FFCP PHASE1:Mm9::chr13:80346914..80346917,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=40|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:80346914..80346917,+|id=chr13:80346914..80346917,+|ontology_enrichment_celltype=CL:0000624!5.71e-59!8;CL:0000791!2.19e-52!9;CL:0000789!2.19e-52!9;CL:0002420!2.19e-52!9;CL:0002419!2.19e-52!9;CL:0000790!2.19e-52!9;CL:0000893!2.38e-44!6;CL:0002489!2.38e-44!6;CL:0000898!2.38e-44!6;CL:0000809!2.38e-44!6;CL:0000810!2.38e-44!6;CL:0000895!2.38e-44!6;CL:0000808!2.38e-44!6;CL:0000894!2.38e-44!6;CL:0000806!2.38e-44!6;CL:0000807!2.38e-44!6;CL:0000805!2.38e-44!6;CL:0002425!2.38e-44!6;CL:0002436!2.38e-44!6;CL:0002427!2.38e-44!6;CL:0002428!2.38e-44!6;CL:0002429!2.38e-44!6;CL:0002433!2.38e-44!6;CL:0002431!2.38e-44!6;CL:0002432!2.38e-44!6;CL:0000084!8.38e-43!11;CL:0000827!8.38e-43!11;CL:0002031!2.85e-41!25;CL:0000838!3.31e-39!12;CL:0000542!3.66e-36!13;CL:0000051!3.66e-36!13;CL:0000988!4.30e-32!32;CL:0002032!4.30e-32!32;CL:0000037!4.30e-32!32;CL:0000566!4.30e-32!32;CL:0000837!4.30e-32!32;CL:0000738!1.48e-27!17;CL:0002087!1.48e-27!17;CL:0002320!4.30e-22!46;CL:0000134!4.30e-22!46;CL:0000553!3.49e-19!6;CL:0000556!3.49e-19!6;CL:0000219!1.07e-18!54;CL:0000063!3.89e-15!66;CL:0000050!6.48e-13!9;CL:0000723!1.03e-10!91;CL:0000048!1.03e-10!91;CL:0000414!1.26e-10!11;CL:0000034!5.48e-10!97;CL:0000839!4.92e-09!13;CL:0000815!7.41e-09!1;CL:0000792!7.41e-09!1;CL:0000548!2.95e-08!115;CL:0000004!2.95e-08!115;CL:0000255!2.95e-08!115;CL:0002371!5.10e-08!118;CL:0000144!8.58e-08!121;CL:0000012!8.58e-08!121;CL:0000763!2.18e-07!16|ontology_enrichment_celltype_v019_2=CL:0000624,3.71e-65,8;CL:0000791,5.24e-58,9;CL:0000789,5.24e-58,9;CL:0002420,5.24e-58,9;CL:0002419,5.24e-58,9;CL:0000790,5.24e-58,9;CL:0000084,1.34e-47,11;CL:0000827,1.34e-47,11;CL:0000838,1.08e-43,12;CL:0000542,2.18e-40,13;CL:0000051,2.18e-40,13;CL:0000893,4.72e-39,6;CL:0002489,4.72e-39,6;CL:0000898,4.72e-39,6;CL:0000809,4.72e-39,6;CL:0000810,4.72e-39,6;CL:0000895,4.72e-39,6;CL:0000808,4.72e-39,6;CL:0000894,4.72e-39,6;CL:0000806,4.72e-39,6;CL:0000807,4.72e-39,6;CL:0000805,4.72e-39,6;CL:0002425,4.72e-39,6;CL:0002436,4.72e-39,6;CL:0002427,4.72e-39,6;CL:0002428,4.72e-39,6;CL:0002429,4.72e-39,6;CL:0002433,4.72e-39,6;CL:0002431,4.72e-39,6;CL:0002432,4.72e-39,6;CL:0000738,4.81e-31,17;CL:0002087,4.81e-31,17;CL:0002031,2.66e-21,25;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000815,9.51e-16,1;CL:0000792,9.51e-16,1;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.30e-22!46;UBERON:0002390!2.03e-15!45;UBERON:0003061!2.03e-15!45;UBERON:0002193!2.10e-14!48;UBERON:0002370!1.77e-11!23;UBERON:0000974!1.77e-11!23;UBERON:0004807!1.77e-11!23;UBERON:0005058!1.77e-11!23;UBERON:0003351!1.77e-11!23;UBERON:0009113!1.77e-11!23;UBERON:0003295!1.77e-11!23;UBERON:0009722!1.77e-11!23;UBERON:0005562!1.77e-11!23;UBERON:0007690!1.77e-11!23;UBERON:0006562!5.45e-11!24;UBERON:0003408!5.45e-11!24;UBERON:0001557!5.45e-11!24;UBERON:0001042!5.45e-11!24;UBERON:0008814!5.45e-11!24;UBERON:0009145!5.45e-11!24;UBERON:0000072!9.66e-10!27;UBERON:0002405!1.33e-09!70;UBERON:0004177!4.73e-09!29;UBERON:0000063!1.89e-07!35;UBERON:0003081!1.93e-07!88;UBERON:0002371!2.18e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.56e-12,46;UBERON:0002370,1.11e-10,23;UBERON:0000974,1.11e-10,23;UBERON:0004807,1.11e-10,23;UBERON:0005058,1.11e-10,23;UBERON:0003351,1.11e-10,23;UBERON:0009113,1.11e-10,23;UBERON:0003295,1.11e-10,23;UBERON:0009722,1.11e-10,23;UBERON:0005562,1.11e-10,23;UBERON:0007690,1.11e-10,23;UBERON:0006562,2.93e-10,24;UBERON:0003408,2.93e-10,24;UBERON:0001557,2.93e-10,24;UBERON:0001042,2.93e-10,24;UBERON:0008814,2.93e-10,24;UBERON:0009145,2.93e-10,24;UBERON:0000072,3.53e-09,27;UBERON:0004177,1.40e-08,29;UBERON:0005057,1.40e-08,29;UBERON:0000077,3.44e-07,35;UBERON:0007811,5.29e-07,36|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,2.81577444303333,0.936258105287974,1.71217968225505,0.398860794976682,8.56003649656029,5.15780374272085,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:80346914..80346917,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:80346914..80346917,+ | |||
|id=chr13:80346914..80346917,+ | |||
|ontology_enrichment_celltype=CL:0000624!5.71e-59!8;CL:0000791!2.19e-52!9;CL:0000789!2.19e-52!9;CL:0002420!2.19e-52!9;CL:0002419!2.19e-52!9;CL:0000790!2.19e-52!9;CL:0000893!2.38e-44!6;CL:0002489!2.38e-44!6;CL:0000898!2.38e-44!6;CL:0000809!2.38e-44!6;CL:0000810!2.38e-44!6;CL:0000895!2.38e-44!6;CL:0000808!2.38e-44!6;CL:0000894!2.38e-44!6;CL:0000806!2.38e-44!6;CL:0000807!2.38e-44!6;CL:0000805!2.38e-44!6;CL:0002425!2.38e-44!6;CL:0002436!2.38e-44!6;CL:0002427!2.38e-44!6;CL:0002428!2.38e-44!6;CL:0002429!2.38e-44!6;CL:0002433!2.38e-44!6;CL:0002431!2.38e-44!6;CL:0002432!2.38e-44!6;CL:0000084!8.38e-43!11;CL:0000827!8.38e-43!11;CL:0002031!2.85e-41!25;CL:0000838!3.31e-39!12;CL:0000542!3.66e-36!13;CL:0000051!3.66e-36!13;CL:0000988!4.30e-32!32;CL:0002032!4.30e-32!32;CL:0000037!4.30e-32!32;CL:0000566!4.30e-32!32;CL:0000837!4.30e-32!32;CL:0000738!1.48e-27!17;CL:0002087!1.48e-27!17;CL:0002320!4.30e-22!46;CL:0000134!4.30e-22!46;CL:0000553!3.49e-19!6;CL:0000556!3.49e-19!6;CL:0000219!1.07e-18!54;CL:0000063!3.89e-15!66;CL:0000050!6.48e-13!9;CL:0000723!1.03e-10!91;CL:0000048!1.03e-10!91;CL:0000414!1.26e-10!11;CL:0000034!5.48e-10!97;CL:0000839!4.92e-09!13;CL:0000815!7.41e-09!1;CL:0000792!7.41e-09!1;CL:0000548!2.95e-08!115;CL:0000004!2.95e-08!115;CL:0000255!2.95e-08!115;CL:0002371!5.10e-08!118;CL:0000144!8.58e-08!121;CL:0000012!8.58e-08!121;CL:0000763!2.18e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.71e-65,8;CL:0000791,5.24e-58,9;CL:0000789,5.24e-58,9;CL:0002420,5.24e-58,9;CL:0002419,5.24e-58,9;CL:0000790,5.24e-58,9;CL:0000084,1.34e-47,11;CL:0000827,1.34e-47,11;CL:0000838,1.08e-43,12;CL:0000542,2.18e-40,13;CL:0000051,2.18e-40,13;CL:0000893,4.72e-39,6;CL:0002489,4.72e-39,6;CL:0000898,4.72e-39,6;CL:0000809,4.72e-39,6;CL:0000810,4.72e-39,6;CL:0000895,4.72e-39,6;CL:0000808,4.72e-39,6;CL:0000894,4.72e-39,6;CL:0000806,4.72e-39,6;CL:0000807,4.72e-39,6;CL:0000805,4.72e-39,6;CL:0002425,4.72e-39,6;CL:0002436,4.72e-39,6;CL:0002427,4.72e-39,6;CL:0002428,4.72e-39,6;CL:0002429,4.72e-39,6;CL:0002433,4.72e-39,6;CL:0002431,4.72e-39,6;CL:0002432,4.72e-39,6;CL:0000738,4.81e-31,17;CL:0002087,4.81e-31,17;CL:0002031,2.66e-21,25;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000815,9.51e-16,1;CL:0000792,9.51e-16,1;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.30e-22!46;UBERON:0002390!2.03e-15!45;UBERON:0003061!2.03e-15!45;UBERON:0002193!2.10e-14!48;UBERON:0002370!1.77e-11!23;UBERON:0000974!1.77e-11!23;UBERON:0004807!1.77e-11!23;UBERON:0005058!1.77e-11!23;UBERON:0003351!1.77e-11!23;UBERON:0009113!1.77e-11!23;UBERON:0003295!1.77e-11!23;UBERON:0009722!1.77e-11!23;UBERON:0005562!1.77e-11!23;UBERON:0007690!1.77e-11!23;UBERON:0006562!5.45e-11!24;UBERON:0003408!5.45e-11!24;UBERON:0001557!5.45e-11!24;UBERON:0001042!5.45e-11!24;UBERON:0008814!5.45e-11!24;UBERON:0009145!5.45e-11!24;UBERON:0000072!9.66e-10!27;UBERON:0002405!1.33e-09!70;UBERON:0004177!4.73e-09!29;UBERON:0000063!1.89e-07!35;UBERON:0003081!1.93e-07!88;UBERON:0002371!2.18e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.56e-12,46;UBERON:0002370,1.11e-10,23;UBERON:0000974,1.11e-10,23;UBERON:0004807,1.11e-10,23;UBERON:0005058,1.11e-10,23;UBERON:0003351,1.11e-10,23;UBERON:0009113,1.11e-10,23;UBERON:0003295,1.11e-10,23;UBERON:0009722,1.11e-10,23;UBERON:0005562,1.11e-10,23;UBERON:0007690,1.11e-10,23;UBERON:0006562,2.93e-10,24;UBERON:0003408,2.93e-10,24;UBERON:0001557,2.93e-10,24;UBERON:0001042,2.93e-10,24;UBERON:0008814,2.93e-10,24;UBERON:0009145,2.93e-10,24;UBERON:0000072,3.53e-09,27;UBERON:0004177,1.40e-08,29;UBERON:0005057,1.40e-08,29;UBERON:0000077,3.44e-07,35;UBERON:0007811,5.29e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,2.81577444303333,0.936258105287974,1.71217968225505,0.398860794976682,8.56003649656029,5.15780374272085,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:80346914..80346917,+ | |||
}} |
Revision as of 01:09, 13 September 2013
Short description: | p@chr13:80346914..80346917, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:80346914..80346917, + |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.56e-12 | 46 |
thymus | 1.11e-10 | 23 |
neck | 1.11e-10 | 23 |
respiratory system epithelium | 1.11e-10 | 23 |
hemolymphoid system gland | 1.11e-10 | 23 |
pharyngeal epithelium | 1.11e-10 | 23 |
thymic region | 1.11e-10 | 23 |
pharyngeal gland | 1.11e-10 | 23 |
entire pharyngeal arch endoderm | 1.11e-10 | 23 |
thymus primordium | 1.11e-10 | 23 |
early pharyngeal endoderm | 1.11e-10 | 23 |
pharynx | 2.93e-10 | 24 |
gland of gut | 2.93e-10 | 24 |
upper respiratory tract | 2.93e-10 | 24 |
chordate pharynx | 2.93e-10 | 24 |
pharyngeal arch system | 2.93e-10 | 24 |
pharyngeal region of foregut | 2.93e-10 | 24 |
segment of respiratory tract | 3.53e-09 | 27 |
hemopoietic organ | 1.40e-08 | 29 |
immune organ | 1.40e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 3.44e-07 | 35 |
craniocervical region | 5.29e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.