e-21!172;CL:0000566!1.40e-21!172;CL:0000557!1.26e-19!71;CL:0000839!2.71e-19!70;CL:0000988!5.77e-19!182;CL:0002194!3.64e-18!63;CL:0000576!3.64e-18!63;CL:0000040!3.64e-18!63;CL:0000559!3.64e-18!63;CL:0002009!6.43e-18!65;CL:0002031!1.55e-16!124;CL:0002087!3.59e-16!119;CL:0000094!1.30e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.27e-61;33!CL:0002057;1.27e-61;33!CL:0000473;5.94e-46;39!CL:0000234;5.94e-46;39!CL:0000576;7.16e-33;48!CL:0000766;9.02e-27;69!CL:0000763;8.29e-18;100!CL:0000775;5.20e-14;3!CL:0000094;1.64e-13;8!CL:0000738;6.14e-10;136!CL:0000081;9.79e-10;11!CL:0000771;1.59e-09;2!CL:0002087;5.65e-09;104|ontology_enrichment_celltype_v019_2=CL:0000860,5.30e-62,42;CL:0002057,5.30e-62,42;CL:0000473,5.29e-58,48;CL:0000234,5.29e-58,48;CL:0000766,6.30e-56,72;CL:0002194,4.59e-45,59;CL:0000576,4.59e-45,59;CL:0000040,4.59e-45,59;CL:0000559,4.59e-45,59;CL:0002009,2.14e-43,61;CL:0000839,7.33e-43,66;CL:0000763,3.88e-42,108;CL:0000049,3.88e-42,108;CL:0000557,3.95e-42,67;CL:0000738,6.99e-32,136;CL:0002032,6.14e-31,161;CL:0000837,6.14e-31,161;CL:0000037,2.68e-29,168;CL:0000988,2.23e-27,177;CL:0002031,4.60e-26,120;CL:0002087,1.62e-25,115;CL:0000775,5.24e-14,3;CL:0000094,1.65e-13,8;CL:0000134,5.29e-11,354;CL:0002320,1.28e-10,361;CL:0000081,9.83e-10,11;CL:0000771,1.59e-09,2;CL:0000219,2.91e-09,386;CL:0000048,1.31e-07,427;CL:0000723,2.22e-07,433;CL:0000034,4.36e-07,441|ontology_enrichment_development_v019=CL:0002057;6.64e-45;42!CL:0000049;6.17e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.24e-21!102;UBERON:0003061!2.24e-21!102;UBERON:0002193!6.90e-21!112;UBERON:0002371!8.03e-17!80;UBERON:0001474!9.57e-16!86;UBERON:0002405!2.49e-15!115;UBERON:0004765!2.90e-13!101;UBERON:0001434!2.90e-13!101;UBERON:0003081!1.08e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.11e-36,76;UBERON:0002390,3.51e-36,98;UBERON:0003061,3.51e-36,98;UBERON:0001474,2.83e-33,82;UBERON:0002193,3.66e-32,108;UBERON:0004765,9.55e-30,90;UBERON:0002405,1.41e-28,93;UBERON:0001434,4.00e-26,100;UBERON:0003081,8.11e-15,203;UBERON:0002204,3.41e-14,167;UBERON:0002384,4.30e-10,371;UBERON:0000926,2.47e-08,315;UBERON:0004120,2.47e-08,315;UBERON:0006603,2.47e-08,315|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.993374274723366,0.738905305049512,1.49550484495991,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.232401601740905,0,0,0,1.80490002723128,0.434021741431704,0,0,0,1.30858414901608,1.51150377475524,0.727752183563449,2.32429036905685,2.05583944010913,2.16794459626573,3.16461631554365,1.0246428261164,0.709446689665756,0.689491361473237,0.645484683583826,1.35426486594342,1.88242339542605,3.82068610080984,0.224723484445085,1.83650335422542,0.641858054152187,3.83602275479425,2.63881040149373,2.39356389145958,1.70489900213078,2.03146467040009,3.97169657283798,2.4912889959823,2.76373531782418,2.60741459210101,1.08594422352558,1.81619850790011,2.20966581592539,1.58231193720442,0.845021145247767,0.425208599930087,0,0.673971786878971,0.300353785683013,0.48217676009124,0.570025487482497,1.59133341759272,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0,0.328875809207352,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0.38474715694639,1.4763109092493,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0.1443664477610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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56905 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24497 | |||
|TSSclassifier=W | |||
|UniProt=F8WBD1 | |||
|association_with_transcript=204bp_to_ENST00000446981_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_11_at_C15orf39_5end | |||
|id=chr15:75498739..75498752,+ | |||
|ontology_enrichment_celltype=CL:0000860!7.80e-31!45;CL:0002057!1.39e-29!42;CL:0000766!5.29e-26!76;CL:0000763!1.28e-23!112;CL:0000049!1.28e-23!112;CL:0002032!2.55e-22!165;CL:0000837!2.55e-22!165;CL:0000738!3.92e-22!140;CL:0000037!1.40e-21!172;CL:0000566!1.40e-21!172;CL:0000557!1.26e-19!71;CL:0000839!2.71e-19!70;CL:0000988!5.77e-19!182;CL:0002194!3.64e-18!63;CL:0000576!3.64e-18!63;CL:0000040!3.64e-18!63;CL:0000559!3.64e-18!63;CL:0002009!6.43e-18!65;CL:0002031!1.55e-16!124;CL:0002087!3.59e-16!119;CL:0000094!1.30e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-61;33!CL:0002057;1.27e-61;33!CL:0000473;5.94e-46;39!CL:0000234;5.94e-46;39!CL:0000576;7.16e-33;48!CL:0000766;9.02e-27;69!CL:0000763;8.29e-18;100!CL:0000775;5.20e-14;3!CL:0000094;1.64e-13;8!CL:0000738;6.14e-10;136!CL:0000081;9.79e-10;11!CL:0000771;1.59e-09;2!CL:0002087;5.65e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.30e-62,42;CL:0002057,5.30e-62,42;CL:0000473,5.29e-58,48;CL:0000234,5.29e-58,48;CL:0000766,6.30e-56,72;CL:0002194,4.59e-45,59;CL:0000576,4.59e-45,59;CL:0000040,4.59e-45,59;CL:0000559,4.59e-45,59;CL:0002009,2.14e-43,61;CL:0000839,7.33e-43,66;CL:0000763,3.88e-42,108;CL:0000049,3.88e-42,108;CL:0000557,3.95e-42,67;CL:0000738,6.99e-32,136;CL:0002032,6.14e-31,161;CL:0000837,6.14e-31,161;CL:0000037,2.68e-29,168;CL:0000988,2.23e-27,177;CL:0002031,4.60e-26,120;CL:0002087,1.62e-25,115;CL:0000775,5.24e-14,3;CL:0000094,1.65e-13,8;CL:0000134,5.29e-11,354;CL:0002320,1.28e-10,361;CL:0000081,9.83e-10,11;CL:0000771,1.59e-09,2;CL:0000219,2.91e-09,386;CL:0000048,1.31e-07,427;CL:0000723,2.22e-07,433;CL:0000034,4.36e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.64e-45;42!CL:0000049;6.17e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.24e-21!102;UBERON:0003061!2.24e-21!102;UBERON:0002193!6.90e-21!112;UBERON:0002371!8.03e-17!80;UBERON:0001474!9.57e-16!86;UBERON:0002405!2.49e-15!115;UBERON:0004765!2.90e-13!101;UBERON:0001434!2.90e-13!101;UBERON:0003081!1.08e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.11e-36,76;UBERON:0002390,3.51e-36,98;UBERON:0003061,3.51e-36,98;UBERON:0001474,2.83e-33,82;UBERON:0002193,3.66e-32,108;UBERON:0004765,9.55e-30,90;UBERON:0002405,1.41e-28,93;UBERON:0001434,4.00e-26,100;UBERON:0003081,8.11e-15,203;UBERON:0002204,3.41e-14,167;UBERON:0002384,4.30e-10,371;UBERON:0000926,2.47e-08,315;UBERON:0004120,2.47e-08,315;UBERON:0006603,2.47e-08,315 | |||
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| |||
|short_description=p11@C15orf39 | |||
}} |
Revision as of 08:18, 11 September 2013
Short description: | p11@C15orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_C15orf39_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 204bp_to_ENST00000446981_5end |
EntrezGene: | C15orf39 |
HGNC: | 24497 |
UniProt: | F8WBD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.30e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.30e-62 | 42 |
defensive cell | 5.29e-58 | 48 |
phagocyte | 5.29e-58 | 48 |
myeloid leukocyte | 6.30e-56 | 72 |
monopoietic cell | 4.59e-45 | 59 |
monocyte | 4.59e-45 | 59 |
monoblast | 4.59e-45 | 59 |
promonocyte | 4.59e-45 | 59 |
macrophage dendritic cell progenitor | 2.14e-43 | 61 |
myeloid lineage restricted progenitor cell | 7.33e-43 | 66 |
myeloid cell | 3.88e-42 | 108 |
common myeloid progenitor | 3.88e-42 | 108 |
granulocyte monocyte progenitor cell | 3.95e-42 | 67 |
leukocyte | 6.99e-32 | 136 |
hematopoietic oligopotent progenitor cell | 6.14e-31 | 161 |
hematopoietic multipotent progenitor cell | 6.14e-31 | 161 |
hematopoietic stem cell | 2.68e-29 | 168 |
hematopoietic cell | 2.23e-27 | 177 |
hematopoietic lineage restricted progenitor cell | 4.60e-26 | 120 |
nongranular leukocyte | 1.62e-25 | 115 |
neutrophil | 5.24e-14 | 3 |
granulocyte | 1.65e-13 | 8 |
mesenchymal cell | 5.29e-11 | 354 |
connective tissue cell | 1.28e-10 | 361 |
blood cell | 9.83e-10 | 11 |
eosinophil | 1.59e-09 | 2 |
motile cell | 2.91e-09 | 386 |
multi fate stem cell | 1.31e-07 | 427 |
somatic stem cell | 2.22e-07 | 433 |
stem cell | 4.36e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.11e-36 | 76 |
hematopoietic system | 3.51e-36 | 98 |
blood island | 3.51e-36 | 98 |
bone element | 2.83e-33 | 82 |
hemolymphoid system | 3.66e-32 | 108 |
skeletal element | 9.55e-30 | 90 |
immune system | 1.41e-28 | 93 |
skeletal system | 4.00e-26 | 100 |
lateral plate mesoderm | 8.11e-15 | 203 |
musculoskeletal system | 3.41e-14 | 167 |
connective tissue | 4.30e-10 | 371 |
mesoderm | 2.47e-08 | 315 |
mesoderm-derived structure | 2.47e-08 | 315 |
presumptive mesoderm | 2.47e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.