FFCP PHASE1:Hg19::chr4:10023114..10023128,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56606|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13446|TSSclassifier=S|UniProt=Q9NRM0|association_with_transcript=0bp_to_NM_020041,uc003gmc.2_5end|coexpression_cluster_id=C4354|description=CAGE_peak_1_at_SLC2A9_5end|id=chr4:10023114..10023128,-|ontology_enrichment_celltype=CL:0002194!2.57e-22!63;CL:0000576!2.57e-22!63;CL:0000040!2.57e-22!63;CL:0000559!2.57e-22!63;CL:0002009!1.09e-20!65;CL:0000557!7.49e-19!71;CL:0000839!2.37e-18!70;CL:0000766!1.13e-17!76;CL:0002057!1.96e-17!42;CL:0000860!7.70e-15!45;CL:0000763!3.71e-14!112;CL:0000049!3.71e-14!112;CL:0002076!4.57e-08!43;CL:0000223!7.60e-08!59|ontology_enrichment_celltype_v019=CL:0000473;2.79e-22;39!CL:0000234;2.79e-22;39!CL:0000860;7.65e-21;33!CL:0002057;7.65e-21;33!CL:0000576;3.49e-19;48!CL:0000766;1.47e-12;69!CL:0002076;7.84e-09;42!CL:0000763;2.11e-08;100!CL:0002368;4.99e-08;13!CL:0000235;3.50e-07;6|ontology_enrichment_celltype_v019_2=CL:0002194,4.97e-35,59;CL:0000576,4.97e-35,59;CL:0000040,4.97e-35,59;CL:0000559,4.97e-35,59;CL:0002009,3.48e-33,61;CL:0000557,7.81e-30,67;CL:0000473,3.38e-29,48;CL:0000234,3.38e-29,48;CL:0000839,4.40e-29,66;CL:0000766,7.76e-29,72;CL:0000860,1.06e-23,42;CL:0002057,1.06e-23,42;CL:0000763,3.40e-23,108;CL:0000049,3.40e-23,108;CL:0000223,5.96e-12,58;CL:0002087,9.04e-12,115;CL:0002076,6.74e-11,42;CL:0000037,2.08e-10,168;CL:0000738,2.17e-09,136;CL:0002032,2.97e-09,161;CL:0000837,2.97e-09,161;CL:0000988,3.37e-09,177;CL:0002031,8.66e-09,120;CL:0002368,5.09e-08,13;CL:0000235,3.45e-07,6|ontology_enrichment_development_v019=CL:0002057;1.52e-17;42!CL:0000049;5.68e-08;108!CL:0000223;3.81e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.31e-15!102;UBERON:0003061!1.31e-15!102;UBERON:0002371!2.08e-15!80;UBERON:0002405!3.42e-15!115;UBERON:0002193!6.88e-14!112;UBERON:0001474!2.20e-12!86;UBERON:0004765!5.33e-12!101;UBERON:0001434!5.33e-12!101;UBERON:0002204!1.58e-11!167;UBERON:0000467!9.74e-10!625;UBERON:0000480!1.47e-09!626;UBERON:0000468!2.51e-08!659;UBERON:0002050!2.90e-08!605;UBERON:0005423!2.90e-08!605;UBERON:0000923!3.35e-08!604;UBERON:0005291!3.35e-08!604;UBERON:0006598!3.35e-08!604;UBERON:0002532!3.35e-08!604;UBERON:0000922!8.09e-08!612;UBERON:0000062!8.91e-08!511;UBERON:0007023!3.40e-07!115;UBERON:0003081!7.91e-07!216|ontology_enrichment_uberon_v019=UBERON:0002365;2.30e-07;31!UBERON:0002330;2.30e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-25,76;UBERON:0002390,1.17e-24,98;UBERON:0003061,1.17e-24,98;UBERON:0004765,9.86e-23,90;UBERON:0001474,2.93e-22,82;UBERON:0002193,9.44e-22,108;UBERON:0002405,2.26e-20,93;UBERON:0001434,5.17e-19,100;UBERON:0002204,8.83e-11,167;UBERON:0002050,1.90e-09,564;UBERON:0005423,6.65e-09,581;UBERON:0000923,1.91e-08,560;UBERON:0010316,1.91e-08,560;UBERON:0005291,1.91e-08,560;UBERON:0006598,1.91e-08,560;UBERON:0010317,1.91e-08,560;UBERON:0002532,1.91e-08,560;UBERON:0003081,5.89e-08,203;UBERON:0000922,7.66e-08,592;UBERON:0002365,1.21e-07,31;UBERON:0002330,1.21e-07,31|phase1_expression=0.363356758541113,0.214100523890983,0.845726424575827,0,2.68176656656373,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0.125542639594803,0,0,0,3.93364276848904,6.52509976765262,6.34746105595912,22.0661093874943,15.0602959389125,33.6476149251777,0,0,1.46800219667424,10.5259127621057,9.02450013615638,10.199510923645,21.0480545785529,12.9557466407592,21.1211965460033,2.61716829803216,4.1566353805769,4.12392904019288,3.48643555358527,6.16751832032739,5.26500830521676,13.5215424391411,21.2613386419154,11.8241114944293,4.13694816883942,6.45484683583826,2.70852973188684,2.82363509313907,2.72906150057846,3.59557575112135,3.36692281607993,4.17207735198922,3.19668562899521,14.8433085084022,21.7415386807579,20.885012776102,6.09439401120026,4.53908179752912,2.4912889959823,11.5574386018102,16.6874533894464,11.9453864587814,2.42159801053347,3.31449872388808,6.0127853613768,4.01385043992689,2.33864729961548,4.61249020118427,13.9287502621654,13.2155665700526,14.3045772160401,0.285012743741249,0.19891667719909,0,0,0,0,1.28019066769952,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,2.64342657158052,0,2.10707267820062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.602300476311091,0.383959833463255,0,0.236777252044017,0,0,0,0,0,11.4019146149618,6.00954040664593,0.361439152384566,1.00267582127178,1.15877215168659,0,0,0,0,0.175669571386252,4.71524671791765,0,0,4.86821090482025,5.57215159357655,6.51494006542439,1.43094374583205,0,1.85728750664782,0,0,0,0,0,0,0.208994966536811,0,0,0,0.805658634218294,0.760272105718513,0.488124115096339,0.367663080345869,0,0.17859945656816,0.22452937262617,0.337834441449967,1.53316637465883,0,0.183201743930407,0,0,19.624232346414,0.496971951695318,0,0.264818361626438,0,0.354668382198357,0,0,0.49333509683432,0.3112110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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13446 | |||
|TSSclassifier=S | |||
|UniProt=Q9NRM0 | |||
|association_with_transcript=0bp_to_NM_020041,uc003gmc.2_5end | |||
|coexpression_cluster_id=C4354 | |||
|description=CAGE_peak_1_at_SLC2A9_5end | |||
|id=chr4:10023114..10023128,- | |||
|ontology_enrichment_celltype=CL:0002194!2.57e-22!63;CL:0000576!2.57e-22!63;CL:0000040!2.57e-22!63;CL:0000559!2.57e-22!63;CL:0002009!1.09e-20!65;CL:0000557!7.49e-19!71;CL:0000839!2.37e-18!70;CL:0000766!1.13e-17!76;CL:0002057!1.96e-17!42;CL:0000860!7.70e-15!45;CL:0000763!3.71e-14!112;CL:0000049!3.71e-14!112;CL:0002076!4.57e-08!43;CL:0000223!7.60e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.79e-22;39!CL:0000234;2.79e-22;39!CL:0000860;7.65e-21;33!CL:0002057;7.65e-21;33!CL:0000576;3.49e-19;48!CL:0000766;1.47e-12;69!CL:0002076;7.84e-09;42!CL:0000763;2.11e-08;100!CL:0002368;4.99e-08;13!CL:0000235;3.50e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.97e-35,59;CL:0000576,4.97e-35,59;CL:0000040,4.97e-35,59;CL:0000559,4.97e-35,59;CL:0002009,3.48e-33,61;CL:0000557,7.81e-30,67;CL:0000473,3.38e-29,48;CL:0000234,3.38e-29,48;CL:0000839,4.40e-29,66;CL:0000766,7.76e-29,72;CL:0000860,1.06e-23,42;CL:0002057,1.06e-23,42;CL:0000763,3.40e-23,108;CL:0000049,3.40e-23,108;CL:0000223,5.96e-12,58;CL:0002087,9.04e-12,115;CL:0002076,6.74e-11,42;CL:0000037,2.08e-10,168;CL:0000738,2.17e-09,136;CL:0002032,2.97e-09,161;CL:0000837,2.97e-09,161;CL:0000988,3.37e-09,177;CL:0002031,8.66e-09,120;CL:0002368,5.09e-08,13;CL:0000235,3.45e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-17;42!CL:0000049;5.68e-08;108!CL:0000223;3.81e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-15!102;UBERON:0003061!1.31e-15!102;UBERON:0002371!2.08e-15!80;UBERON:0002405!3.42e-15!115;UBERON:0002193!6.88e-14!112;UBERON:0001474!2.20e-12!86;UBERON:0004765!5.33e-12!101;UBERON:0001434!5.33e-12!101;UBERON:0002204!1.58e-11!167;UBERON:0000467!9.74e-10!625;UBERON:0000480!1.47e-09!626;UBERON:0000468!2.51e-08!659;UBERON:0002050!2.90e-08!605;UBERON:0005423!2.90e-08!605;UBERON:0000923!3.35e-08!604;UBERON:0005291!3.35e-08!604;UBERON:0006598!3.35e-08!604;UBERON:0002532!3.35e-08!604;UBERON:0000922!8.09e-08!612;UBERON:0000062!8.91e-08!511;UBERON:0007023!3.40e-07!115;UBERON:0003081!7.91e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.30e-07;31!UBERON:0002330;2.30e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-25,76;UBERON:0002390,1.17e-24,98;UBERON:0003061,1.17e-24,98;UBERON:0004765,9.86e-23,90;UBERON:0001474,2.93e-22,82;UBERON:0002193,9.44e-22,108;UBERON:0002405,2.26e-20,93;UBERON:0001434,5.17e-19,100;UBERON:0002204,8.83e-11,167;UBERON:0002050,1.90e-09,564;UBERON:0005423,6.65e-09,581;UBERON:0000923,1.91e-08,560;UBERON:0010316,1.91e-08,560;UBERON:0005291,1.91e-08,560;UBERON:0006598,1.91e-08,560;UBERON:0010317,1.91e-08,560;UBERON:0002532,1.91e-08,560;UBERON:0003081,5.89e-08,203;UBERON:0000922,7.66e-08,592;UBERON:0002365,1.21e-07,31;UBERON:0002330,1.21e-07,31 | |||
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| |||
|short_description=p1@SLC2A9 | |||
}} |
Revision as of 01:44, 13 September 2013
Short description: | p1@SLC2A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLC2A9_5end |
Coexpression cluster: | C4354_Small_Prostate_Mallassezderived_Urothelial_Sebocyte_Keratinocyte_Macrophage |
Association with transcript: | 0bp_to_NM_020041, uc003gmc.2_5end |
EntrezGene: | SLC2A9 |
HGNC: | 13446 |
UniProt: | Q9NRM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.97e-35 | 59 |
monocyte | 4.97e-35 | 59 |
monoblast | 4.97e-35 | 59 |
promonocyte | 4.97e-35 | 59 |
macrophage dendritic cell progenitor | 3.48e-33 | 61 |
granulocyte monocyte progenitor cell | 7.81e-30 | 67 |
defensive cell | 3.38e-29 | 48 |
phagocyte | 3.38e-29 | 48 |
myeloid lineage restricted progenitor cell | 4.40e-29 | 66 |
myeloid leukocyte | 7.76e-29 | 72 |
classical monocyte | 1.06e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-23 | 42 |
myeloid cell | 3.40e-23 | 108 |
common myeloid progenitor | 3.40e-23 | 108 |
endodermal cell | 5.96e-12 | 58 |
nongranular leukocyte | 9.04e-12 | 115 |
endo-epithelial cell | 6.74e-11 | 42 |
hematopoietic stem cell | 2.08e-10 | 168 |
leukocyte | 2.17e-09 | 136 |
hematopoietic oligopotent progenitor cell | 2.97e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.97e-09 | 161 |
hematopoietic cell | 3.37e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 8.66e-09 | 120 |
respiratory epithelial cell | 5.09e-08 | 13 |
macrophage | 3.45e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-25 | 76 |
hematopoietic system | 1.17e-24 | 98 |
blood island | 1.17e-24 | 98 |
skeletal element | 9.86e-23 | 90 |
bone element | 2.93e-22 | 82 |
hemolymphoid system | 9.44e-22 | 108 |
immune system | 2.26e-20 | 93 |
skeletal system | 5.17e-19 | 100 |
musculoskeletal system | 8.83e-11 | 167 |
embryonic structure | 1.90e-09 | 564 |
developing anatomical structure | 6.65e-09 | 581 |
germ layer | 1.91e-08 | 560 |
germ layer / neural crest | 1.91e-08 | 560 |
embryonic tissue | 1.91e-08 | 560 |
presumptive structure | 1.91e-08 | 560 |
germ layer / neural crest derived structure | 1.91e-08 | 560 |
epiblast (generic) | 1.91e-08 | 560 |
lateral plate mesoderm | 5.89e-08 | 203 |
embryo | 7.66e-08 | 592 |
exocrine gland | 1.21e-07 | 31 |
exocrine system | 1.21e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.