FFCP PHASE1:Hg19::chr1:161015838..161015845,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2437|description=CAGE_peak_at_chr1:161015838..161015845,+|id=chr1:161015838..161015845,+|ontology_enrichment_celltype=CL:0000738!2.04e-23!140;CL:0002057!1.94e-22!42;CL:0000860!1.24e-20!45;CL:0000037!1.33e-20!172;CL:0000566!1.33e-20!172;CL:0002031!2.73e-20!124;CL:0002087!2.95e-19!119;CL:0002032!6.75e-19!165;CL:0000837!6.75e-19!165;CL:0000988!7.90e-19!182;CL:0000766!4.76e-16!76;CL:0000839!1.51e-14!70;CL:0002194!2.41e-13!63;CL:0000576!2.41e-13!63;CL:0000040!2.41e-13!63;CL:0000559!2.41e-13!63;CL:0000557!2.89e-13!71;CL:0002009!3.77e-13!65;CL:0000763!7.80e-13!112;CL:0000049!7.80e-13!112;CL:0002393!3.58e-07!9;CL:0002397!3.58e-07!9|ontology_enrichment_celltype_v019=CL:0000860;4.07e-32;33!CL:0002057;4.07e-32;33!CL:0000576;2.05e-28;48!CL:0000473;2.00e-22;39!CL:0000234;2.00e-22;39!CL:0000766;7.79e-22;69!CL:0002393;1.26e-12;6!CL:0002397;1.26e-12;6!CL:0002087;2.92e-12;104!CL:0000738;1.18e-10;136!CL:0000094;1.61e-09;8!CL:0000236;7.24e-09;13!CL:0000767;6.21e-08;3!CL:0000763;8.37e-08;100!CL:0000784;9.00e-07;3!CL:0000623;9.00e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,2.13e-51,42;CL:0002057,2.13e-51,42;CL:0000738,1.08e-44,136;CL:0000473,1.50e-43,48;CL:0000234,1.50e-43,48;CL:0000766,3.62e-43,72;CL:0002009,3.60e-37,61;CL:0002194,1.04e-36,59;CL:0000576,1.04e-36,59;CL:0000040,1.04e-36,59;CL:0000559,1.04e-36,59;CL:0002087,1.81e-36,115;CL:0002031,5.99e-36,120;CL:0000557,6.52e-35,67;CL:0000037,3.31e-34,168;CL:0000839,1.04e-33,66;CL:0000988,1.53e-31,177;CL:0002032,8.37e-31,161;CL:0000837,8.37e-31,161;CL:0000763,9.52e-26,108;CL:0000049,9.52e-26,108;CL:0002393,5.97e-18,9;CL:0002397,5.97e-18,9;CL:0000094,1.18e-09,8;CL:0000134,2.48e-09,354;CL:0002320,7.82e-09,361;CL:0000236,3.08e-08,14;CL:0000767,6.44e-08,3;CL:0000219,1.49e-07,386;CL:0000784,7.77e-07,3;CL:0000623,8.08e-07,3;CL:0000825,8.08e-07,3;CL:0000875,9.29e-07,3;CL:0002396,9.29e-07,3;CL:0000081,9.36e-07,11|ontology_enrichment_development_v019=CL:0002057;2.12e-34;42!CL:0000049;4.13e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.06e-12!102;UBERON:0003061!2.06e-12!102;UBERON:0002371!1.06e-11!80;UBERON:0001474!1.01e-10!86;UBERON:0002193!1.62e-10!112;UBERON:0004765!1.60e-08!101;UBERON:0001434!1.60e-08!101;UBERON:0002405!5.16e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-31,76;UBERON:0001474,3.17e-28,82;UBERON:0002390,2.20e-27,98;UBERON:0003061,2.20e-27,98;UBERON:0002405,4.59e-25,93;UBERON:0004765,1.11e-24,90;UBERON:0002193,1.12e-23,108;UBERON:0001434,2.45e-22,100;UBERON:0002204,2.24e-10,167;UBERON:0003081,3.07e-10,203;UBERON:0002384,3.68e-08,371|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.737201809504527,2.09340350391728,0,0,0.37129905888014,0,0,0,0,0,0.984968464614303,0,0,0.286235987131057,0,0.376627918784408,0.0764134057479513,0.0821005894499457,0.472264687882075,5.50709987588466,4.22212337906934,5.26374819274658,0,0,0,0.542270404062111,0.284338464974843,2.64240395401362,2.76997704265939,1.40381113229099,3.90619567288533,0,0.32389366601898,0,0.290796477559129,0.755751887377619,1.4555043671269,0.929716147622738,0.822335776043652,4.33588919253145,2.8769239232215,1.0246428261164,1.18241114944293,3.44745680736619,3.22742341791913,4.06279459783025,1.50593871634084,0.818718450173537,3.14612878223118,2.75475503133812,2.24650318953266,5.75403413219137,0.329851300186716,1.19678194572979,2.55734850319616,1.45104619314292,2.26954089876456,1.24564449799115,1.7587406567972,1.5644487552606,3.47502151528187,0,1.47311054395026,3.16462387440884,3.16882929467913,2.76385589954557,2.30624510059213,1.57260083605093,1.50176892841506,2.25015821375912,1.99508920618874,1.79025009479181,2.19196984517561,5.27988733383968,2.18455444504853,2.66852776159066,2.13365111283254,2.40237592221607,1.72425731986345,1.32208974556972,0.954053754535364,1.70763890732835,0.587237189370939,0.764546456250458,6.60856642895129,3.36305137788922,0.790152254325231,0.590129310341499,0,0.411202997999018,0.167186495390678,1.95553359980154,1.4203434172042,0,0.111410456885174,0.883817722424512,0.664601683750863,0.812411591295047,0,0.260118695119756,0,0.276350017785848,0.289803085735052,0.741432815810302,0.535081656179426,2.09071047609954,0,2.29932296161153,1.03088233644789,0.759059076058509,0.95569624297229,0,0,0.903450714466637,0.76791966692651,0,0.947109008176067,0.821127996921047,1.81446068902259,1.06976078313403,1.15859523106239,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.785874452986276,0.364295288292542,0,0.324547393654683,0.174129737299267,0,1.66943437013739,2.28797964312051,2.22874500797739,0.39752481473341,0,0,0,0,0,0.626984899610432,0,0.35576626268671,0,0.402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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2437 | |||
|description=CAGE_peak_at_chr1:161015838..161015845,+ | |||
|id=chr1:161015838..161015845,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.04e-23!140;CL:0002057!1.94e-22!42;CL:0000860!1.24e-20!45;CL:0000037!1.33e-20!172;CL:0000566!1.33e-20!172;CL:0002031!2.73e-20!124;CL:0002087!2.95e-19!119;CL:0002032!6.75e-19!165;CL:0000837!6.75e-19!165;CL:0000988!7.90e-19!182;CL:0000766!4.76e-16!76;CL:0000839!1.51e-14!70;CL:0002194!2.41e-13!63;CL:0000576!2.41e-13!63;CL:0000040!2.41e-13!63;CL:0000559!2.41e-13!63;CL:0000557!2.89e-13!71;CL:0002009!3.77e-13!65;CL:0000763!7.80e-13!112;CL:0000049!7.80e-13!112;CL:0002393!3.58e-07!9;CL:0002397!3.58e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.07e-32;33!CL:0002057;4.07e-32;33!CL:0000576;2.05e-28;48!CL:0000473;2.00e-22;39!CL:0000234;2.00e-22;39!CL:0000766;7.79e-22;69!CL:0002393;1.26e-12;6!CL:0002397;1.26e-12;6!CL:0002087;2.92e-12;104!CL:0000738;1.18e-10;136!CL:0000094;1.61e-09;8!CL:0000236;7.24e-09;13!CL:0000767;6.21e-08;3!CL:0000763;8.37e-08;100!CL:0000784;9.00e-07;3!CL:0000623;9.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.13e-51,42;CL:0002057,2.13e-51,42;CL:0000738,1.08e-44,136;CL:0000473,1.50e-43,48;CL:0000234,1.50e-43,48;CL:0000766,3.62e-43,72;CL:0002009,3.60e-37,61;CL:0002194,1.04e-36,59;CL:0000576,1.04e-36,59;CL:0000040,1.04e-36,59;CL:0000559,1.04e-36,59;CL:0002087,1.81e-36,115;CL:0002031,5.99e-36,120;CL:0000557,6.52e-35,67;CL:0000037,3.31e-34,168;CL:0000839,1.04e-33,66;CL:0000988,1.53e-31,177;CL:0002032,8.37e-31,161;CL:0000837,8.37e-31,161;CL:0000763,9.52e-26,108;CL:0000049,9.52e-26,108;CL:0002393,5.97e-18,9;CL:0002397,5.97e-18,9;CL:0000094,1.18e-09,8;CL:0000134,2.48e-09,354;CL:0002320,7.82e-09,361;CL:0000236,3.08e-08,14;CL:0000767,6.44e-08,3;CL:0000219,1.49e-07,386;CL:0000784,7.77e-07,3;CL:0000623,8.08e-07,3;CL:0000825,8.08e-07,3;CL:0000875,9.29e-07,3;CL:0002396,9.29e-07,3;CL:0000081,9.36e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-34;42!CL:0000049;4.13e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-12!102;UBERON:0003061!2.06e-12!102;UBERON:0002371!1.06e-11!80;UBERON:0001474!1.01e-10!86;UBERON:0002193!1.62e-10!112;UBERON:0004765!1.60e-08!101;UBERON:0001434!1.60e-08!101;UBERON:0002405!5.16e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-31,76;UBERON:0001474,3.17e-28,82;UBERON:0002390,2.20e-27,98;UBERON:0003061,2.20e-27,98;UBERON:0002405,4.59e-25,93;UBERON:0004765,1.11e-24,90;UBERON:0002193,1.12e-23,108;UBERON:0001434,2.45e-22,100;UBERON:0002204,2.24e-10,167;UBERON:0003081,3.07e-10,203;UBERON:0002384,3.68e-08,371 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.737201809504527,2.09340350391728,0,0,0.37129905888014,0,0,0,0,0,0.984968464614303,0,0,0.286235987131057,0,0.376627918784408,0.0764134057479513,0.0821005894499457,0.472264687882075,5.50709987588466,4.22212337906934,5.26374819274658,0,0,0,0.542270404062111,0.284338464974843,2.64240395401362,2.76997704265939,1.40381113229099,3.90619567288533,0,0.32389366601898,0,0.290796477559129,0.755751887377619,1.4555043671269,0.929716147622738,0.822335776043652,4.33588919253145,2.8769239232215,1.0246428261164,1.18241114944293,3.44745680736619,3.22742341791913,4.06279459783025,1.50593871634084,0.818718450173537,3.14612878223118,2.75475503133812,2.24650318953266,5.75403413219137,0.329851300186716,1.19678194572979,2.55734850319616,1.45104619314292,2.26954089876456,1.24564449799115,1.7587406567972,1.5644487552606,3.47502151528187,0,1.47311054395026,3.16462387440884,3.16882929467913,2.76385589954557,2.30624510059213,1.57260083605093,1.50176892841506,2.25015821375912,1.99508920618874,1.79025009479181,2.19196984517561,5.27988733383968,2.18455444504853,2.66852776159066,2.13365111283254,2.40237592221607,1.72425731986345,1.32208974556972,0.954053754535364,1.70763890732835,0.587237189370939,0.764546456250458,6.60856642895129,3.36305137788922,0.790152254325231,0.590129310341499,0,0.411202997999018,0.167186495390678,1.95553359980154,1.4203434172042,0,0.111410456885174,0.883817722424512,0.664601683750863,0.812411591295047,0,0.260118695119756,0,0.276350017785848,0.289803085735052,0.741432815810302,0.535081656179426,2.09071047609954,0,2.29932296161153,1.03088233644789,0.759059076058509,0.95569624297229,0,0,0.903450714466637,0.76791966692651,0,0.947109008176067,0.821127996921047,1.81446068902259,1.06976078313403,1.15859523106239,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.785874452986276,0.364295288292542,0,0.324547393654683,0.174129737299267,0,1.66943437013739,2.28797964312051,2.22874500797739,0.39752481473341,0,0,0,0,0,0.626984899610432,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0.662045904066094,0,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0,0.163461903113459,0,0,0.70296429550139,0,0,0.448346041655403,0,0.323745888736263,0,0.204154171254893,0.368502951935304,0.206651562351531,0,0,0.910161361938026,0,0.336672227908132,0.375355559615893,0.831192346452549,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0,0.423863802319124,0.300091096084402,0.206105058476878,0,0.18611685633159,0.168776332241266,0.194874010322397,1.00973509697646,0.368199594569197,0.161646056818812,0,0.201504196455281,0.339121184620975,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.591534000199219,0.168584690078102,0.241011029883482,0.220587945464788,0.653638332277218,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0,0.577465791044295,0,0,2.37061319387782,0.858486162094873,0,0.468008530278475,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,1.97065295158377,0.264145302039678,0.207328115540772,0.432359860250884,0.6312121671319,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0.355391948742546,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,2.56139988262505,1.50939302401662,2.05348858047597,0.76228387266739,0,0,0.670065061337395,1.27587750330633,1.49801404789436,0,2.48649308061621,0.49076596687656,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0.391602314925481,0.686286847621712,0.413536052245775,1.07857100409308,0.426910231213777,0.303127571446259,0,0.604780586659361,0.248107807818777,0.306923946576125,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0,0.364182336013434,0,0.451199612907412,0.0770153371044148,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0.103041011647722,0.366277859273374,0.495056999523528,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.460511024178389,0.137836572484531,0.429680979473094,0.145016693914229,0.170453254832202,0.178064071293475,0.330569830721956,0.192190067365106,1.91419068741876,0.30347334256665,0,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0.243713489631284,0,0.136499911407986,0.141405431953713,0,1.10273068709225,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,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| |||
|short_description=p@chr1:161015838..161015845,+ | |||
}} |
Revision as of 01:19, 12 September 2013
Short description: | p@chr1:161015838..161015845, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:161015838..161015845, + |
Coexpression cluster: | C2437_Basophils_CD19_CD14_Eosinophils_CD14CD16_CD34_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.23e-31 | 76 |
bone element | 3.17e-28 | 82 |
hematopoietic system | 2.20e-27 | 98 |
blood island | 2.20e-27 | 98 |
immune system | 4.59e-25 | 93 |
skeletal element | 1.11e-24 | 90 |
hemolymphoid system | 1.12e-23 | 108 |
skeletal system | 2.45e-22 | 100 |
musculoskeletal system | 2.24e-10 | 167 |
lateral plate mesoderm | 3.07e-10 | 203 |
connective tissue | 3.68e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.