FFCP PHASE1:Mm9::chr10:89777497..89777501,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=30|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:89777497..89777501,+|id=chr10:89777497..89777501,+|ontology_enrichment_celltype=CL:0000117!8.00e-07!23;CL:0000337!8.00e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.98e-18!63;UBERON:0001049!5.00e-17!52;UBERON:0005068!5.00e-17!52;UBERON:0006241!5.00e-17!52;UBERON:0007135!5.00e-17!52;UBERON:0002346!4.65e-16!71;UBERON:0003075!4.65e-16!71;UBERON:0007284!4.65e-16!71;UBERON:0000955!1.39e-15!50;UBERON:0006238!1.39e-15!50;UBERON:0003056!6.18e-15!49;UBERON:0000073!6.67e-15!75;UBERON:0001016!6.67e-15!75;UBERON:0001017!1.17e-14!73;UBERON:0005743!1.17e-14!73;UBERON:0002616!1.25e-14!49;UBERON:0002020!4.93e-13!34;UBERON:0004121!5.89e-13!102;UBERON:0000924!5.89e-13!102;UBERON:0006601!5.89e-13!102;UBERON:0003080!8.60e-12!40;UBERON:0000153!1.92e-11!94;UBERON:0002780!7.30e-11!39;UBERON:0001890!7.30e-11!39;UBERON:0006240!7.30e-11!39;UBERON:0007811!1.10e-10!86;UBERON:0002791!2.92e-10!29;UBERON:0003528!2.92e-10!29;UBERON:0001893!2.92e-10!29;UBERON:0000956!2.41e-07!21;UBERON:0001869!2.41e-07!21;UBERON:0000203!2.41e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.95e-12,4;UBERON:0002680,2.95e-12,4;UBERON:0001895,2.95e-12,4;UBERON:0010092,2.95e-12,4;UBERON:0006215,2.95e-12,4;UBERON:0002021,2.17e-10,10;UBERON:0000411,2.17e-10,10;UBERON:0001950,2.17e-10,10;UBERON:0000073,6.33e-10,54;UBERON:0002616,1.08e-08,46;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0004733,1.75e-08,6;UBERON:0004732,1.75e-08,6;UBERON:0002028,1.75e-08,6;UBERON:0007277,1.75e-08,6;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0010371,2.35e-07,73;UBERON:0001017,2.59e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001016,4.09e-07,75|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0.220868540951614,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0,0,0.274462930807229,0.52091337055676,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63502717310392,5.02672096352292,0,0,0,0,0.449371918214468,0,0.376963056338593,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0,0,0,0,0,0,0.60281927134286,0.680364991513279,1.40925092313335,0.374806898238915,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.68741272937475,0,0,0.675022500231806,1.35096360967266,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr10:89777497..89777501,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:89777497..89777501,+ | |||
|id=chr10:89777497..89777501,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.00e-07!23;CL:0000337!8.00e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.98e-18!63;UBERON:0001049!5.00e-17!52;UBERON:0005068!5.00e-17!52;UBERON:0006241!5.00e-17!52;UBERON:0007135!5.00e-17!52;UBERON:0002346!4.65e-16!71;UBERON:0003075!4.65e-16!71;UBERON:0007284!4.65e-16!71;UBERON:0000955!1.39e-15!50;UBERON:0006238!1.39e-15!50;UBERON:0003056!6.18e-15!49;UBERON:0000073!6.67e-15!75;UBERON:0001016!6.67e-15!75;UBERON:0001017!1.17e-14!73;UBERON:0005743!1.17e-14!73;UBERON:0002616!1.25e-14!49;UBERON:0002020!4.93e-13!34;UBERON:0004121!5.89e-13!102;UBERON:0000924!5.89e-13!102;UBERON:0006601!5.89e-13!102;UBERON:0003080!8.60e-12!40;UBERON:0000153!1.92e-11!94;UBERON:0002780!7.30e-11!39;UBERON:0001890!7.30e-11!39;UBERON:0006240!7.30e-11!39;UBERON:0007811!1.10e-10!86;UBERON:0002791!2.92e-10!29;UBERON:0003528!2.92e-10!29;UBERON:0001893!2.92e-10!29;UBERON:0000956!2.41e-07!21;UBERON:0001869!2.41e-07!21;UBERON:0000203!2.41e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.95e-12,4;UBERON:0002680,2.95e-12,4;UBERON:0001895,2.95e-12,4;UBERON:0010092,2.95e-12,4;UBERON:0006215,2.95e-12,4;UBERON:0002021,2.17e-10,10;UBERON:0000411,2.17e-10,10;UBERON:0001950,2.17e-10,10;UBERON:0000073,6.33e-10,54;UBERON:0002616,1.08e-08,46;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0004733,1.75e-08,6;UBERON:0004732,1.75e-08,6;UBERON:0002028,1.75e-08,6;UBERON:0007277,1.75e-08,6;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0010371,2.35e-07,73;UBERON:0001017,2.59e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001016,4.09e-07,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0.220868540951614,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0,0,0.274462930807229,0.52091337055676,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63502717310392,5.02672096352292,0,0,0,0,0.449371918214468,0,0.376963056338593,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0,0,0,0,0,0,0.60281927134286,0.680364991513279,1.40925092313335,0.374806898238915,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.68741272937475,0,0,0.675022500231806,1.35096360967266,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr10:89777497..89777501,+ | |||
}} |
Revision as of 17:56, 12 September 2013
Short description: | p@chr10:89777497..89777501, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:89777497..89777501, + |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.95e-12 | 4 |
regional part of metencephalon | 2.95e-12 | 4 |
metencephalon | 2.95e-12 | 4 |
future metencephalon | 2.95e-12 | 4 |
rhombic lip | 2.95e-12 | 4 |
occipital lobe | 2.17e-10 | 10 |
visual cortex | 2.17e-10 | 10 |
neocortex | 2.17e-10 | 10 |
regional part of nervous system | 6.33e-10 | 54 |
regional part of brain | 1.08e-08 | 46 |
brain | 1.66e-08 | 47 |
future brain | 1.66e-08 | 47 |
segmental subdivision of hindbrain | 1.75e-08 | 6 |
segmental subdivision of nervous system | 1.75e-08 | 6 |
hindbrain | 1.75e-08 | 6 |
presumptive hindbrain | 1.75e-08 | 6 |
neurectoderm | 2.08e-08 | 64 |
neural plate | 2.08e-08 | 64 |
presumptive neural plate | 2.08e-08 | 64 |
neural tube | 1.09e-07 | 52 |
neural rod | 1.09e-07 | 52 |
future spinal cord | 1.09e-07 | 52 |
neural keel | 1.09e-07 | 52 |
ecto-epithelium | 2.35e-07 | 73 |
central nervous system | 2.59e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
nervous system | 4.09e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.