FFCP PHASE1:Hg19::chr21:42688657..42688671,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54097|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1253|TSSclassifier=S|UniProt=P58499|association_with_transcript=0bp_to_ENST00000357985,NM_058186,NM_206964,uc002yzb.1,uc002yzc.1_5end|coexpression_cluster_id=C1352|description=CAGE_peak_2_at_FAM3B_5end|id=chr21:42688657..42688671,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;3.45e-08;1|ontology_enrichment_celltype_v019_2=CL:0002553,3.34e-08,1|ontology_enrichment_development_v019=UBERON:0006595;4.45e-10;86!UBERON:0008801;1.65e-08;1!UBERON:0006298;1.97e-08;1!UBERON:0005754;2.90e-08;1!UBERON:0000358;6.86e-08;1!UBERON:0009143;6.86e-08;1!UBERON:0006242;6.86e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;1.03e-07;1!DOID:1357;1.03e-07;1|ontology_enrichment_disease_v019_2=DOID:0050619,9.94e-08,1;DOID:1357,9.94e-08,1|ontology_enrichment_uberon=UBERON:0007023!4.00e-20!115;UBERON:0004921!3.30e-17!129;UBERON:0004185!3.30e-17!129;UBERON:0001007!4.59e-16!155;UBERON:0001555!4.59e-16!155;UBERON:0007026!4.59e-16!155;UBERON:0004119!4.87e-16!169;UBERON:0000925!4.87e-16!169;UBERON:0006595!4.87e-16!169;UBERON:0000077!1.68e-14!130;UBERON:0001041!5.90e-11!98;UBERON:0006947!6.89e-10!3;UBERON:0004054!6.89e-10!3;UBERON:0005177!4.60e-09!107;UBERON:0000466!9.26e-09!126;UBERON:0003104!1.51e-08!238;UBERON:0009142!1.51e-08!238;UBERON:0005409!1.16e-07!35;UBERON:0001829!1.27e-07!2;UBERON:0003408!1.47e-07!10;UBERON:0002530!1.55e-07!59;UBERON:0005904!1.69e-07!4;UBERON:0000481!1.98e-07!347;UBERON:0001042!2.77e-07!10;UBERON:0009145!2.77e-07!10;UBERON:0000464!4.25e-07!104;UBERON:0003127!5.78e-07!2;UBERON:0003929!6.34e-07!54|ontology_enrichment_uberon_v019=UBERON:0004921;5.08e-16;33!UBERON:0001829;3.11e-15;2!UBERON:0003127;9.59e-14;2!UBERON:0001041;2.79e-12;14!UBERON:0001044;3.02e-11;6!UBERON:0003293;3.02e-11;6!UBERON:0003294;3.02e-11;6!UBERON:0010047;3.02e-11;6!UBERON:0003408;3.02e-11;6!UBERON:0000167;3.02e-11;6!UBERON:0006947;3.91e-10;3!UBERON:0004054;3.91e-10;3!UBERON:0001723;8.77e-10;3!UBERON:0001033;8.77e-10;3!UBERON:0001555;9.37e-10;54!UBERON:0001831;1.65e-08;1!UBERON:0001567;1.65e-08;1!UBERON:0001736;1.97e-08;1!UBERON:0000165;2.59e-08;28!UBERON:0000998;2.90e-08;1!UBERON:0006868;2.90e-08;1!UBERON:0001000;3.45e-08;1!UBERON:0005352;3.45e-08;1!UBERON:0002372;5.05e-08;1!UBERON:0001961;5.05e-08;1!UBERON:0001744;5.05e-08;1!UBERON:0001042;5.05e-08;1!UBERON:0001735;5.05e-08;1!UBERON:0005904;8.28e-08;4!UBERON:0001764;1.03e-07;1!UBERON:0001825;1.03e-07;1!UBERON:0005409;3.09e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.41e-16,118;UBERON:0001829,3.22e-15,2;UBERON:0001007,2.08e-14,145;UBERON:0001555,2.08e-14,145;UBERON:0007026,2.08e-14,145;UBERON:0003127,9.59e-14,2;UBERON:0004119,1.07e-12,160;UBERON:0000925,1.07e-12,160;UBERON:0006595,1.07e-12,160;UBERON:0007023,5.89e-12,114;UBERON:0001044,3.07e-11,6;UBERON:0003293,3.07e-11,6;UBERON:0003294,3.07e-11,6;UBERON:0010047,3.07e-11,6;UBERON:0000167,3.07e-11,6;UBERON:0000161,6.85e-11,36;UBERON:0000166,9.55e-11,22;UBERON:0001041,1.38e-10,87;UBERON:0006947,4.00e-10,3;UBERON:0004054,4.00e-10,3;UBERON:0001723,8.21e-10,3;UBERON:0001033,8.21e-10,3;UBERON:0010056,8.21e-10,3;UBERON:0001004,5.56e-09,74;UBERON:0001831,1.65e-08,1;UBERON:0001567,1.65e-08,1;UBERON:0008801,1.65e-08,1;UBERON:0001736,2.04e-08,1;UBERON:0006298,2.04e-08,1;UBERON:0000998,2.90e-08,1;UBERON:0006868,2.90e-08,1;UBERON:0001000,3.58e-08,1;UBERON:0005352,3.58e-08,1;UBERON:0002372,4.71e-08,1;UBERON:0001961,4.71e-08,1;UBERON:0001744,4.71e-08,1;UBERON:0001735,4.71e-08,1;UBERON:0000165,5.12e-08,29;UBERON:0000930,5.12e-08,29;UBERON:0011216,6.76e-08,223;UBERON:0005904,8.42e-08,4;UBERON:0001764,9.94e-08,1;UBERON:0001825,9.94e-08,1;UBERON:0003408,6.49e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1253 | |||
|TSSclassifier=S | |||
|UniProt=P58499 | |||
|association_with_transcript=0bp_to_ENST00000357985,NM_058186,NM_206964,uc002yzb.1,uc002yzc.1_5end | |||
|coexpression_cluster_id=C1352 | |||
|description=CAGE_peak_2_at_FAM3B_5end | |||
|id=chr21:42688657..42688671,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.45e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.34e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006595;4.45e-10;86!UBERON:0008801;1.65e-08;1!UBERON:0006298;1.97e-08;1!UBERON:0005754;2.90e-08;1!UBERON:0000358;6.86e-08;1!UBERON:0009143;6.86e-08;1!UBERON:0006242;6.86e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.03e-07;1!DOID:1357;1.03e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.94e-08,1;DOID:1357,9.94e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.00e-20!115;UBERON:0004921!3.30e-17!129;UBERON:0004185!3.30e-17!129;UBERON:0001007!4.59e-16!155;UBERON:0001555!4.59e-16!155;UBERON:0007026!4.59e-16!155;UBERON:0004119!4.87e-16!169;UBERON:0000925!4.87e-16!169;UBERON:0006595!4.87e-16!169;UBERON:0000077!1.68e-14!130;UBERON:0001041!5.90e-11!98;UBERON:0006947!6.89e-10!3;UBERON:0004054!6.89e-10!3;UBERON:0005177!4.60e-09!107;UBERON:0000466!9.26e-09!126;UBERON:0003104!1.51e-08!238;UBERON:0009142!1.51e-08!238;UBERON:0005409!1.16e-07!35;UBERON:0001829!1.27e-07!2;UBERON:0003408!1.47e-07!10;UBERON:0002530!1.55e-07!59;UBERON:0005904!1.69e-07!4;UBERON:0000481!1.98e-07!347;UBERON:0001042!2.77e-07!10;UBERON:0009145!2.77e-07!10;UBERON:0000464!4.25e-07!104;UBERON:0003127!5.78e-07!2;UBERON:0003929!6.34e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.08e-16;33!UBERON:0001829;3.11e-15;2!UBERON:0003127;9.59e-14;2!UBERON:0001041;2.79e-12;14!UBERON:0001044;3.02e-11;6!UBERON:0003293;3.02e-11;6!UBERON:0003294;3.02e-11;6!UBERON:0010047;3.02e-11;6!UBERON:0003408;3.02e-11;6!UBERON:0000167;3.02e-11;6!UBERON:0006947;3.91e-10;3!UBERON:0004054;3.91e-10;3!UBERON:0001723;8.77e-10;3!UBERON:0001033;8.77e-10;3!UBERON:0001555;9.37e-10;54!UBERON:0001831;1.65e-08;1!UBERON:0001567;1.65e-08;1!UBERON:0001736;1.97e-08;1!UBERON:0000165;2.59e-08;28!UBERON:0000998;2.90e-08;1!UBERON:0006868;2.90e-08;1!UBERON:0001000;3.45e-08;1!UBERON:0005352;3.45e-08;1!UBERON:0002372;5.05e-08;1!UBERON:0001961;5.05e-08;1!UBERON:0001744;5.05e-08;1!UBERON:0001042;5.05e-08;1!UBERON:0001735;5.05e-08;1!UBERON:0005904;8.28e-08;4!UBERON:0001764;1.03e-07;1!UBERON:0001825;1.03e-07;1!UBERON:0005409;3.09e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.41e-16,118;UBERON:0001829,3.22e-15,2;UBERON:0001007,2.08e-14,145;UBERON:0001555,2.08e-14,145;UBERON:0007026,2.08e-14,145;UBERON:0003127,9.59e-14,2;UBERON:0004119,1.07e-12,160;UBERON:0000925,1.07e-12,160;UBERON:0006595,1.07e-12,160;UBERON:0007023,5.89e-12,114;UBERON:0001044,3.07e-11,6;UBERON:0003293,3.07e-11,6;UBERON:0003294,3.07e-11,6;UBERON:0010047,3.07e-11,6;UBERON:0000167,3.07e-11,6;UBERON:0000161,6.85e-11,36;UBERON:0000166,9.55e-11,22;UBERON:0001041,1.38e-10,87;UBERON:0006947,4.00e-10,3;UBERON:0004054,4.00e-10,3;UBERON:0001723,8.21e-10,3;UBERON:0001033,8.21e-10,3;UBERON:0010056,8.21e-10,3;UBERON:0001004,5.56e-09,74;UBERON:0001831,1.65e-08,1;UBERON:0001567,1.65e-08,1;UBERON:0008801,1.65e-08,1;UBERON:0001736,2.04e-08,1;UBERON:0006298,2.04e-08,1;UBERON:0000998,2.90e-08,1;UBERON:0006868,2.90e-08,1;UBERON:0001000,3.58e-08,1;UBERON:0005352,3.58e-08,1;UBERON:0002372,4.71e-08,1;UBERON:0001961,4.71e-08,1;UBERON:0001744,4.71e-08,1;UBERON:0001735,4.71e-08,1;UBERON:0000165,5.12e-08,29;UBERON:0000930,5.12e-08,29;UBERON:0011216,6.76e-08,223;UBERON:0005904,8.42e-08,4;UBERON:0001764,9.94e-08,1;UBERON:0001825,9.94e-08,1;UBERON:0003408,6.49e-07,10 | |||
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|short_description=p2@FAM3B | |||
}} |
Revision as of 10:28, 12 September 2013
Short description: | p2@FAM3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_FAM3B_5end |
Coexpression cluster: | C1352_pancreas_salivary_small_submaxillary_parotid_nonsmall_smallcell |
Association with transcript: | 0bp_to_ENST00000357985, NM_058186, NM_206964, uc002yzb.1, uc002yzc.1_5end |
EntrezGene: | FAM3B |
HGNC: | 1253 |
UniProt: | P58499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.34e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.94e-08 | 1 |
maxillary sinus cancer | 9.94e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.