FFCP PHASE1:Hg19::chr16:46782248..46782263,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=91807|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29826|TSSclassifier=W|UniProt=Q32MK0|association_with_transcript=-27bp_to_ENST00000394809,NM_182493,uc002eei.3_5end|coexpression_cluster_id=C20|description=CAGE_peak_1_at_MYLK3_5end|id=chr16:46782248..46782263,-|ontology_enrichment_celltype=CL:0000039!3.18e-08!7;CL:0000586!3.18e-08!7|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;1.12e-20;4!UBERON:0007284;1.12e-20;4!UBERON:0010226;2.16e-10;1!UBERON:0004140;2.59e-10;1!UBERON:0010227;3.10e-10;1!UBERON:0000358;3.40e-10;1!UBERON:0003104;6.56e-07;31|ontology_enrichment_disease=DOID:114!9.91e-09!2|ontology_enrichment_disease_v019=DOID:114;3.28e-19;2!DOID:178;1.89e-10;1!DOID:326;1.89e-10;1!DOID:3978;1.89e-10;1!DOID:3394;1.89e-10;1!DOID:5844;1.89e-10;1!DOID:1287;4.55e-10;4!DOID:1799;4.85e-10;1!DOID:10165;4.85e-10;1!DOID:1798;4.85e-10;1|ontology_enrichment_disease_v019_2=DOID:114,3.43e-19,2;DOID:178,1.98e-10,1;DOID:326,1.98e-10,1;DOID:3978,1.98e-10,1;DOID:3394,1.98e-10,1;DOID:5844,1.98e-10,1;DOID:1287,4.65e-10,4;DOID:1799,4.85e-10,1;DOID:10165,4.85e-10,1;DOID:1798,4.85e-10,1|ontology_enrichment_uberon=UBERON:0007100!3.44e-14!27;UBERON:0003978!4.78e-12!3;UBERON:0009751!4.78e-12!3;UBERON:0000946!4.78e-12!3;UBERON:0002523!4.78e-12!3;UBERON:0005983!4.78e-12!3;UBERON:0002165!4.78e-12!3;UBERON:0002062!4.78e-12!3;UBERON:0007280!4.78e-12!3;UBERON:0004151!5.32e-12!3;UBERON:0003103!7.65e-11!69;UBERON:0002133!1.59e-08!2;UBERON:0002081!1.65e-08!2;UBERON:0000948!2.21e-08!24;UBERON:0005498!2.21e-08!24;UBERON:0004140!2.21e-08!24;UBERON:0009881!2.21e-08!24;UBERON:0004141!2.21e-08!24;UBERON:0003084!2.21e-08!24;UBERON:0007005!2.21e-08!24;UBERON:0004139!2.21e-08!24;UBERON:0004291!2.21e-08!24;UBERON:0000341!1.25e-07!2|ontology_enrichment_uberon_v019=UBERON:0007100;1.06e-27;25!UBERON:0003978;2.39e-27;3!UBERON:0000946;2.39e-27;3!UBERON:0004151;2.98e-27;3!UBERON:0002133;1.10e-18;2!UBERON:0002081;1.20e-18;2!UBERON:0000948;3.59e-14;22!UBERON:0002146;1.89e-10;1!UBERON:0005623;1.89e-10;1!UBERON:0002084;2.16e-10;1!UBERON:0002082;2.16e-10;1!UBERON:0002135;2.84e-10;1!UBERON:0002079;3.10e-10;1!UBERON:0002134;3.71e-10;1!UBERON:0005208;3.71e-10;1!UBERON:0004145;3.71e-10;1!UBERON:0005946;3.71e-10;1!UBERON:0005965;3.71e-10;1!UBERON:0002078;3.71e-10;1!UBERON:0007029;6.61e-10;1!UBERON:0003103;1.14e-08;61!UBERON:0010313;1.35e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.28e-27,3;UBERON:0009751,2.28e-27,3;UBERON:0000946,2.28e-27,3;UBERON:0002523,2.28e-27,3;UBERON:0005983,2.28e-27,3;UBERON:0002165,2.28e-27,3;UBERON:0002062,2.28e-27,3;UBERON:0007280,2.28e-27,3;UBERON:0004151,2.98e-27,3;UBERON:0007100,1.48e-25,27;UBERON:0002133,1.10e-18,2;UBERON:0002081,1.20e-18,2;UBERON:0010227,1.20e-18,2;UBERON:0003103,1.04e-16,68;UBERON:0000948,5.88e-13,24;UBERON:0005498,5.88e-13,24;UBERON:0004140,5.88e-13,24;UBERON:0009881,5.88e-13,24;UBERON:0004141,5.88e-13,24;UBERON:0003084,5.88e-13,24;UBERON:0007005,5.88e-13,24;UBERON:0004139,5.88e-13,24;UBERON:0004291,5.88e-13,24;UBERON:0004797,4.49e-12,7;UBERON:0002146,1.80e-10,1;UBERON:0005623,1.80e-10,1;UBERON:0002084,2.16e-10,1;UBERON:0002082,2.16e-10,1;UBERON:0010226,2.16e-10,1;UBERON:0002135,2.84e-10,1;UBERON:0002079,3.10e-10,1;UBERON:0002134,3.71e-10,1;UBERON:0005208,3.71e-10,1;UBERON:0005946,3.71e-10,1;UBERON:0005965,3.71e-10,1;UBERON:0002078,3.71e-10,1;UBERON:0007029,5.79e-10,1;UBERON:0010313,1.33e-08,10;UBERON:0002342,1.33e-08,10;UBERON:0005062,1.33e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980446171670911,0,0,0,0.922255617552241,6.64206568632314,9.99555821682474,0,0,0,0,0,0.166211681900156,0.225595660617181,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=91807 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29826 | |||
|TSSclassifier=W | |||
|UniProt=Q32MK0 | |||
|association_with_transcript=-27bp_to_ENST00000394809,NM_182493,uc002eei.3_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_MYLK3_5end | |||
|id=chr16:46782248..46782263,- | |||
|ontology_enrichment_celltype=CL:0000039!3.18e-08!7;CL:0000586!3.18e-08!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.12e-20;4!UBERON:0007284;1.12e-20;4!UBERON:0010226;2.16e-10;1!UBERON:0004140;2.59e-10;1!UBERON:0010227;3.10e-10;1!UBERON:0000358;3.40e-10;1!UBERON:0003104;6.56e-07;31 | |||
|ontology_enrichment_disease=DOID:114!9.91e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.28e-19;2!DOID:178;1.89e-10;1!DOID:326;1.89e-10;1!DOID:3978;1.89e-10;1!DOID:3394;1.89e-10;1!DOID:5844;1.89e-10;1!DOID:1287;4.55e-10;4!DOID:1799;4.85e-10;1!DOID:10165;4.85e-10;1!DOID:1798;4.85e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.43e-19,2;DOID:178,1.98e-10,1;DOID:326,1.98e-10,1;DOID:3978,1.98e-10,1;DOID:3394,1.98e-10,1;DOID:5844,1.98e-10,1;DOID:1287,4.65e-10,4;DOID:1799,4.85e-10,1;DOID:10165,4.85e-10,1;DOID:1798,4.85e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.44e-14!27;UBERON:0003978!4.78e-12!3;UBERON:0009751!4.78e-12!3;UBERON:0000946!4.78e-12!3;UBERON:0002523!4.78e-12!3;UBERON:0005983!4.78e-12!3;UBERON:0002165!4.78e-12!3;UBERON:0002062!4.78e-12!3;UBERON:0007280!4.78e-12!3;UBERON:0004151!5.32e-12!3;UBERON:0003103!7.65e-11!69;UBERON:0002133!1.59e-08!2;UBERON:0002081!1.65e-08!2;UBERON:0000948!2.21e-08!24;UBERON:0005498!2.21e-08!24;UBERON:0004140!2.21e-08!24;UBERON:0009881!2.21e-08!24;UBERON:0004141!2.21e-08!24;UBERON:0003084!2.21e-08!24;UBERON:0007005!2.21e-08!24;UBERON:0004139!2.21e-08!24;UBERON:0004291!2.21e-08!24;UBERON:0000341!1.25e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.06e-27;25!UBERON:0003978;2.39e-27;3!UBERON:0000946;2.39e-27;3!UBERON:0004151;2.98e-27;3!UBERON:0002133;1.10e-18;2!UBERON:0002081;1.20e-18;2!UBERON:0000948;3.59e-14;22!UBERON:0002146;1.89e-10;1!UBERON:0005623;1.89e-10;1!UBERON:0002084;2.16e-10;1!UBERON:0002082;2.16e-10;1!UBERON:0002135;2.84e-10;1!UBERON:0002079;3.10e-10;1!UBERON:0002134;3.71e-10;1!UBERON:0005208;3.71e-10;1!UBERON:0004145;3.71e-10;1!UBERON:0005946;3.71e-10;1!UBERON:0005965;3.71e-10;1!UBERON:0002078;3.71e-10;1!UBERON:0007029;6.61e-10;1!UBERON:0003103;1.14e-08;61!UBERON:0010313;1.35e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.28e-27,3;UBERON:0009751,2.28e-27,3;UBERON:0000946,2.28e-27,3;UBERON:0002523,2.28e-27,3;UBERON:0005983,2.28e-27,3;UBERON:0002165,2.28e-27,3;UBERON:0002062,2.28e-27,3;UBERON:0007280,2.28e-27,3;UBERON:0004151,2.98e-27,3;UBERON:0007100,1.48e-25,27;UBERON:0002133,1.10e-18,2;UBERON:0002081,1.20e-18,2;UBERON:0010227,1.20e-18,2;UBERON:0003103,1.04e-16,68;UBERON:0000948,5.88e-13,24;UBERON:0005498,5.88e-13,24;UBERON:0004140,5.88e-13,24;UBERON:0009881,5.88e-13,24;UBERON:0004141,5.88e-13,24;UBERON:0003084,5.88e-13,24;UBERON:0007005,5.88e-13,24;UBERON:0004139,5.88e-13,24;UBERON:0004291,5.88e-13,24;UBERON:0004797,4.49e-12,7;UBERON:0002146,1.80e-10,1;UBERON:0005623,1.80e-10,1;UBERON:0002084,2.16e-10,1;UBERON:0002082,2.16e-10,1;UBERON:0010226,2.16e-10,1;UBERON:0002135,2.84e-10,1;UBERON:0002079,3.10e-10,1;UBERON:0002134,3.71e-10,1;UBERON:0005208,3.71e-10,1;UBERON:0005946,3.71e-10,1;UBERON:0005965,3.71e-10,1;UBERON:0002078,3.71e-10,1;UBERON:0007029,5.79e-10,1;UBERON:0010313,1.33e-08,10;UBERON:0002342,1.33e-08,10;UBERON:0005062,1.33e-08,10 | |||
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|short_description=p1@MYLK3 | |||
}} |
Revision as of 10:27, 11 September 2013
Short description: | p1@MYLK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MYLK3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -27bp_to_ENST00000394809, NM_182493, uc002eei.3_5end |
EntrezGene: | MYLK3 |
HGNC: | 29826 |
UniProt: | Q32MK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.43e-19 | 2 |
vascular disease | 1.98e-10 | 1 |
ischemia | 1.98e-10 | 1 |
extrinsic cardiomyopathy | 1.98e-10 | 1 |
myocardial ischemia | 1.98e-10 | 1 |
myocardial infarction | 1.98e-10 | 1 |
cardiovascular system disease | 4.65e-10 | 4 |
islet cell tumor | 4.85e-10 | 1 |
endocrine pancreas cancer | 4.85e-10 | 1 |
pancreatic endocrine carcinoma | 4.85e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.