FFCP PHASE1:Hg19::chr16:30751907..30751918,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10847|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=16974|TSSclassifier=S|UniProt=|association_with_transcript=-69bp_to_ENST00000483578_5end|coexpression_cluster_id=C2370|description=CAGE_peak_13_at_SRCAP_5end|id=chr16:30751907..30751918,+|ontology_enrichment_celltype=CL:0000066!9.92e-38!254;CL:0002076!6.44e-24!43;CL:0000223!1.60e-15!59;CL:0002368!1.08e-13!13;CL:0000076!1.25e-09!62;CL:0002202!2.97e-09!9;CL:0002632!2.97e-09!9;CL:0002251!3.18e-09!21;CL:0002159!5.27e-09!13;CL:0002077!1.14e-07!33;CL:0002321!2.43e-07!248;CL:0000220!3.98e-07!246|ontology_enrichment_celltype_v019=CL:0002076;3.86e-20;42!CL:0002368;6.30e-20;13!CL:0002202;1.73e-13;9!CL:0002632;1.73e-13;9!CL:0000349;3.00e-13;19!CL:0002577;5.01e-12;3!CL:0002166;4.22e-11;3!CL:0002159;5.22e-11;14!CL:0002621;2.48e-10;3!CL:0000244;2.93e-08;4!CL:0000731;2.93e-08;4!CL:0002097;7.96e-08;2!CL:0002536;7.96e-08;2!CL:0000317;1.94e-07;2!CL:1000448;1.94e-07;2!CL:0002308;1.94e-07;2!CL:0002140;1.94e-07;2|ontology_enrichment_celltype_v019_2=CL:0000066,4.58e-26,253;CL:0002076,1.81e-24,42;CL:0002368,6.29e-20,13;CL:0000223,2.26e-16,58;CL:0002202,2.09e-13,9;CL:0002632,2.09e-13,9;CL:0000349,3.02e-13,19;CL:0002577,5.16e-12,3;CL:0002166,3.41e-11,3;CL:0002159,5.70e-11,14;CL:0002621,9.12e-11,3;CL:0000244,2.32e-08,4;CL:0000731,2.32e-08,4;CL:0002536,7.88e-08,2;CL:0002321,8.64e-08,250;CL:0002097,9.66e-08,2;CL:0000317,1.55e-07,2;CL:1000448,1.55e-07,2;CL:0002308,1.55e-07,2;CL:0002140,1.55e-07,2|ontology_enrichment_development_v019=CL:0000223;1.06e-07;58|ontology_enrichment_disease=DOID:305!1.55e-13!106;DOID:0050687!4.61e-09!143;DOID:299!2.79e-08!25;DOID:1749!9.10e-08!14|ontology_enrichment_disease_v019=DOID:4468;1.94e-07;2|ontology_enrichment_disease_v019_2=DOID:4468,4.13e-07,2|ontology_enrichment_uberon=UBERON:0004119!1.07e-13!169;UBERON:0000925!1.07e-13!169;UBERON:0006595!1.07e-13!169;UBERON:0005631!8.20e-10!14;UBERON:0000158!8.20e-10!14;UBERON:0005911!9.32e-10!82;UBERON:0005153!1.29e-09!37;UBERON:0005157!1.36e-09!51;UBERON:0006554!5.27e-09!44;UBERON:0001008!1.18e-08!45;UBERON:0005156!3.50e-08!59;UBERON:0000990!3.50e-08!59;UBERON:0000464!4.76e-08!104;UBERON:0003100!1.11e-07!41;UBERON:0007196!1.17e-07!14;UBERON:0001558!1.17e-07!14;UBERON:0001007!1.86e-07!155;UBERON:0001555!1.86e-07!155;UBERON:0007026!1.86e-07!155;UBERON:0001004!4.26e-07!72;UBERON:0005177!6.62e-07!107;UBERON:0005178!6.71e-07!34;UBERON:0002224!6.71e-07!34;UBERON:0000466!8.23e-07!126;UBERON:0000077!8.58e-07!130|ontology_enrichment_uberon_v019=UBERON:0000486;7.83e-13;12!UBERON:0001949;2.48e-10;3!UBERON:0000478;4.01e-10;24!UBERON:0005910;1.96e-09;6!UBERON:0001987;4.16e-09;4!UBERON:0004807;1.49e-08;22!UBERON:0001708;2.01e-08;4!UBERON:0008895;2.01e-08;4!UBERON:0005911;2.36e-08;36!UBERON:0005631;2.97e-08;10!UBERON:0000158;2.97e-08;10!UBERON:0000305;5.41e-08;7!UBERON:0007196;8.42e-08;15!UBERON:0001558;8.42e-08;15!UBERON:0002419;1.94e-07;2!UBERON:0007771;1.94e-07;2!UBERON:0003297;1.94e-07;2!UBERON:0001821;1.94e-07;2!UBERON:0003487;1.94e-07;2!UBERON:0001820;1.94e-07;2!UBERON:0011159;8.27e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.63e-15,14;UBERON:0000158,5.63e-15,14;UBERON:0001949,9.12e-11,3;UBERON:0000478,4.02e-10,24;UBERON:0005910,1.53e-09,6;UBERON:0001987,4.25e-09,4;UBERON:0004340,4.25e-09,4;UBERON:0003124,1.22e-08,7;UBERON:0001708,1.72e-08,4;UBERON:0008895,1.72e-08,4;UBERON:0000305,5.76e-08,7;UBERON:0004119,7.78e-08,160;UBERON:0000925,7.78e-08,160;UBERON:0006595,7.78e-08,160;UBERON:0007196,9.37e-08,15;UBERON:0001558,9.37e-08,15;UBERON:0002419,1.55e-07,2;UBERON:0007771,1.55e-07,2;UBERON:0003297,1.55e-07,2;UBERON:0001821,1.55e-07,2;UBERON:0003487,1.55e-07,2;UBERON:0001820,1.55e-07,2;UBERON:0005089,1.55e-07,2;UBERON:0005088,1.55e-07,2;UBERON:0004871,5.72e-07,8;UBERON:0011159,7.31e-07,5;UBERON:0006554,8.33e-07,47;UBERON:0000365,9.27e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,10.4670175195864,1.31064823278103,2.63766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,2.409647350226,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,1.90922284413584,1.72082757233402,0.609868530647977,0,0.232387885739037,0.310983165046111,0.252320850875628,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.98775256867763,3.37205259772859,0.502644862058154,1.20364978706088,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0,0,0.148631162288728,2.81201501960331,1.34385702559088,2.41017665312057,1.70161193135412,1.74380363108377,0.766765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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10847 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16974 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-69bp_to_ENST00000483578_5end | |||
|coexpression_cluster_id=C2370 | |||
|description=CAGE_peak_13_at_SRCAP_5end | |||
|id=chr16:30751907..30751918,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.92e-38!254;CL:0002076!6.44e-24!43;CL:0000223!1.60e-15!59;CL:0002368!1.08e-13!13;CL:0000076!1.25e-09!62;CL:0002202!2.97e-09!9;CL:0002632!2.97e-09!9;CL:0002251!3.18e-09!21;CL:0002159!5.27e-09!13;CL:0002077!1.14e-07!33;CL:0002321!2.43e-07!248;CL:0000220!3.98e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.86e-20;42!CL:0002368;6.30e-20;13!CL:0002202;1.73e-13;9!CL:0002632;1.73e-13;9!CL:0000349;3.00e-13;19!CL:0002577;5.01e-12;3!CL:0002166;4.22e-11;3!CL:0002159;5.22e-11;14!CL:0002621;2.48e-10;3!CL:0000244;2.93e-08;4!CL:0000731;2.93e-08;4!CL:0002097;7.96e-08;2!CL:0002536;7.96e-08;2!CL:0000317;1.94e-07;2!CL:1000448;1.94e-07;2!CL:0002308;1.94e-07;2!CL:0002140;1.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.58e-26,253;CL:0002076,1.81e-24,42;CL:0002368,6.29e-20,13;CL:0000223,2.26e-16,58;CL:0002202,2.09e-13,9;CL:0002632,2.09e-13,9;CL:0000349,3.02e-13,19;CL:0002577,5.16e-12,3;CL:0002166,3.41e-11,3;CL:0002159,5.70e-11,14;CL:0002621,9.12e-11,3;CL:0000244,2.32e-08,4;CL:0000731,2.32e-08,4;CL:0002536,7.88e-08,2;CL:0002321,8.64e-08,250;CL:0002097,9.66e-08,2;CL:0000317,1.55e-07,2;CL:1000448,1.55e-07,2;CL:0002308,1.55e-07,2;CL:0002140,1.55e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;1.06e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.55e-13!106;DOID:0050687!4.61e-09!143;DOID:299!2.79e-08!25;DOID:1749!9.10e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.94e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.13e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.07e-13!169;UBERON:0000925!1.07e-13!169;UBERON:0006595!1.07e-13!169;UBERON:0005631!8.20e-10!14;UBERON:0000158!8.20e-10!14;UBERON:0005911!9.32e-10!82;UBERON:0005153!1.29e-09!37;UBERON:0005157!1.36e-09!51;UBERON:0006554!5.27e-09!44;UBERON:0001008!1.18e-08!45;UBERON:0005156!3.50e-08!59;UBERON:0000990!3.50e-08!59;UBERON:0000464!4.76e-08!104;UBERON:0003100!1.11e-07!41;UBERON:0007196!1.17e-07!14;UBERON:0001558!1.17e-07!14;UBERON:0001007!1.86e-07!155;UBERON:0001555!1.86e-07!155;UBERON:0007026!1.86e-07!155;UBERON:0001004!4.26e-07!72;UBERON:0005177!6.62e-07!107;UBERON:0005178!6.71e-07!34;UBERON:0002224!6.71e-07!34;UBERON:0000466!8.23e-07!126;UBERON:0000077!8.58e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;7.83e-13;12!UBERON:0001949;2.48e-10;3!UBERON:0000478;4.01e-10;24!UBERON:0005910;1.96e-09;6!UBERON:0001987;4.16e-09;4!UBERON:0004807;1.49e-08;22!UBERON:0001708;2.01e-08;4!UBERON:0008895;2.01e-08;4!UBERON:0005911;2.36e-08;36!UBERON:0005631;2.97e-08;10!UBERON:0000158;2.97e-08;10!UBERON:0000305;5.41e-08;7!UBERON:0007196;8.42e-08;15!UBERON:0001558;8.42e-08;15!UBERON:0002419;1.94e-07;2!UBERON:0007771;1.94e-07;2!UBERON:0003297;1.94e-07;2!UBERON:0001821;1.94e-07;2!UBERON:0003487;1.94e-07;2!UBERON:0001820;1.94e-07;2!UBERON:0011159;8.27e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.63e-15,14;UBERON:0000158,5.63e-15,14;UBERON:0001949,9.12e-11,3;UBERON:0000478,4.02e-10,24;UBERON:0005910,1.53e-09,6;UBERON:0001987,4.25e-09,4;UBERON:0004340,4.25e-09,4;UBERON:0003124,1.22e-08,7;UBERON:0001708,1.72e-08,4;UBERON:0008895,1.72e-08,4;UBERON:0000305,5.76e-08,7;UBERON:0004119,7.78e-08,160;UBERON:0000925,7.78e-08,160;UBERON:0006595,7.78e-08,160;UBERON:0007196,9.37e-08,15;UBERON:0001558,9.37e-08,15;UBERON:0002419,1.55e-07,2;UBERON:0007771,1.55e-07,2;UBERON:0003297,1.55e-07,2;UBERON:0001821,1.55e-07,2;UBERON:0003487,1.55e-07,2;UBERON:0001820,1.55e-07,2;UBERON:0005089,1.55e-07,2;UBERON:0005088,1.55e-07,2;UBERON:0004871,5.72e-07,8;UBERON:0011159,7.31e-07,5;UBERON:0006554,8.33e-07,47;UBERON:0000365,9.27e-07,5 | |||
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|short_description=p13@SRCAP | |||
}} |
Revision as of 10:11, 11 September 2013
Short description: | p13@SRCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SRCAP_5end |
Coexpression cluster: | C2370_Placental_Alveolar_Urothelial_Amniotic_renal_serous_amniotic |
Association with transcript: | -69bp_to_ENST00000483578_5end |
EntrezGene: | SRCAP |
HGNC: | 16974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.58e-26 | 253 |
endo-epithelial cell | 1.81e-24 | 42 |
respiratory epithelial cell | 6.29e-20 | 13 |
endodermal cell | 2.26e-16 | 58 |
epithelial cell of tracheobronchial tree | 2.09e-13 | 9 |
epithelial cell of lower respiratory tract | 2.09e-13 | 9 |
extraembryonic cell | 3.02e-13 | 19 |
placental epithelial cell | 5.16e-12 | 3 |
epithelial cell of Malassez | 3.41e-11 | 3 |
general ecto-epithelial cell | 5.70e-11 | 14 |
gingival epithelial cell | 9.12e-11 | 3 |
transitional epithelial cell | 2.32e-08 | 4 |
urothelial cell | 2.32e-08 | 4 |
amniotic epithelial cell | 7.88e-08 | 2 |
embryonic cell | 8.64e-08 | 250 |
cortical cell of adrenal gland | 9.66e-08 | 2 |
sebum secreting cell | 1.55e-07 | 2 |
epithelial cell of sweat gland | 1.55e-07 | 2 |
epithelial cell of skin gland | 1.55e-07 | 2 |
acinar cell of sebaceous gland | 1.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.63e-15 | 14 |
membranous layer | 5.63e-15 | 14 |
gingival epithelium | 9.12e-11 | 3 |
extraembryonic structure | 4.02e-10 | 24 |
transitional epithelium | 1.53e-09 | 6 |
placenta | 4.25e-09 | 4 |
allantois | 4.25e-09 | 4 |
chorion | 1.22e-08 | 7 |
jaw skeleton | 1.72e-08 | 4 |
splanchnocranium | 1.72e-08 | 4 |
amnion | 5.76e-08 | 7 |
endoderm-derived structure | 7.78e-08 | 160 |
endoderm | 7.78e-08 | 160 |
presumptive endoderm | 7.78e-08 | 160 |
tracheobronchial tree | 9.37e-08 | 15 |
lower respiratory tract | 9.37e-08 | 15 |
skin gland | 1.55e-07 | 2 |
epidermis gland | 1.55e-07 | 2 |
gland of integumental system | 1.55e-07 | 2 |
sebaceous gland | 1.55e-07 | 2 |
skin sebaceous gland | 1.55e-07 | 2 |
sweat gland | 1.55e-07 | 2 |
sweat gland placode | 1.55e-07 | 2 |
sebaceous gland placode | 1.55e-07 | 2 |
somatic layer of lateral plate mesoderm | 5.72e-07 | 8 |
primary subdivision of cranial skeletal system | 7.31e-07 | 5 |
urinary system structure | 8.33e-07 | 47 |
urothelium | 9.27e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.13e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.