FFCP PHASE1:Hg19::chr3:50329702..50329717,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7866|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5457|TSSclassifier=S|UniProt=F8WEI6|association_with_transcript=102bp_to_ENST00000414734_5end|description=CAGE_peak_3_at_IFRD2_5end|id=chr3:50329702..50329717,-|ontology_enrichment_celltype=CL:0000066!5.57e-18!254;CL:0000012!4.00e-13!682;CL:0002321!4.34e-13!248;CL:0000548!1.45e-12!679;CL:0000004!1.45e-12!679;CL:0000255!1.45e-12!679;CL:0000220!1.67e-12!246|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,1.81e-13,253;CL:0002321,8.47e-08,250|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!1.63e-18!239;DOID:162!7.86e-18!235;DOID:2531!8.35e-12!51;DOID:0060083!8.35e-12!51;DOID:1240!1.26e-09!39;DOID:305!3.77e-09!106;DOID:0050686!1.73e-08!137;DOID:8692!2.15e-08!31;DOID:0050687!1.37e-07!143|ontology_enrichment_disease_v019=DOID:8692;4.21e-08;31!DOID:1240;1.43e-07;39|ontology_enrichment_disease_v019_2=DOID:162,1.78e-12,235;DOID:14566,2.42e-12,239;DOID:2531,1.49e-10,51;DOID:0060083,1.49e-10,51;DOID:1240,1.93e-09,39;DOID:8692,1.01e-08,31;DOID:305,9.80e-07,106|ontology_enrichment_uberon=UBERON:0003104!1.15e-08!238;UBERON:0009142!1.15e-08!238;UBERON:0001048!2.98e-08!168;UBERON:0001737!3.15e-07!9;UBERON:0008947!5.92e-07!38;UBERON:0003258!5.92e-07!38|ontology_enrichment_uberon_v019=UBERON:0001737;3.28e-09;9!UBERON:0001557;3.28e-09;9!UBERON:0000072;9.64e-08;37|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.04e-09,9;UBERON:0008947,9.22e-08,38;UBERON:0003258,9.22e-08,38;UBERON:0000072,3.47e-07,47;UBERON:0001048,8.23e-07,160|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,0,0,1.74467704820074,5.06599756336621,1.89515962028049,1.30592814099919,2.21160542851358,11.1648186875588,0.655324116390517,1.58260186937072,0.990130823680373,0.331397375727916,1.34465029290355,0.602694528023977,0,0.975865597581014,1.60057375499824,1.83600622119828,0.940364164434263,0.572471974262113,1.77936752594749,0.502170558379211,0.840547463227464,0.903106483949403,1.10195093839151,0.393364276848904,0,0.154816123316076,2.75826367343678,5.12050061923025,0.739508020333575,1.62681121218633,2.27470771979874,2.93600439334847,0,0.401088894940283,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,1.58030450865046,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0.535081656179426,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0.639312809217652,0.722878304769133,0.50133791063589,1.30361867064741,0,0,1.13441780596881,1.55210578223795,1.31752178539689,1.37528029272598,1.82147644146271,4.07862887062872,0.649094787309367,0.522389211897802,0.398873881556595,0.238490624305342,0,0,1.59009925893364,0.860234595106124,0.347140501607594,2.26123176769604,2.09749718104953,1.37559020970034,2.92592953151535,0.258416759169329,0.35576626268671,0,1.20848795132744,1.52054421143703,1.22031028774085,0.735326160691737,0,1.3394959242612,1.12264686313085,0.900891843866578,1.53316637465883,0.949265659568129,1.46561395144326,0,0,2.18047026071267,0,0.633152558322899,0.397227542439656,0.286836620748814,2.12801029319014,1.12135520028461,1.06748995729705,0.98667019366864,0,1.48181739276657,1.30769522490767,0.908144565869588,0,2.10889288650417,1.24864030732128,2.85235910772225,1.64393548606981,1.76151747965647,2.5899671098901,1.68540968042698,0.408308342509787,0.859840221182376,0.206651562351531,0,0.247266929278557,2.73048408581408,1.43723628363248,0.841680569770331,1.00094815897571,0.554128230968366,0.438977620880838,0.30648779579902,0.300476117813194,0.907457465280168,0.358779271377724,0,0.423863802319124,0.600182192168805,0.309157587715317,0.257640540045629,0.37223371266318,0.675105328965065,0.194874010322397,0,0.368199594569197,0.161646056818812,1.06502877754984,0.403008392910561,1.01736355386293,1.15956511897978,0.818238361772504,1.72082757233402,1.82960559194393,3.44577397635862,1.2781333715647,1.86589899027667,3.28017106138317,3.28479623168247,0,0.643240938192885,1.38134921352481,0.464367928031979,0,5.79703320195235,3.87744787179634,5.3022426574366,4.96322877295773,3.7039505495709,6.16903609688851,4.31460186112526,3.72820783738158,4.61696588335668,2.21446636387394,1.40241773803446,1.2347220339942,0,3.80265104465493,4.91413608338813,1.18157981336281,0.882926198829301,1.22988438543114,1.3725424823882,0.878002283269004,1.1240175325762,0.904760751704678,0.555530670951178,3.58389135841357,2.07986957055916,1.44331342025273,0.463721619900307,0.117408694235822,0.433099343283221,0.925971025153221,0.570762456703795,0.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5457 | |||
|TSSclassifier=S | |||
|UniProt=F8WEI6 | |||
|association_with_transcript=102bp_to_ENST00000414734_5end | |||
|description=CAGE_peak_3_at_IFRD2_5end | |||
|id=chr3:50329702..50329717,- | |||
|ontology_enrichment_celltype=CL:0000066!5.57e-18!254;CL:0000012!4.00e-13!682;CL:0002321!4.34e-13!248;CL:0000548!1.45e-12!679;CL:0000004!1.45e-12!679;CL:0000255!1.45e-12!679;CL:0000220!1.67e-12!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.81e-13,253;CL:0002321,8.47e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.63e-18!239;DOID:162!7.86e-18!235;DOID:2531!8.35e-12!51;DOID:0060083!8.35e-12!51;DOID:1240!1.26e-09!39;DOID:305!3.77e-09!106;DOID:0050686!1.73e-08!137;DOID:8692!2.15e-08!31;DOID:0050687!1.37e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.21e-08;31!DOID:1240;1.43e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.78e-12,235;DOID:14566,2.42e-12,239;DOID:2531,1.49e-10,51;DOID:0060083,1.49e-10,51;DOID:1240,1.93e-09,39;DOID:8692,1.01e-08,31;DOID:305,9.80e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.15e-08!238;UBERON:0009142!1.15e-08!238;UBERON:0001048!2.98e-08!168;UBERON:0001737!3.15e-07!9;UBERON:0008947!5.92e-07!38;UBERON:0003258!5.92e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.28e-09;9!UBERON:0001557;3.28e-09;9!UBERON:0000072;9.64e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.04e-09,9;UBERON:0008947,9.22e-08,38;UBERON:0003258,9.22e-08,38;UBERON:0000072,3.47e-07,47;UBERON:0001048,8.23e-07,160 | |||
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| |||
|short_description=p3@IFRD2 | |||
}} |
Revision as of 00:40, 13 September 2013
Short description: | p3@IFRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_IFRD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_ENST00000414734_5end |
EntrezGene: | IFRD2 |
HGNC: | 5457 |
UniProt: | F8WEI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.81e-13 | 253 |
embryonic cell | 8.47e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.04e-09 | 9 |
respiratory primordium | 9.22e-08 | 38 |
endoderm of foregut | 9.22e-08 | 38 |
segment of respiratory tract | 3.47e-07 | 47 |
primordium | 8.23e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.78e-12 | 235 |
disease of cellular proliferation | 2.42e-12 | 239 |
hematologic cancer | 1.49e-10 | 51 |
immune system cancer | 1.49e-10 | 51 |
leukemia | 1.93e-09 | 39 |
myeloid leukemia | 1.01e-08 | 31 |
carcinoma | 9.80e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.