FFCP PHASE1:Hg19::chr2:113590944..113590951,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3553|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5992|TSSclassifier=N|UniProt=|association_with_transcript=200bp_to_ENST00000487639_5end|coexpression_cluster_id=C0|description=CAGE_peak_11_at_IL1B_5end|id=chr2:113590944..113590951,-|ontology_enrichment_celltype=CL:0002057!1.28e-51!42;CL:0000860!1.44e-47!45;CL:0000766!1.90e-46!76;CL:0002194!2.79e-35!63;CL:0000576!2.79e-35!63;CL:0000040!2.79e-35!63;CL:0000559!2.79e-35!63;CL:0002009!6.34e-34!65;CL:0000763!3.11e-31!112;CL:0000049!3.11e-31!112;CL:0000839!7.14e-31!70;CL:0000557!2.59e-30!71;CL:0000738!1.55e-28!140;CL:0000037!2.76e-23!172;CL:0000566!2.76e-23!172;CL:0002087!3.27e-22!119;CL:0000988!2.59e-21!182;CL:0002032!6.21e-21!165;CL:0000837!6.21e-21!165;CL:0000094!1.02e-20!8;CL:0002031!5.60e-17!124;CL:0000359!1.95e-16!32;CL:0000048!1.54e-15!430;CL:0000034!2.84e-15!444;CL:0000723!4.30e-15!436;CL:0000081!1.22e-14!11;CL:0000192!1.45e-11!42;CL:0000514!1.45e-11!42;CL:0000134!3.30e-09!358;CL:0000775!3.88e-09!3;CL:0002371!7.59e-09!591;CL:0002320!8.83e-09!365;CL:0000842!1.57e-08!3;CL:0000767!2.69e-08!3;CL:0000187!3.73e-08!54;CL:0000144!5.49e-08!625;CL:0000219!8.64e-08!390;CL:0000680!1.55e-07!57;CL:0000056!1.55e-07!57;CL:0000355!1.55e-07!57;CL:0000183!3.69e-07!59;CL:0000393!5.57e-07!60;CL:0000211!5.57e-07!60;CL:0000012!6.33e-07!682|ontology_enrichment_celltype_v019=CL:0000860;1.02e-55;33!CL:0002057;1.02e-55;33!CL:0000473;4.58e-37;39!CL:0000234;4.58e-37;39!CL:0000576;3.46e-33;48!CL:0000766;6.24e-26;69!CL:0000094;1.13e-25;8!CL:0000081;1.51e-18;11!CL:0000775;3.70e-18;3!CL:0000763;4.44e-14;100!CL:0002087;7.96e-13;104!CL:0000771;9.60e-13;2!CL:0000738;1.10e-09;136!CL:0002393;1.50e-09;6!CL:0002397;1.50e-09;6!CL:0000226;1.12e-08;3!CL:0000842;1.12e-08;3!CL:0002591;5.67e-07;1|ontology_enrichment_celltype_v019_2=CL:0000860,1.48e-64,42;CL:0002057,1.48e-64,42;CL:0000766,1.13e-58,72;CL:0000473,6.40e-56,48;CL:0000234,6.40e-56,48;CL:0002194,7.98e-44,59;CL:0000576,7.98e-44,59;CL:0000040,7.98e-44,59;CL:0000559,7.98e-44,59;CL:0002009,2.91e-42,61;CL:0000839,9.11e-39,66;CL:0000557,3.95e-38,67;CL:0000763,1.57e-37,108;CL:0000049,1.57e-37,108;CL:0000738,1.39e-33,136;CL:0000037,3.66e-26,168;CL:0000094,9.09e-26,8;CL:0002087,8.23e-25,115;CL:0000988,1.48e-24,177;CL:0002032,1.80e-23,161;CL:0000837,1.80e-23,161;CL:0002031,2.09e-19,120;CL:0000081,1.29e-18,11;CL:0000775,3.19e-18,3;CL:0000771,8.03e-13,2;CL:0000048,3.52e-10,427;CL:0000723,5.91e-10,433;CL:0000034,1.16e-09,441;CL:0000134,1.97e-09,354;CL:0002320,3.89e-09,361;CL:0000226,1.02e-08,3;CL:0000842,1.02e-08,3;CL:0000219,4.31e-08,386;CL:0002591,6.20e-07,1|ontology_enrichment_development_v019=CL:0002057;4.61e-46;42!CL:0000049;8.29e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.53e-26!80;UBERON:0002204!3.22e-24!167;UBERON:0001474!1.72e-23!86;UBERON:0002390!6.60e-23!102;UBERON:0003061!6.60e-23!102;UBERON:0003081!4.22e-22!216;UBERON:0002193!5.19e-20!112;UBERON:0004765!1.05e-18!101;UBERON:0001434!1.05e-18!101;UBERON:0002405!1.33e-16!115;UBERON:0001637!3.41e-13!42;UBERON:0003509!3.41e-13!42;UBERON:0004572!3.41e-13!42;UBERON:0004573!4.79e-10!33;UBERON:0004571!4.79e-10!33;UBERON:0002384!3.35e-08!375;UBERON:0001981!5.21e-08!60;UBERON:0007500!5.21e-08!60;UBERON:0004537!5.21e-08!60;UBERON:0006965!5.21e-08!60;UBERON:0001134!8.27e-07!61;UBERON:0002036!8.27e-07!61;UBERON:0003082!8.27e-07!61|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.90e-33,76;UBERON:0001474,2.09e-30,82;UBERON:0002390,6.41e-30,98;UBERON:0003061,6.41e-30,98;UBERON:0004765,2.50e-27,90;UBERON:0002193,1.01e-26,108;UBERON:0002405,2.62e-26,93;UBERON:0001434,3.64e-24,100;UBERON:0002204,8.82e-19,167;UBERON:0003081,1.95e-17,203;UBERON:0000926,2.78e-09,315;UBERON:0004120,2.78e-09,315;UBERON:0006603,2.78e-09,315;UBERON:0002384,9.87e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.464448369948228,0,0,0,0,0,0,3.32397245119126,5.01361118675354,3.03815219002193,0,0,0,0,0,0.485168122375632,1.85943229524548,0.822335776043652,1.23882548358041,4.89077066947656,3.58624989140741,6.85798466676897,5.86067657252252,3.22742341791913,0,0.564727018627814,1.09162460023138,2.24723484445085,11.0190201253525,3.85114832491312,15.344091019177,0.659702600373432,0,0,21.7656928971438,6.24123747160254,13.0792672289071,0.502497330513487,1.5644487552606,0.65156653411535,9.6863920421339,7.36555271975129,13.2914202725171,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2576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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5992 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=200bp_to_ENST00000487639_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_11_at_IL1B_5end | |||
|id=chr2:113590944..113590951,- | |||
|ontology_enrichment_celltype=CL:0002057!1.28e-51!42;CL:0000860!1.44e-47!45;CL:0000766!1.90e-46!76;CL:0002194!2.79e-35!63;CL:0000576!2.79e-35!63;CL:0000040!2.79e-35!63;CL:0000559!2.79e-35!63;CL:0002009!6.34e-34!65;CL:0000763!3.11e-31!112;CL:0000049!3.11e-31!112;CL:0000839!7.14e-31!70;CL:0000557!2.59e-30!71;CL:0000738!1.55e-28!140;CL:0000037!2.76e-23!172;CL:0000566!2.76e-23!172;CL:0002087!3.27e-22!119;CL:0000988!2.59e-21!182;CL:0002032!6.21e-21!165;CL:0000837!6.21e-21!165;CL:0000094!1.02e-20!8;CL:0002031!5.60e-17!124;CL:0000359!1.95e-16!32;CL:0000048!1.54e-15!430;CL:0000034!2.84e-15!444;CL:0000723!4.30e-15!436;CL:0000081!1.22e-14!11;CL:0000192!1.45e-11!42;CL:0000514!1.45e-11!42;CL:0000134!3.30e-09!358;CL:0000775!3.88e-09!3;CL:0002371!7.59e-09!591;CL:0002320!8.83e-09!365;CL:0000842!1.57e-08!3;CL:0000767!2.69e-08!3;CL:0000187!3.73e-08!54;CL:0000144!5.49e-08!625;CL:0000219!8.64e-08!390;CL:0000680!1.55e-07!57;CL:0000056!1.55e-07!57;CL:0000355!1.55e-07!57;CL:0000183!3.69e-07!59;CL:0000393!5.57e-07!60;CL:0000211!5.57e-07!60;CL:0000012!6.33e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-55;33!CL:0002057;1.02e-55;33!CL:0000473;4.58e-37;39!CL:0000234;4.58e-37;39!CL:0000576;3.46e-33;48!CL:0000766;6.24e-26;69!CL:0000094;1.13e-25;8!CL:0000081;1.51e-18;11!CL:0000775;3.70e-18;3!CL:0000763;4.44e-14;100!CL:0002087;7.96e-13;104!CL:0000771;9.60e-13;2!CL:0000738;1.10e-09;136!CL:0002393;1.50e-09;6!CL:0002397;1.50e-09;6!CL:0000226;1.12e-08;3!CL:0000842;1.12e-08;3!CL:0002591;5.67e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.48e-64,42;CL:0002057,1.48e-64,42;CL:0000766,1.13e-58,72;CL:0000473,6.40e-56,48;CL:0000234,6.40e-56,48;CL:0002194,7.98e-44,59;CL:0000576,7.98e-44,59;CL:0000040,7.98e-44,59;CL:0000559,7.98e-44,59;CL:0002009,2.91e-42,61;CL:0000839,9.11e-39,66;CL:0000557,3.95e-38,67;CL:0000763,1.57e-37,108;CL:0000049,1.57e-37,108;CL:0000738,1.39e-33,136;CL:0000037,3.66e-26,168;CL:0000094,9.09e-26,8;CL:0002087,8.23e-25,115;CL:0000988,1.48e-24,177;CL:0002032,1.80e-23,161;CL:0000837,1.80e-23,161;CL:0002031,2.09e-19,120;CL:0000081,1.29e-18,11;CL:0000775,3.19e-18,3;CL:0000771,8.03e-13,2;CL:0000048,3.52e-10,427;CL:0000723,5.91e-10,433;CL:0000034,1.16e-09,441;CL:0000134,1.97e-09,354;CL:0002320,3.89e-09,361;CL:0000226,1.02e-08,3;CL:0000842,1.02e-08,3;CL:0000219,4.31e-08,386;CL:0002591,6.20e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;4.61e-46;42!CL:0000049;8.29e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.53e-26!80;UBERON:0002204!3.22e-24!167;UBERON:0001474!1.72e-23!86;UBERON:0002390!6.60e-23!102;UBERON:0003061!6.60e-23!102;UBERON:0003081!4.22e-22!216;UBERON:0002193!5.19e-20!112;UBERON:0004765!1.05e-18!101;UBERON:0001434!1.05e-18!101;UBERON:0002405!1.33e-16!115;UBERON:0001637!3.41e-13!42;UBERON:0003509!3.41e-13!42;UBERON:0004572!3.41e-13!42;UBERON:0004573!4.79e-10!33;UBERON:0004571!4.79e-10!33;UBERON:0002384!3.35e-08!375;UBERON:0001981!5.21e-08!60;UBERON:0007500!5.21e-08!60;UBERON:0004537!5.21e-08!60;UBERON:0006965!5.21e-08!60;UBERON:0001134!8.27e-07!61;UBERON:0002036!8.27e-07!61;UBERON:0003082!8.27e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.90e-33,76;UBERON:0001474,2.09e-30,82;UBERON:0002390,6.41e-30,98;UBERON:0003061,6.41e-30,98;UBERON:0004765,2.50e-27,90;UBERON:0002193,1.01e-26,108;UBERON:0002405,2.62e-26,93;UBERON:0001434,3.64e-24,100;UBERON:0002204,8.82e-19,167;UBERON:0003081,1.95e-17,203;UBERON:0000926,2.78e-09,315;UBERON:0004120,2.78e-09,315;UBERON:0006603,2.78e-09,315;UBERON:0002384,9.87e-09,371 | |||
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|short_description=p11@IL1B | |||
}} |
Revision as of 13:03, 12 September 2013
Short description: | p11@IL1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_IL1B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 200bp_to_ENST00000487639_5end |
EntrezGene: | IL1B |
HGNC: | 5992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.90e-33 | 76 |
bone element | 2.09e-30 | 82 |
hematopoietic system | 6.41e-30 | 98 |
blood island | 6.41e-30 | 98 |
skeletal element | 2.50e-27 | 90 |
hemolymphoid system | 1.01e-26 | 108 |
immune system | 2.62e-26 | 93 |
skeletal system | 3.64e-24 | 100 |
musculoskeletal system | 8.82e-19 | 167 |
lateral plate mesoderm | 1.95e-17 | 203 |
mesoderm | 2.78e-09 | 315 |
mesoderm-derived structure | 2.78e-09 | 315 |
presumptive mesoderm | 2.78e-09 | 315 |
connective tissue | 9.87e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.