FFCP PHASE1:Hg19::chr3:40518599..40518664,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285267|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26910|TSSclassifier=S|UniProt=Q8N2I2,C9JRN5,B4E3N1,E9PCD9,B4E271|association_with_transcript=0bp_to_ENST00000314686,ENST00000429348,ENST00000442066,ENST00000447116,ENST00000456778,ENST00000462961,ENST00000520737,NM_001145082,NM_001145083,NM_001145093,NR_026746,uc003ckj.2,uc010hhz.2,uc011aza.1,uc011azb.1,uc011azc.1,uc011azd.1_5end|description=CAGE_peak_1_at_ZNF619_5end|id=chr3:40518599..40518664,+|ontology_enrichment_celltype=CL:0000542!3.81e-07!53;CL:0000051!3.81e-07!53;CL:0000236!4.95e-07!14;CL:0000838!8.24e-07!52|ontology_enrichment_celltype_v019=CL:0000236;1.17e-07;13|ontology_enrichment_celltype_v019_2=CL:0000542,3.70e-07,53;CL:0000051,3.70e-07,53;CL:0000236,4.95e-07,14;CL:0000838,7.99e-07,52|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!3.19e-07!31|ontology_enrichment_disease_v019=DOID:8692;6.11e-07;31|ontology_enrichment_disease_v019_2=DOID:8692,3.19e-07,31|ontology_enrichment_uberon=UBERON:0007023!7.03e-17!115;UBERON:0001049!9.49e-12!57;UBERON:0005068!9.49e-12!57;UBERON:0006241!9.49e-12!57;UBERON:0007135!9.49e-12!57;UBERON:0000955!1.43e-10!69;UBERON:0006238!1.43e-10!69;UBERON:0002616!4.44e-10!59;UBERON:0001017!2.60e-09!82;UBERON:0005743!3.02e-09!86;UBERON:0002780!5.72e-09!41;UBERON:0001890!5.72e-09!41;UBERON:0006240!5.72e-09!41;UBERON:0003080!1.34e-08!42;UBERON:0000073!2.33e-08!94;UBERON:0001016!2.33e-08!94;UBERON:0003075!2.56e-07!86;UBERON:0007284!2.56e-07!86;UBERON:0001893!5.05e-07!34;UBERON:0002791!5.49e-07!33|ontology_enrichment_uberon_v019=UBERON:0002780;4.75e-07;41!UBERON:0001890;4.75e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.38e-16,114;UBERON:0001049,3.92e-12,56;UBERON:0005068,3.92e-12,56;UBERON:0006241,3.92e-12,56;UBERON:0007135,3.92e-12,56;UBERON:0000073,6.07e-11,53;UBERON:0002616,6.07e-11,53;UBERON:0000955,7.11e-11,68;UBERON:0006238,7.11e-11,68;UBERON:0001017,1.52e-09,81;UBERON:0002780,5.71e-09,41;UBERON:0001890,5.71e-09,41;UBERON:0003080,5.71e-09,41;UBERON:0006240,5.71e-09,41;UBERON:0003075,1.12e-08,82;UBERON:0007284,1.12e-08,82;UBERON:0001016,1.37e-08,89;UBERON:0002346,9.70e-08,86;UBERON:0003056,2.53e-07,61;UBERON:0001893,5.04e-07,34|phase1_expression=1.81678379270557,2.78330681058278,2.67813367782345,4.00293193412522,4.02264984984559,3.48935409640147,5.06599756336621,1.89515962028049,3.13422753839806,3.93174298402414,2.79120467188971,3.05817920982241,3.9565046734268,5.5694858832021,2.65117900582333,4.03395087871065,1.20538905604795,2.92124036154949,2.92759679274304,6.89477925230012,6.9360235023046,6.58254915103984,5.72471974262113,5.47497700291537,6.52821725892975,5.27252499660864,4.35133124084712,4.25038219093868,4.32700704533794,8.06041736004147,3.2511385896376,4.59710612239464,3.91567694411725,7.02532619316897,0.387336002901508,0.568676929949686,8.22081230137572,4.43196326825502,3.60980005446255,3.25516306073778,9.85228086655667,11.6601719766833,11.8484761111726,3.34415949192999,2.64513160582167,5.09426528494414,2.32429036905685,1.6446715520873,2.78735733805593,1.1507695692886,1.7931249457037,1.89185783910868,2.06847408441971,1.29096936716765,0,2.63539275359647,1.63743690034707,1.34834090667051,2.75475503133812,2.56743221660875,2.55734850319616,3.62836430205388,2.59302754908121,1.70489900213078,2.32167390902867,1.13477044938228,0.622822248995575,2.51248665256743,1.0429658368404,1.73751075764093,3.63239701580021,1.10483290796269,2.84816148696796,6.97142444829408,3.82687739937078,6.70907665626803,7.41368965566868,5.70672192797724,8.19700492155109,6.55529310604872,6.56425034756997,7.48923030434999,24.6394742245852,16.3841583378639,22.2377313465889,8.96133467389665,15.6154434944045,12.6445536789986,11.8988077101275,18.1270213361719,16.507176104174,9.98303221930596,13.379562984383,13.2171328579026,16.2547483264645,7.11137028892708,3.73748563216283,4.71612915298998,3.90642848099067,5.3499678525017,9.12582346574053,10.8892995318989,11.6896037044747,4.90206010294764,7.65975359434577,8.86135578334484,8.12411591295047,4.22701355094728,5.85267064019452,5.91976456573234,8.84320056914715,3.47763702882063,6.22803565280654,7.49114318651197,11.4989076185474,3.96582699441482,5.3650869104269,9.96519591899627,8.8556892206826,10.5126586726952,9.11516835398986,12.3558765778289,8.73335690651082,9.85496905889022,14.9916871862815,9.47109008176067,11.4957919568947,7.05623601286563,7.2208852861547,7.24122019413995,4.87613732627923,4.02420515822182,2.55725123687061,5.06014813338393,3.50936537445123,4.49024208778554,4.7717156823066,10.2193322763554,4.91581049253153,3.76939975686359,3.60122621341817,6.02503747289478,3.27865759463288,4.44941331341315,7.7891374477124,9.75126528875897,7.97747763113191,6.43924685624423,5.71994910780128,11.1437250398869,4.17401055470081,0.860234595106124,5.20710752411391,3.95715559346807,2.93649605346934,2.75118041940067,5.43386912995707,5.42675194255591,6.04802646567407,6.02497102976406,3.62546385398232,2.2808163171555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659753167,6.50078173163648,8.71968486411996,15.704636228507,5.39812451755641,6.48833478412572,4.21885776599862,4.50550097986319,4.57658514560601,4.8325194824207,1.98916222116275,6.6937192230839,4.23580644277392,10.1596821460302,0,5.89578903036348,1.33070477595341,5.53808193870836,7.02970288752463,4.34042272652487,6.5318284499724,2.7348740450911,2.19303106742873,4.96211178389294,0.527613733078862,4.21616011210664,8.0355275381743,9.41594422212707,6.06965604236632,6.14687916648504,3.37069006618028,3.57225361422916,3.25827217931095,5.5735181041002,5.39336743215362,3.66400906740301,2.8920164491938,5.41602340668547,5.34193005714407,2.80272163313789,13.6973808076424,2.80705868584208,6.21077194253165,9.72081000802526,5.3724627989127,3.71972561178001,3.82488199065675,3.20684545892101,4.76597177574985,6.828739083758,7.60385627995501,3.8720462293825,2.12997601315018,1.27820107138737,9.31451510420044,7.3314197934096,0,0.955538938977433,2.01339777236026,3.14080747568778,4.14520944939716,5.17943069750316,2.05325613712494,8.11870101936739,2.91426595835484,3.9769708788558,9.35068643258431,2.97300226943921,5.76025018398696,4.28768015307174,5.58562521196692,5.24784275134024,8.96094198066225,3.29222107453066,5.63841140033983,6.59894331884553,8.04864715171276,10.9907168121022,8.8757702792514,2.71883383500507,8.27058478222711,8.7662727644065,4.09758739292209,4.28529452653578,12.3513205100492,1.84555143385087,10.2247094354512,6.42220996766357,11.753845818419,3.62874593044325,6.86714050928238,4.36350690340377,8.99345628876181,2.97596014533401,3.69740502905135,1.73050624849516,5.29898984307331,0,7.22181455765191,2.95767606251747,2.6721740526556,2.75684698604535,3.76061308938563,3.41004141982077,4.28742608249886,9.95003327350535,9.20553663170868,5.75731751132648,8.80838396415839,4.58581259835643,4.46937942930177,7.62496665548171,6.87389309404181,9.70162506999453,4.78976845373315,4.44903291410865,8.0822463617505,4.44677673434593,6.32054677437425,1.87227517805241,4.1623664892309,5.7921684686082,4.40143490322276,4.69281884806909,9.29034975789785,11.7999891711564,5.99181096766961,5.03184483977566,4.48795889224526|short_description=p1@ZNF619}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=285267 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26910 | |||
|TSSclassifier=S | |||
|UniProt=Q8N2I2,C9JRN5,B4E3N1,E9PCD9,B4E271 | |||
|association_with_transcript=0bp_to_ENST00000314686,ENST00000429348,ENST00000442066,ENST00000447116,ENST00000456778,ENST00000462961,ENST00000520737,NM_001145082,NM_001145083,NM_001145093,NR_026746,uc003ckj.2,uc010hhz.2,uc011aza.1,uc011azb.1,uc011azc.1,uc011azd.1_5end | |||
|description=CAGE_peak_1_at_ZNF619_5end | |||
|id=chr3:40518599..40518664,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.81e-07!53;CL:0000051!3.81e-07!53;CL:0000236!4.95e-07!14;CL:0000838!8.24e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.17e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.70e-07,53;CL:0000051,3.70e-07,53;CL:0000236,4.95e-07,14;CL:0000838,7.99e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.19e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.11e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.19e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.03e-17!115;UBERON:0001049!9.49e-12!57;UBERON:0005068!9.49e-12!57;UBERON:0006241!9.49e-12!57;UBERON:0007135!9.49e-12!57;UBERON:0000955!1.43e-10!69;UBERON:0006238!1.43e-10!69;UBERON:0002616!4.44e-10!59;UBERON:0001017!2.60e-09!82;UBERON:0005743!3.02e-09!86;UBERON:0002780!5.72e-09!41;UBERON:0001890!5.72e-09!41;UBERON:0006240!5.72e-09!41;UBERON:0003080!1.34e-08!42;UBERON:0000073!2.33e-08!94;UBERON:0001016!2.33e-08!94;UBERON:0003075!2.56e-07!86;UBERON:0007284!2.56e-07!86;UBERON:0001893!5.05e-07!34;UBERON:0002791!5.49e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.75e-07;41!UBERON:0001890;4.75e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.38e-16,114;UBERON:0001049,3.92e-12,56;UBERON:0005068,3.92e-12,56;UBERON:0006241,3.92e-12,56;UBERON:0007135,3.92e-12,56;UBERON:0000073,6.07e-11,53;UBERON:0002616,6.07e-11,53;UBERON:0000955,7.11e-11,68;UBERON:0006238,7.11e-11,68;UBERON:0001017,1.52e-09,81;UBERON:0002780,5.71e-09,41;UBERON:0001890,5.71e-09,41;UBERON:0003080,5.71e-09,41;UBERON:0006240,5.71e-09,41;UBERON:0003075,1.12e-08,82;UBERON:0007284,1.12e-08,82;UBERON:0001016,1.37e-08,89;UBERON:0002346,9.70e-08,86;UBERON:0003056,2.53e-07,61;UBERON:0001893,5.04e-07,34 | |||
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| |||
|short_description=p1@ZNF619 | |||
}} |
Revision as of 00:05, 13 September 2013
Short description: | p1@ZNF619 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZNF619_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000314686, ENST00000429348, ENST00000442066, ENST00000447116, ENST00000456778, ENST00000462961, ENST00000520737, NM_001145082, NM_001145083, NM_001145093, NR_026746, uc003ckj.2, uc010hhz.2, uc011aza.1, uc011azb.1, uc011azc.1, uc011azd.1_5end |
EntrezGene: | ZNF619 |
HGNC: | 26910 |
UniProt: | Q8N2I2C9JRN5B4E3N1E9PCD9B4E271 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.70e-07 | 53 |
common lymphoid progenitor | 3.70e-07 | 53 |
B cell | 4.95e-07 | 14 |
lymphoid lineage restricted progenitor cell | 7.99e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.38e-16 | 114 |
neural tube | 3.92e-12 | 56 |
neural rod | 3.92e-12 | 56 |
future spinal cord | 3.92e-12 | 56 |
neural keel | 3.92e-12 | 56 |
regional part of nervous system | 6.07e-11 | 53 |
regional part of brain | 6.07e-11 | 53 |
brain | 7.11e-11 | 68 |
future brain | 7.11e-11 | 68 |
central nervous system | 1.52e-09 | 81 |
regional part of forebrain | 5.71e-09 | 41 |
forebrain | 5.71e-09 | 41 |
anterior neural tube | 5.71e-09 | 41 |
future forebrain | 5.71e-09 | 41 |
neural plate | 1.12e-08 | 82 |
presumptive neural plate | 1.12e-08 | 82 |
nervous system | 1.37e-08 | 89 |
neurectoderm | 9.70e-08 | 86 |
pre-chordal neural plate | 2.53e-07 | 61 |
telencephalon | 5.04e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.19e-07 | 31 |
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