FFCP PHASE1:Hg19::chr1:153388993..153389000,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=338324|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21657|TSSclassifier=N|UniProt=Q86SG5|association_with_transcript=0bp_to_NM_176823,uc001fbt.1_5end|coexpression_cluster_id=C197|description=CAGE_peak_1_at_S100A7A_5end|id=chr1:153388993..153389000,+|ontology_enrichment_celltype=CL:0000453!1.35e-24!5;CL:0000622!4.81e-16!5;CL:0000990!1.45e-13!8;CL:0000154!2.16e-13!6;CL:0001014!2.86e-11!2;CL:0001016!2.86e-11!2;CL:0000317!3.50e-11!2;CL:1000448!3.50e-11!2;CL:0002308!3.50e-11!2;CL:0002140!3.50e-11!2;CL:0000451!4.75e-11!10;CL:0002251!1.93e-10!21;CL:0002076!1.99e-09!43;CL:0000150!5.92e-09!9;CL:0002621!8.80e-08!3;CL:0002623!2.49e-07!3|ontology_enrichment_celltype_v019=CL:0001014;3.53e-22;2!CL:0001016;3.53e-22;2!CL:0000317;4.86e-22;2!CL:1000448;4.86e-22;2!CL:0002308;4.86e-22;2!CL:0002140;4.86e-22;2!CL:0000453;8.68e-20;5!CL:0000622;2.18e-19;5!CL:0000154;2.89e-16;6!CL:0002621;3.59e-15;3!CL:0000990;2.94e-11;8!CL:0000150;4.85e-11;9!CL:0000451;2.62e-09;10!CL:0002251;1.36e-08;20!CL:0000840;5.17e-08;5!CL:0002159;2.06e-07;14|ontology_enrichment_celltype_v019_2=CL:0001014,3.53e-22,2;CL:0001016,3.53e-22,2;CL:0000317,5.41e-22,2;CL:1000448,5.41e-22,2;CL:0002308,5.41e-22,2;CL:0002140,5.41e-22,2;CL:0000453,8.41e-20,5;CL:0000622,2.18e-19,5;CL:0000154,2.89e-16,6;CL:0002621,3.99e-15,3;CL:0000990,2.89e-11,8;CL:0000150,4.85e-11,9;CL:0000451,2.59e-09,10;CL:0002251,1.43e-08,20;CL:0000840,5.17e-08,5;CL:0001029,5.17e-08,5;CL:0002159,2.11e-07,14|ontology_enrichment_development_v019=UBERON:0009143;6.97e-12;1!UBERON:0008814;8.93e-07;2!UBERON:0010056;8.93e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;1.32e-11;1!DOID:3149;1.32e-11;1|ontology_enrichment_disease_v019_2=DOID:3151,1.81e-11,1;DOID:3149,1.81e-11,1|ontology_enrichment_uberon=UBERON:0000166!6.07e-14!21;UBERON:0000165!1.18e-12!28;UBERON:0000930!1.18e-12!28;UBERON:0002419!3.50e-11!2;UBERON:0007771!3.50e-11!2;UBERON:0003297!3.50e-11!2;UBERON:0001821!3.50e-11!2;UBERON:0003487!3.50e-11!2;UBERON:0001820!3.50e-11!2;UBERON:0005089!3.50e-11!2;UBERON:0005088!3.50e-11!2;UBERON:0001004!3.53e-10!72;UBERON:0000161!7.75e-10!35;UBERON:0001949!8.80e-08!3;UBERON:0001044!9.24e-08!6;UBERON:0003293!9.24e-08!6;UBERON:0003294!9.24e-08!6;UBERON:0010047!9.24e-08!6;UBERON:0000167!9.24e-08!6;UBERON:0003408!9.96e-08!10;UBERON:0004119!1.01e-07!169;UBERON:0000925!1.01e-07!169;UBERON:0006595!1.01e-07!169;UBERON:0006562!2.47e-07!11;UBERON:0001444!9.78e-07!48|ontology_enrichment_uberon_v019=UBERON:0002419;4.86e-22;2!UBERON:0007771;4.86e-22;2!UBERON:0003297;4.86e-22;2!UBERON:0001821;4.86e-22;2!UBERON:0003487;4.86e-22;2!UBERON:0001820;4.86e-22;2!UBERON:0006562;1.02e-21;2!UBERON:0001949;3.59e-15;3!UBERON:0002372;6.97e-12;1!UBERON:0001961;6.97e-12;1!UBERON:0001744;6.97e-12;1!UBERON:0001042;6.97e-12;1!UBERON:0001735;6.97e-12;1!UBERON:0000165;2.25e-09;28!UBERON:0000161;4.31e-09;19!UBERON:0000166;4.31e-09;19!UBERON:0000486;1.84e-08;12!UBERON:0003929;5.26e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.41e-22,2;UBERON:0007771,5.41e-22,2;UBERON:0003297,5.41e-22,2;UBERON:0001821,5.41e-22,2;UBERON:0003487,5.41e-22,2;UBERON:0001820,5.41e-22,2;UBERON:0005089,5.41e-22,2;UBERON:0005088,5.41e-22,2;UBERON:0001949,3.99e-15,3;UBERON:0000166,5.76e-12,22;UBERON:0002372,6.26e-12,1;UBERON:0001961,6.26e-12,1;UBERON:0001744,6.26e-12,1;UBERON:0001735,6.26e-12,1;UBERON:0006562,3.24e-09,11;UBERON:0000165,4.75e-09,29;UBERON:0000930,4.75e-09,29;UBERON:0003102,1.85e-07,99;UBERON:0000161,2.92e-07,36|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,5.18217629122586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3495820986942,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.76251414593493,1.30012049207304,0,0,0,0,0,0,0,0,0,0.661139661443912,0,2.93509238737543,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,1.30815439456455,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979923974143776,0,0,0,0,0,0,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=338324 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21657 | |||
|TSSclassifier=N | |||
|UniProt=Q86SG5 | |||
|association_with_transcript=0bp_to_NM_176823,uc001fbt.1_5end | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_S100A7A_5end | |||
|id=chr1:153388993..153389000,+ | |||
|ontology_enrichment_celltype=CL:0000453!1.35e-24!5;CL:0000622!4.81e-16!5;CL:0000990!1.45e-13!8;CL:0000154!2.16e-13!6;CL:0001014!2.86e-11!2;CL:0001016!2.86e-11!2;CL:0000317!3.50e-11!2;CL:1000448!3.50e-11!2;CL:0002308!3.50e-11!2;CL:0002140!3.50e-11!2;CL:0000451!4.75e-11!10;CL:0002251!1.93e-10!21;CL:0002076!1.99e-09!43;CL:0000150!5.92e-09!9;CL:0002621!8.80e-08!3;CL:0002623!2.49e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.53e-22;2!CL:0001016;3.53e-22;2!CL:0000317;4.86e-22;2!CL:1000448;4.86e-22;2!CL:0002308;4.86e-22;2!CL:0002140;4.86e-22;2!CL:0000453;8.68e-20;5!CL:0000622;2.18e-19;5!CL:0000154;2.89e-16;6!CL:0002621;3.59e-15;3!CL:0000990;2.94e-11;8!CL:0000150;4.85e-11;9!CL:0000451;2.62e-09;10!CL:0002251;1.36e-08;20!CL:0000840;5.17e-08;5!CL:0002159;2.06e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.53e-22,2;CL:0001016,3.53e-22,2;CL:0000317,5.41e-22,2;CL:1000448,5.41e-22,2;CL:0002308,5.41e-22,2;CL:0002140,5.41e-22,2;CL:0000453,8.41e-20,5;CL:0000622,2.18e-19,5;CL:0000154,2.89e-16,6;CL:0002621,3.99e-15,3;CL:0000990,2.89e-11,8;CL:0000150,4.85e-11,9;CL:0000451,2.59e-09,10;CL:0002251,1.43e-08,20;CL:0000840,5.17e-08,5;CL:0001029,5.17e-08,5;CL:0002159,2.11e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.97e-12;1!UBERON:0008814;8.93e-07;2!UBERON:0010056;8.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.32e-11;1!DOID:3149;1.32e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.81e-11,1;DOID:3149,1.81e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!6.07e-14!21;UBERON:0000165!1.18e-12!28;UBERON:0000930!1.18e-12!28;UBERON:0002419!3.50e-11!2;UBERON:0007771!3.50e-11!2;UBERON:0003297!3.50e-11!2;UBERON:0001821!3.50e-11!2;UBERON:0003487!3.50e-11!2;UBERON:0001820!3.50e-11!2;UBERON:0005089!3.50e-11!2;UBERON:0005088!3.50e-11!2;UBERON:0001004!3.53e-10!72;UBERON:0000161!7.75e-10!35;UBERON:0001949!8.80e-08!3;UBERON:0001044!9.24e-08!6;UBERON:0003293!9.24e-08!6;UBERON:0003294!9.24e-08!6;UBERON:0010047!9.24e-08!6;UBERON:0000167!9.24e-08!6;UBERON:0003408!9.96e-08!10;UBERON:0004119!1.01e-07!169;UBERON:0000925!1.01e-07!169;UBERON:0006595!1.01e-07!169;UBERON:0006562!2.47e-07!11;UBERON:0001444!9.78e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.86e-22;2!UBERON:0007771;4.86e-22;2!UBERON:0003297;4.86e-22;2!UBERON:0001821;4.86e-22;2!UBERON:0003487;4.86e-22;2!UBERON:0001820;4.86e-22;2!UBERON:0006562;1.02e-21;2!UBERON:0001949;3.59e-15;3!UBERON:0002372;6.97e-12;1!UBERON:0001961;6.97e-12;1!UBERON:0001744;6.97e-12;1!UBERON:0001042;6.97e-12;1!UBERON:0001735;6.97e-12;1!UBERON:0000165;2.25e-09;28!UBERON:0000161;4.31e-09;19!UBERON:0000166;4.31e-09;19!UBERON:0000486;1.84e-08;12!UBERON:0003929;5.26e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.41e-22,2;UBERON:0007771,5.41e-22,2;UBERON:0003297,5.41e-22,2;UBERON:0001821,5.41e-22,2;UBERON:0003487,5.41e-22,2;UBERON:0001820,5.41e-22,2;UBERON:0005089,5.41e-22,2;UBERON:0005088,5.41e-22,2;UBERON:0001949,3.99e-15,3;UBERON:0000166,5.76e-12,22;UBERON:0002372,6.26e-12,1;UBERON:0001961,6.26e-12,1;UBERON:0001744,6.26e-12,1;UBERON:0001735,6.26e-12,1;UBERON:0006562,3.24e-09,11;UBERON:0000165,4.75e-09,29;UBERON:0000930,4.75e-09,29;UBERON:0003102,1.85e-07,99;UBERON:0000161,2.92e-07,36 | |||
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|short_description=p1@S100A7A | |||
}} |
Revision as of 00:30, 12 September 2013
Short description: | p1@S100A7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_S100A7A_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 0bp_to_NM_176823, uc001fbt.1_5end |
EntrezGene: | S100A7A |
HGNC: | 21657 |
UniProt: | Q86SG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.53e-22 | 2 |
immature CD1a-positive Langerhans cell | 3.53e-22 | 2 |
sebum secreting cell | 5.41e-22 | 2 |
epithelial cell of sweat gland | 5.41e-22 | 2 |
epithelial cell of skin gland | 5.41e-22 | 2 |
acinar cell of sebaceous gland | 5.41e-22 | 2 |
Langerhans cell | 8.41e-20 | 5 |
acinar cell | 2.18e-19 | 5 |
protein secreting cell | 2.89e-16 | 6 |
gingival epithelial cell | 3.99e-15 | 3 |
conventional dendritic cell | 2.89e-11 | 8 |
glandular epithelial cell | 4.85e-11 | 9 |
dendritic cell | 2.59e-09 | 10 |
epithelial cell of alimentary canal | 1.43e-08 | 20 |
immature conventional dendritic cell | 5.17e-08 | 5 |
common dendritic progenitor | 5.17e-08 | 5 |
general ecto-epithelial cell | 2.11e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.41e-22 | 2 |
epidermis gland | 5.41e-22 | 2 |
gland of integumental system | 5.41e-22 | 2 |
sebaceous gland | 5.41e-22 | 2 |
skin sebaceous gland | 5.41e-22 | 2 |
sweat gland | 5.41e-22 | 2 |
sweat gland placode | 5.41e-22 | 2 |
sebaceous gland placode | 5.41e-22 | 2 |
gingival epithelium | 3.99e-15 | 3 |
oral opening | 5.76e-12 | 22 |
tonsil | 6.26e-12 | 1 |
mucosa-associated lymphoid tissue | 6.26e-12 | 1 |
lymphoid tissue | 6.26e-12 | 1 |
tonsillar ring | 6.26e-12 | 1 |
pharynx | 3.24e-09 | 11 |
mouth | 4.75e-09 | 29 |
stomodeum | 4.75e-09 | 29 |
surface structure | 1.85e-07 | 99 |
orifice | 2.92e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.81e-11 | 1 |
keratoacanthoma | 1.81e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.