FFCP PHASE1:Hg19::chr19:54377553..54377565,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C482|description=CAGE_peak_at_chr19:54377553..54377565,+|id=chr19:54377553..54377565,+|ontology_enrichment_celltype=CL:0002057!1.26e-17!42;CL:0000766!4.68e-15!76;CL:0000860!5.27e-15!45;CL:0000557!4.02e-12!71;CL:0002009!4.56e-11!65;CL:0000839!5.75e-11!70;CL:0002194!2.09e-10!63;CL:0000576!2.09e-10!63;CL:0000040!2.09e-10!63;CL:0000559!2.09e-10!63;CL:0000048!2.39e-09!430;CL:0000763!4.34e-09!112;CL:0000049!4.34e-09!112;CL:0000034!5.96e-09!444;CL:0000723!1.20e-08!436;CL:0000134!1.46e-08!358;CL:0002320!1.46e-07!365|ontology_enrichment_celltype_v019=CL:0000860;9.21e-41;33!CL:0002057;9.21e-41;33!CL:0000473;1.98e-32;39!CL:0000234;1.98e-32;39!CL:0000766;1.53e-18;69!CL:0000576;9.47e-18;48!CL:0000094;5.30e-12;8!CL:0000081;1.18e-10;11!CL:0000763;1.19e-09;100!CL:0000775;1.13e-07;3!CL:0000097;3.59e-07;5|ontology_enrichment_celltype_v019_2=CL:0000766,1.21e-38,72;CL:0000860,9.53e-34,42;CL:0002057,9.53e-34,42;CL:0000473,9.70e-33,48;CL:0000234,9.70e-33,48;CL:0000839,5.18e-28,66;CL:0000557,1.96e-27,67;CL:0002194,3.41e-24,59;CL:0000576,3.41e-24,59;CL:0000040,3.41e-24,59;CL:0000559,3.41e-24,59;CL:0002009,4.25e-23,61;CL:0000763,1.66e-21,108;CL:0000049,1.66e-21,108;CL:0000738,1.80e-15,136;CL:0000134,1.44e-13,354;CL:0000048,5.80e-13,427;CL:0002320,6.39e-13,361;CL:0000723,1.76e-12,433;CL:0000034,1.86e-12,441;CL:0000094,3.07e-12,8;CL:0002031,1.15e-11,120;CL:0002032,3.05e-11,161;CL:0000837,3.05e-11,161;CL:0000081,9.19e-11,11;CL:0000219,1.14e-10,386;CL:0000037,2.64e-10,168;CL:0000988,7.78e-10,177;CL:0002087,6.45e-09,115;CL:0000775,1.14e-07,3;CL:0000097,2.41e-07,5;CL:0002028,2.41e-07,5|ontology_enrichment_development_v019=CL:0002057;2.57e-25;42!CL:0000049;2.67e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!3.52e-11!216;UBERON:0002371!2.03e-10!80;UBERON:0001474!1.94e-09!86;UBERON:0002390!5.32e-09!102;UBERON:0003061!5.32e-09!102;UBERON:0004765!8.98e-09!101;UBERON:0001434!8.98e-09!101;UBERON:0002204!4.64e-08!167;UBERON:0002193!7.51e-08!112;UBERON:0002384!1.02e-07!375;UBERON:0000926!5.03e-07!448;UBERON:0004120!5.03e-07!448;UBERON:0006603!5.03e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-24,76;UBERON:0001474,4.28e-23,82;UBERON:0004765,4.54e-20,90;UBERON:0002405,2.63e-19,93;UBERON:0002390,1.10e-18,98;UBERON:0003061,1.10e-18,98;UBERON:0001434,3.64e-18,100;UBERON:0002193,3.93e-17,108;UBERON:0003081,1.90e-15,203;UBERON:0002204,5.89e-13,167;UBERON:0002384,1.30e-12,371;UBERON:0000926,2.61e-10,315;UBERON:0004120,2.61e-10,315;UBERON:0006603,2.61e-10,315|phase1_expression=1.45342703416445,1.49870366723688,1.9733616573436,0,0.893922188854576,0.872338524100369,0,0,0,0.737201809504527,0.697801167972428,0.218441372130172,0,0,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,2.36018566109342,1.53531759238885,1.39334510984468,0,0.6024118375565,0,0,0,0,0,0.601633342410425,0,0,0,0,5.67053131240302,3.40088349319928,3.39617685662943,4.41615170120801,2.87817521615278,1.85823822537062,3.74000110018796,1.2808035326455,0.236482229888585,3.10271112662957,1.29096936716765,2.70852973188684,3.57660445130949,1.36453075028923,2.24723484445085,7.03992952453076,4.8139354061414,5.75403413219137,2.30895910130701,3.19141852194611,2.13112375266347,6.38460324982885,1.13477044938228,4.9825779919646,3.26623264833766,2.08593167368081,0.868755378820466,4.23779651843358,4.41933163185078,1.58231193720442,0.633765858935825,0.425208599930087,0.209658645508376,0.44931452458598,0.600707571366025,1.12507910687956,0.285012743741249,0,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,1.32171328579026,0.560508562981536,0,0.590129310341499,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.384273959177026,0,0,0,0.579606171470105,0,0,0,0.339928028092699,0,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.267440195783507,0.434473211648397,2.43806866313962,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.351339142772504,0.196468613246569,0,0,0.649094787309367,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0.56530794192401,0.838998872419812,0,0.417989933073621,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,2.63560834872127,0,0.436094052142534,0.993943903390637,1.2663051166458,0.397227542439656,3.15520282823695,1.06400514659507,0,1.06748995729705,0.74000264525148,0.622422070799533,0.404132016209064,0,0.151357427644931,0,0,0,1.1409436430889,0.896692083310806,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0.103325781175765,2.37600571456411,1.23633464639278,0,2.8744725672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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C482 | |||
|description=CAGE_peak_at_chr19:54377553..54377565,+ | |||
|id=chr19:54377553..54377565,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.26e-17!42;CL:0000766!4.68e-15!76;CL:0000860!5.27e-15!45;CL:0000557!4.02e-12!71;CL:0002009!4.56e-11!65;CL:0000839!5.75e-11!70;CL:0002194!2.09e-10!63;CL:0000576!2.09e-10!63;CL:0000040!2.09e-10!63;CL:0000559!2.09e-10!63;CL:0000048!2.39e-09!430;CL:0000763!4.34e-09!112;CL:0000049!4.34e-09!112;CL:0000034!5.96e-09!444;CL:0000723!1.20e-08!436;CL:0000134!1.46e-08!358;CL:0002320!1.46e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.21e-41;33!CL:0002057;9.21e-41;33!CL:0000473;1.98e-32;39!CL:0000234;1.98e-32;39!CL:0000766;1.53e-18;69!CL:0000576;9.47e-18;48!CL:0000094;5.30e-12;8!CL:0000081;1.18e-10;11!CL:0000763;1.19e-09;100!CL:0000775;1.13e-07;3!CL:0000097;3.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.21e-38,72;CL:0000860,9.53e-34,42;CL:0002057,9.53e-34,42;CL:0000473,9.70e-33,48;CL:0000234,9.70e-33,48;CL:0000839,5.18e-28,66;CL:0000557,1.96e-27,67;CL:0002194,3.41e-24,59;CL:0000576,3.41e-24,59;CL:0000040,3.41e-24,59;CL:0000559,3.41e-24,59;CL:0002009,4.25e-23,61;CL:0000763,1.66e-21,108;CL:0000049,1.66e-21,108;CL:0000738,1.80e-15,136;CL:0000134,1.44e-13,354;CL:0000048,5.80e-13,427;CL:0002320,6.39e-13,361;CL:0000723,1.76e-12,433;CL:0000034,1.86e-12,441;CL:0000094,3.07e-12,8;CL:0002031,1.15e-11,120;CL:0002032,3.05e-11,161;CL:0000837,3.05e-11,161;CL:0000081,9.19e-11,11;CL:0000219,1.14e-10,386;CL:0000037,2.64e-10,168;CL:0000988,7.78e-10,177;CL:0002087,6.45e-09,115;CL:0000775,1.14e-07,3;CL:0000097,2.41e-07,5;CL:0002028,2.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-25;42!CL:0000049;2.67e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.52e-11!216;UBERON:0002371!2.03e-10!80;UBERON:0001474!1.94e-09!86;UBERON:0002390!5.32e-09!102;UBERON:0003061!5.32e-09!102;UBERON:0004765!8.98e-09!101;UBERON:0001434!8.98e-09!101;UBERON:0002204!4.64e-08!167;UBERON:0002193!7.51e-08!112;UBERON:0002384!1.02e-07!375;UBERON:0000926!5.03e-07!448;UBERON:0004120!5.03e-07!448;UBERON:0006603!5.03e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-24,76;UBERON:0001474,4.28e-23,82;UBERON:0004765,4.54e-20,90;UBERON:0002405,2.63e-19,93;UBERON:0002390,1.10e-18,98;UBERON:0003061,1.10e-18,98;UBERON:0001434,3.64e-18,100;UBERON:0002193,3.93e-17,108;UBERON:0003081,1.90e-15,203;UBERON:0002204,5.89e-13,167;UBERON:0002384,1.30e-12,371;UBERON:0000926,2.61e-10,315;UBERON:0004120,2.61e-10,315;UBERON:0006603,2.61e-10,315 | |||
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| |||
|short_description=p@chr19:54377553..54377565,+ | |||
}} |
Revision as of 22:15, 11 September 2013
Short description: | p@chr19:54377553..54377565, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:54377553..54377565, + |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.33e-24 | 76 |
bone element | 4.28e-23 | 82 |
skeletal element | 4.54e-20 | 90 |
immune system | 2.63e-19 | 93 |
hematopoietic system | 1.10e-18 | 98 |
blood island | 1.10e-18 | 98 |
skeletal system | 3.64e-18 | 100 |
hemolymphoid system | 3.93e-17 | 108 |
lateral plate mesoderm | 1.90e-15 | 203 |
musculoskeletal system | 5.89e-13 | 167 |
connective tissue | 1.30e-12 | 371 |
mesoderm | 2.61e-10 | 315 |
mesoderm-derived structure | 2.61e-10 | 315 |
presumptive mesoderm | 2.61e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.