FFCP PHASE1:Hg19::chr1:66738486..66738490,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2598|description=CAGE_peak_at_chr1:66738486..66738490,+|id=chr1:66738486..66738490,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002567;1.71e-14;3|ontology_enrichment_celltype_v019_2=CL:0002567,1.40e-14,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.12e-48!57;UBERON:0005068!5.12e-48!57;UBERON:0006241!5.12e-48!57;UBERON:0007135!5.12e-48!57;UBERON:0002020!4.13e-47!34;UBERON:0003528!4.13e-47!34;UBERON:0001893!7.24e-47!34;UBERON:0002791!1.44e-44!33;UBERON:0002616!6.34e-43!59;UBERON:0001869!1.30e-41!32;UBERON:0002780!1.82e-41!41;UBERON:0001890!1.82e-41!41;UBERON:0006240!1.82e-41!41;UBERON:0003080!2.49e-40!42;UBERON:0000955!6.88e-40!69;UBERON:0006238!6.88e-40!69;UBERON:0001017!9.52e-37!82;UBERON:0003075!4.64e-35!86;UBERON:0007284!4.64e-35!86;UBERON:0005743!1.25e-34!86;UBERON:0002346!4.35e-33!90;UBERON:0002619!1.93e-32!22;UBERON:0000073!2.01e-32!94;UBERON:0001016!2.01e-32!94;UBERON:0003056!3.16e-30!61;UBERON:0000956!3.54e-28!25;UBERON:0000203!3.54e-28!25;UBERON:0001950!2.62e-27!20;UBERON:0000033!1.39e-24!123;UBERON:0000153!1.57e-24!129;UBERON:0007811!1.57e-24!129;UBERON:0007023!2.56e-24!115;UBERON:0002308!1.16e-21!9;UBERON:0000125!1.16e-21!9;UBERON:0002420!1.61e-21!9;UBERON:0007245!1.61e-21!9;UBERON:0010009!1.61e-21!9;UBERON:0010011!1.61e-21!9;UBERON:0000454!1.61e-21!9;UBERON:0002298!4.23e-18!8;UBERON:0004121!2.82e-17!169;UBERON:0000924!1.18e-16!173;UBERON:0006601!1.18e-16!173;UBERON:0009663!3.59e-16!7;UBERON:0000349!1.72e-15!5;UBERON:0001871!7.22e-13!7;UBERON:0000200!6.82e-12!6;UBERON:0006331!3.11e-10!3;UBERON:0001896!6.24e-10!3;UBERON:0005290!6.24e-10!3;UBERON:0010096!6.24e-10!3;UBERON:0000988!1.10e-09!3;UBERON:0002771!1.48e-09!3;UBERON:0001872!1.66e-09!5;UBERON:0003076!4.10e-09!15;UBERON:0003057!4.10e-09!15;UBERON:0000025!5.85e-09!194;UBERON:0000064!7.74e-09!219;UBERON:0004733!1.42e-08!12;UBERON:0002028!1.42e-08!12;UBERON:0007277!1.42e-08!12;UBERON:0004111!4.04e-08!241;UBERON:0004732!7.40e-08!13;UBERON:0000369!1.04e-07!4;UBERON:0002435!1.04e-07!4;UBERON:0000204!1.04e-07!4;UBERON:0010082!1.04e-07!4;UBERON:0001875!1.38e-07!2;UBERON:0006514!1.38e-07!2;UBERON:0001954!2.28e-07!2;UBERON:0003022!2.28e-07!2;UBERON:0002421!2.28e-07!2;UBERON:0002600!2.28e-07!2;UBERON:0002148!2.91e-07!2;UBERON:0009662!2.91e-07!2;UBERON:0001876!4.19e-07!2|ontology_enrichment_uberon_v019=UBERON:0001897;5.15e-21;2!UBERON:0001954;5.15e-21;2!UBERON:0001875;5.15e-21;2!UBERON:0003022;5.15e-21;2!UBERON:0002421;5.15e-21;2!UBERON:0006514;5.15e-21;2!UBERON:0010225;5.15e-21;2!UBERON:0002600;5.15e-21;2!UBERON:0002784;3.26e-11;4!UBERON:0000349;3.10e-09;5!UBERON:0002780;4.36e-09;41!UBERON:0001890;4.36e-09;41!UBERON:0001894;5.86e-07;7!UBERON:0009663;5.86e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001954,4.66e-21,2;UBERON:0003022,4.66e-21,2;UBERON:0002421,4.66e-21,2;UBERON:0002600,4.66e-21,2;UBERON:0001875,5.70e-21,2;UBERON:0006514,5.70e-21,2;UBERON:0001897,6.96e-21,2;UBERON:0010225,6.96e-21,2;UBERON:0002784,3.79e-11,4;UBERON:0002780,2.90e-09,41;UBERON:0001890,2.90e-09,41;UBERON:0003080,2.90e-09,41;UBERON:0006240,2.90e-09,41;UBERON:0000349,2.97e-09,5;UBERON:0000073,2.27e-07,53;UBERON:0002616,2.27e-07,53;UBERON:0001049,5.09e-07,56;UBERON:0005068,5.09e-07,56;UBERON:0006241,5.09e-07,56;UBERON:0007135,5.09e-07,56;UBERON:0009663,6.04e-07,7;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2598 | |||
|description=CAGE_peak_at_chr1:66738486..66738490,+ | |||
|id=chr1:66738486..66738490,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.40e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.12e-48!57;UBERON:0005068!5.12e-48!57;UBERON:0006241!5.12e-48!57;UBERON:0007135!5.12e-48!57;UBERON:0002020!4.13e-47!34;UBERON:0003528!4.13e-47!34;UBERON:0001893!7.24e-47!34;UBERON:0002791!1.44e-44!33;UBERON:0002616!6.34e-43!59;UBERON:0001869!1.30e-41!32;UBERON:0002780!1.82e-41!41;UBERON:0001890!1.82e-41!41;UBERON:0006240!1.82e-41!41;UBERON:0003080!2.49e-40!42;UBERON:0000955!6.88e-40!69;UBERON:0006238!6.88e-40!69;UBERON:0001017!9.52e-37!82;UBERON:0003075!4.64e-35!86;UBERON:0007284!4.64e-35!86;UBERON:0005743!1.25e-34!86;UBERON:0002346!4.35e-33!90;UBERON:0002619!1.93e-32!22;UBERON:0000073!2.01e-32!94;UBERON:0001016!2.01e-32!94;UBERON:0003056!3.16e-30!61;UBERON:0000956!3.54e-28!25;UBERON:0000203!3.54e-28!25;UBERON:0001950!2.62e-27!20;UBERON:0000033!1.39e-24!123;UBERON:0000153!1.57e-24!129;UBERON:0007811!1.57e-24!129;UBERON:0007023!2.56e-24!115;UBERON:0002308!1.16e-21!9;UBERON:0000125!1.16e-21!9;UBERON:0002420!1.61e-21!9;UBERON:0007245!1.61e-21!9;UBERON:0010009!1.61e-21!9;UBERON:0010011!1.61e-21!9;UBERON:0000454!1.61e-21!9;UBERON:0002298!4.23e-18!8;UBERON:0004121!2.82e-17!169;UBERON:0000924!1.18e-16!173;UBERON:0006601!1.18e-16!173;UBERON:0009663!3.59e-16!7;UBERON:0000349!1.72e-15!5;UBERON:0001871!7.22e-13!7;UBERON:0000200!6.82e-12!6;UBERON:0006331!3.11e-10!3;UBERON:0001896!6.24e-10!3;UBERON:0005290!6.24e-10!3;UBERON:0010096!6.24e-10!3;UBERON:0000988!1.10e-09!3;UBERON:0002771!1.48e-09!3;UBERON:0001872!1.66e-09!5;UBERON:0003076!4.10e-09!15;UBERON:0003057!4.10e-09!15;UBERON:0000025!5.85e-09!194;UBERON:0000064!7.74e-09!219;UBERON:0004733!1.42e-08!12;UBERON:0002028!1.42e-08!12;UBERON:0007277!1.42e-08!12;UBERON:0004111!4.04e-08!241;UBERON:0004732!7.40e-08!13;UBERON:0000369!1.04e-07!4;UBERON:0002435!1.04e-07!4;UBERON:0000204!1.04e-07!4;UBERON:0010082!1.04e-07!4;UBERON:0001875!1.38e-07!2;UBERON:0006514!1.38e-07!2;UBERON:0001954!2.28e-07!2;UBERON:0003022!2.28e-07!2;UBERON:0002421!2.28e-07!2;UBERON:0002600!2.28e-07!2;UBERON:0002148!2.91e-07!2;UBERON:0009662!2.91e-07!2;UBERON:0001876!4.19e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;5.15e-21;2!UBERON:0001954;5.15e-21;2!UBERON:0001875;5.15e-21;2!UBERON:0003022;5.15e-21;2!UBERON:0002421;5.15e-21;2!UBERON:0006514;5.15e-21;2!UBERON:0010225;5.15e-21;2!UBERON:0002600;5.15e-21;2!UBERON:0002784;3.26e-11;4!UBERON:0000349;3.10e-09;5!UBERON:0002780;4.36e-09;41!UBERON:0001890;4.36e-09;41!UBERON:0001894;5.86e-07;7!UBERON:0009663;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,4.66e-21,2;UBERON:0003022,4.66e-21,2;UBERON:0002421,4.66e-21,2;UBERON:0002600,4.66e-21,2;UBERON:0001875,5.70e-21,2;UBERON:0006514,5.70e-21,2;UBERON:0001897,6.96e-21,2;UBERON:0010225,6.96e-21,2;UBERON:0002784,3.79e-11,4;UBERON:0002780,2.90e-09,41;UBERON:0001890,2.90e-09,41;UBERON:0003080,2.90e-09,41;UBERON:0006240,2.90e-09,41;UBERON:0000349,2.97e-09,5;UBERON:0000073,2.27e-07,53;UBERON:0002616,2.27e-07,53;UBERON:0001049,5.09e-07,56;UBERON:0005068,5.09e-07,56;UBERON:0006241,5.09e-07,56;UBERON:0007135,5.09e-07,56;UBERON:0009663,6.04e-07,7;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
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|short_description=p@chr1:66738486..66738490,+ | |||
}} |
Revision as of 06:31, 12 September 2013
Short description: | p@chr1:66738486..66738490, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:66738486..66738490, + |
Coexpression cluster: | C2598_anaplastic_substantia_thalamus_globus_locus_corpus_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 4.66e-21 | 2 |
lobe parts of cerebral cortex | 4.66e-21 | 2 |
hippocampal formation | 4.66e-21 | 2 |
limbic lobe | 4.66e-21 | 2 |
globus pallidus | 5.70e-21 | 2 |
pallidum | 5.70e-21 | 2 |
dorsal plus ventral thalamus | 6.96e-21 | 2 |
thalamic complex | 6.96e-21 | 2 |
regional part of diencephalon | 3.79e-11 | 4 |
regional part of forebrain | 2.90e-09 | 41 |
forebrain | 2.90e-09 | 41 |
anterior neural tube | 2.90e-09 | 41 |
future forebrain | 2.90e-09 | 41 |
limbic system | 2.97e-09 | 5 |
regional part of nervous system | 2.27e-07 | 53 |
regional part of brain | 2.27e-07 | 53 |
neural tube | 5.09e-07 | 56 |
neural rod | 5.09e-07 | 56 |
future spinal cord | 5.09e-07 | 56 |
neural keel | 5.09e-07 | 56 |
telencephalic nucleus | 6.04e-07 | 7 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.