FFCP PHASE1:Hg19::chr18:61558795..61558815,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5055|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=8584|TSSclassifier=S|UniProt=|association_with_transcript=116bp_to_AB527561,DQ892867,DQ896116_5end|coexpression_cluster_id=C0|description=CAGE_peak_6_at_SERPINB2_5end|id=chr18:61558795..61558815,+|ontology_enrichment_celltype=CL:0002057!1.01e-40!42;CL:0000860!2.02e-37!45;CL:0002009!1.12e-26!65;CL:0002194!1.02e-25!63;CL:0000576!1.02e-25!63;CL:0000040!1.02e-25!63;CL:0000559!1.02e-25!63;CL:0000557!1.06e-23!71;CL:0000766!3.53e-23!76;CL:0000839!2.53e-22!70;CL:0000763!2.47e-16!112;CL:0000049!2.47e-16!112;CL:0002031!6.85e-12!124;CL:0002087!1.02e-11!119;CL:0000738!2.82e-11!140;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165;CL:0000037!6.07e-09!172;CL:0000566!6.07e-09!172;CL:0000988!5.64e-08!182|ontology_enrichment_celltype_v019=CL:0000860;8.40e-90;33!CL:0002057;8.40e-90;33!CL:0000473;3.85e-63;39!CL:0000234;3.85e-63;39!CL:0000576;5.90e-41;48!CL:0000766;5.52e-22;69!CL:0000763;1.01e-15;100!CL:0002087;2.09e-14;104!CL:0000738;7.79e-07;136!CL:0000219;8.46e-07;193|ontology_enrichment_celltype_v019_2=CL:0000860,1.78e-79,42;CL:0002057,1.78e-79,42;CL:0000473,3.50e-69,48;CL:0000234,3.50e-69,48;CL:0002194,9.18e-55,59;CL:0000576,9.18e-55,59;CL:0000040,9.18e-55,59;CL:0000559,9.18e-55,59;CL:0002009,6.67e-53,61;CL:0000839,9.83e-49,66;CL:0000557,5.66e-48,67;CL:0000766,1.75e-44,72;CL:0000763,8.69e-29,108;CL:0000049,8.69e-29,108;CL:0002087,7.29e-27,115;CL:0002031,1.26e-25,120;CL:0000738,2.89e-22,136;CL:0002032,2.44e-18,161;CL:0000837,2.44e-18,161;CL:0000037,1.90e-17,168;CL:0000988,2.11e-16,177;CL:0000134,1.66e-08,354;CL:0002320,2.84e-08,361;CL:0000219,1.90e-07,386|ontology_enrichment_development_v019=CL:0002057;3.29e-57;42!CL:0000049;6.67e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;4.85e-10;1|ontology_enrichment_disease_v019_2=DOID:2513,4.44e-10,1|ontology_enrichment_uberon=UBERON:0002371!4.41e-20!80;UBERON:0001474!2.04e-19!86;UBERON:0004765!2.91e-15!101;UBERON:0001434!2.91e-15!101;UBERON:0002390!5.77e-14!102;UBERON:0003061!5.77e-14!102;UBERON:0002193!6.15e-13!112;UBERON:0002405!2.19e-12!115;UBERON:0002204!4.22e-11!167;UBERON:0003081!2.28e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.12e-42,76;UBERON:0001474,9.21e-39,82;UBERON:0004765,4.35e-35,90;UBERON:0002405,7.16e-34,93;UBERON:0002390,5.25e-32,98;UBERON:0003061,5.25e-32,98;UBERON:0001434,2.60e-31,100;UBERON:0002193,8.69e-29,108;UBERON:0002204,1.43e-17,167;UBERON:0003081,1.41e-15,203;UBERON:0000926,7.52e-09,315;UBERON:0004120,7.52e-09,315;UBERON:0006603,7.52e-09,315;UBERON:0002384,5.92e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0.377875943688809,0,0.929716147622738,0.411167888021826,0.309706370895104,12.6584652621746,2.56160706529101,1.41889337933151,10.6871161028352,5.16387746867061,8.12558919566051,0.752969358170419,0,0,8.26426509401437,3.53021929783703,8.31138263538754,2.63881040149373,2.19410023383795,0,10.447532590629,4.53908179752912,9.9651559839292,5.02497330513487,1.5644487552606,1.73751075764093,9.08099253950053,5.89244217580104,4.1140110367315,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703702806881416,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,0,0.921482106297696,0,0,0,0.16480387422676,0,0,0,0,0,0,4.66559381492711,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5055 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8584 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=116bp_to_AB527561,DQ892867,DQ896116_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_SERPINB2_5end | |||
|id=chr18:61558795..61558815,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.01e-40!42;CL:0000860!2.02e-37!45;CL:0002009!1.12e-26!65;CL:0002194!1.02e-25!63;CL:0000576!1.02e-25!63;CL:0000040!1.02e-25!63;CL:0000559!1.02e-25!63;CL:0000557!1.06e-23!71;CL:0000766!3.53e-23!76;CL:0000839!2.53e-22!70;CL:0000763!2.47e-16!112;CL:0000049!2.47e-16!112;CL:0002031!6.85e-12!124;CL:0002087!1.02e-11!119;CL:0000738!2.82e-11!140;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165;CL:0000037!6.07e-09!172;CL:0000566!6.07e-09!172;CL:0000988!5.64e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.40e-90;33!CL:0002057;8.40e-90;33!CL:0000473;3.85e-63;39!CL:0000234;3.85e-63;39!CL:0000576;5.90e-41;48!CL:0000766;5.52e-22;69!CL:0000763;1.01e-15;100!CL:0002087;2.09e-14;104!CL:0000738;7.79e-07;136!CL:0000219;8.46e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.78e-79,42;CL:0002057,1.78e-79,42;CL:0000473,3.50e-69,48;CL:0000234,3.50e-69,48;CL:0002194,9.18e-55,59;CL:0000576,9.18e-55,59;CL:0000040,9.18e-55,59;CL:0000559,9.18e-55,59;CL:0002009,6.67e-53,61;CL:0000839,9.83e-49,66;CL:0000557,5.66e-48,67;CL:0000766,1.75e-44,72;CL:0000763,8.69e-29,108;CL:0000049,8.69e-29,108;CL:0002087,7.29e-27,115;CL:0002031,1.26e-25,120;CL:0000738,2.89e-22,136;CL:0002032,2.44e-18,161;CL:0000837,2.44e-18,161;CL:0000037,1.90e-17,168;CL:0000988,2.11e-16,177;CL:0000134,1.66e-08,354;CL:0002320,2.84e-08,361;CL:0000219,1.90e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.29e-57;42!CL:0000049;6.67e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;4.85e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.44e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.41e-20!80;UBERON:0001474!2.04e-19!86;UBERON:0004765!2.91e-15!101;UBERON:0001434!2.91e-15!101;UBERON:0002390!5.77e-14!102;UBERON:0003061!5.77e-14!102;UBERON:0002193!6.15e-13!112;UBERON:0002405!2.19e-12!115;UBERON:0002204!4.22e-11!167;UBERON:0003081!2.28e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.12e-42,76;UBERON:0001474,9.21e-39,82;UBERON:0004765,4.35e-35,90;UBERON:0002405,7.16e-34,93;UBERON:0002390,5.25e-32,98;UBERON:0003061,5.25e-32,98;UBERON:0001434,2.60e-31,100;UBERON:0002193,8.69e-29,108;UBERON:0002204,1.43e-17,167;UBERON:0003081,1.41e-15,203;UBERON:0000926,7.52e-09,315;UBERON:0004120,7.52e-09,315;UBERON:0006603,7.52e-09,315;UBERON:0002384,5.92e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0.377875943688809,0,0.929716147622738,0.411167888021826,0.309706370895104,12.6584652621746,2.56160706529101,1.41889337933151,10.6871161028352,5.16387746867061,8.12558919566051,0.752969358170419,0,0,8.26426509401437,3.53021929783703,8.31138263538754,2.63881040149373,2.19410023383795,0,10.447532590629,4.53908179752912,9.9651559839292,5.02497330513487,1.5644487552606,1.73751075764093,9.08099253950053,5.89244217580104,4.1140110367315,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703702806881416,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,0,0.921482106297696,0,0,0,0.16480387422676,0,0,0,0,0,0,4.66559381492711,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.300515217994437,2.66563648518157,0.813741466409323,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p6@SERPINB2 | |||
}} |
Revision as of 18:02, 11 September 2013
Short description: | p6@SERPINB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SERPINB2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 116bp_to_AB527561, DQ892867, DQ896116_5end |
EntrezGene: | SERPINB2 |
HGNC: | 8584 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.78e-79 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.78e-79 | 42 |
defensive cell | 3.50e-69 | 48 |
phagocyte | 3.50e-69 | 48 |
monopoietic cell | 9.18e-55 | 59 |
monocyte | 9.18e-55 | 59 |
monoblast | 9.18e-55 | 59 |
promonocyte | 9.18e-55 | 59 |
macrophage dendritic cell progenitor | 6.67e-53 | 61 |
myeloid lineage restricted progenitor cell | 9.83e-49 | 66 |
granulocyte monocyte progenitor cell | 5.66e-48 | 67 |
myeloid leukocyte | 1.75e-44 | 72 |
myeloid cell | 8.69e-29 | 108 |
common myeloid progenitor | 8.69e-29 | 108 |
nongranular leukocyte | 7.29e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-25 | 120 |
leukocyte | 2.89e-22 | 136 |
hematopoietic oligopotent progenitor cell | 2.44e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-18 | 161 |
hematopoietic stem cell | 1.90e-17 | 168 |
hematopoietic cell | 2.11e-16 | 177 |
mesenchymal cell | 1.66e-08 | 354 |
connective tissue cell | 2.84e-08 | 361 |
motile cell | 1.90e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.12e-42 | 76 |
bone element | 9.21e-39 | 82 |
skeletal element | 4.35e-35 | 90 |
immune system | 7.16e-34 | 93 |
hematopoietic system | 5.25e-32 | 98 |
blood island | 5.25e-32 | 98 |
skeletal system | 2.60e-31 | 100 |
hemolymphoid system | 8.69e-29 | 108 |
musculoskeletal system | 1.43e-17 | 167 |
lateral plate mesoderm | 1.41e-15 | 203 |
mesoderm | 7.52e-09 | 315 |
mesoderm-derived structure | 7.52e-09 | 315 |
presumptive mesoderm | 7.52e-09 | 315 |
connective tissue | 5.92e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.44e-10 | 1 |
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