FFCP PHASE1:Hg19::chr4:87770497..87770508,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=345274|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30603|TSSclassifier=S|UniProt=Q3KNW5|association_with_transcript=-81bp_to_ENST00000273905,NM_197965,uc003hqd.2_5end|description=CAGE_peak_3_at_SLC10A6_5end|id=chr4:87770497..87770508,-|ontology_enrichment_celltype=CL:0000622!1.90e-11!5;CL:0000362!4.15e-11!8;CL:0000154!1.55e-09!6;CL:0002159!3.23e-09!13;CL:0000317!4.83e-08!2;CL:1000448!4.83e-08!2;CL:0002308!4.83e-08!2;CL:0002140!4.83e-08!2;CL:0000312!3.81e-07!5|ontology_enrichment_celltype_v019=CL:0000312;1.41e-30;5!CL:0000362;5.88e-30;9!CL:0000240;1.30e-25;6!CL:0000311;1.30e-25;6!CL:0000079;1.30e-25;6!CL:0000237;1.30e-25;6!CL:0002159;2.01e-19;14!CL:0000622;2.85e-14;5!CL:0000154;4.68e-12;6!CL:0000317;9.46e-10;2!CL:1000448;9.46e-10;2!CL:0002308;9.46e-10;2!CL:0002140;9.46e-10;2!CL:0000150;2.42e-08;9!CL:0002077;2.94e-08;34!CL:0002328;8.86e-07;3!CL:0002621;8.86e-07;3!CL:0002623;8.86e-07;3|ontology_enrichment_celltype_v019_2=CL:0000312,1.16e-30,5;CL:0000362,5.07e-30,9;CL:0000240,1.10e-25,6;CL:0000311,1.10e-25,6;CL:0000079,1.10e-25,6;CL:0000237,1.10e-25,6;CL:0000036,1.10e-25,6;CL:0000357,1.10e-25,6;CL:0000114,1.10e-25,6;CL:0002159,1.83e-19,14;CL:0000622,3.60e-14,5;CL:0000154,5.68e-12,6;CL:0000317,9.46e-10,2;CL:1000448,9.46e-10,2;CL:0002308,9.46e-10,2;CL:0002140,9.46e-10,2;CL:0000150,2.75e-08,9;CL:0002077,3.35e-08,34;CL:0002621,9.64e-07,3|ontology_enrichment_development_v019=CL:0000357;1.30e-25;6!CL:0000114;1.30e-25;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.51e-19!115;UBERON:0002419!4.83e-08!2;UBERON:0007771!4.83e-08!2;UBERON:0003297!4.83e-08!2;UBERON:0001821!4.83e-08!2;UBERON:0003487!4.83e-08!2;UBERON:0001820!4.83e-08!2;UBERON:0005089!4.83e-08!2;UBERON:0005088!4.83e-08!2;UBERON:0001004!7.50e-08!72;UBERON:0002950!1.28e-07!2;UBERON:0001891!1.28e-07!2;UBERON:0009616!1.28e-07!2;UBERON:0003127!1.41e-07!2;UBERON:0000007!1.56e-07!2|ontology_enrichment_uberon_v019=UBERON:0001003;3.73e-18;15!UBERON:0007376;3.73e-18;15!UBERON:0002426;9.48e-18;1!UBERON:0003831;9.48e-18;1!UBERON:0003898;9.48e-18;1!UBERON:0004830;9.48e-18;1!UBERON:0003830;9.48e-18;1!UBERON:0005175;9.48e-18;1!UBERON:0001774;9.48e-18;1!UBERON:0001103;9.48e-18;1!UBERON:0010371;5.41e-13;31!UBERON:0002419;9.46e-10;2!UBERON:0007771;9.46e-10;2!UBERON:0003297;9.46e-10;2!UBERON:0001821;9.46e-10;2!UBERON:0003487;9.46e-10;2!UBERON:0001820;9.46e-10;2!UBERON:0001255;1.51e-09;2!UBERON:0005090;1.51e-09;2!UBERON:0001630;1.51e-09;2!UBERON:0001556;1.51e-09;2!UBERON:0001443;6.54e-07;11!UBERON:0004815;8.86e-07;3!UBERON:0002031;8.86e-07;3!UBERON:0001949;8.86e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001003,3.41e-18,15;UBERON:0007376,3.41e-18,15;UBERON:0007383,3.41e-18,15;UBERON:0002426,5.26e-18,1;UBERON:0003831,5.26e-18,1;UBERON:0003898,5.26e-18,1;UBERON:0004830,5.26e-18,1;UBERON:0003830,5.26e-18,1;UBERON:0005175,5.26e-18,1;UBERON:0001774,5.26e-18,1;UBERON:0001103,5.26e-18,1;UBERON:0010084,5.26e-18,1;UBERON:0002419,9.46e-10,2;UBERON:0007771,9.46e-10,2;UBERON:0003297,9.46e-10,2;UBERON:0001821,9.46e-10,2;UBERON:0003487,9.46e-10,2;UBERON:0001820,9.46e-10,2;UBERON:0005089,9.46e-10,2;UBERON:0005088,9.46e-10,2;UBERON:0005090,1.12e-09,2;UBERON:0001630,1.12e-09,2;UBERON:0001255,1.57e-09,2;UBERON:0001556,1.57e-09,2;UBERON:0003102,8.59e-08,99;UBERON:0001443,5.64e-07,11;UBERON:0002097,7.71e-07,41;UBERON:0001949,9.64e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,4.49607013030478,2.01057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0.574265537996172,3.25030123018261,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8347699159725,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17691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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=345274 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30603 | |||
|TSSclassifier=S | |||
|UniProt=Q3KNW5 | |||
|association_with_transcript=-81bp_to_ENST00000273905,NM_197965,uc003hqd.2_5end | |||
|description=CAGE_peak_3_at_SLC10A6_5end | |||
|id=chr4:87770497..87770508,- | |||
|ontology_enrichment_celltype=CL:0000622!1.90e-11!5;CL:0000362!4.15e-11!8;CL:0000154!1.55e-09!6;CL:0002159!3.23e-09!13;CL:0000317!4.83e-08!2;CL:1000448!4.83e-08!2;CL:0002308!4.83e-08!2;CL:0002140!4.83e-08!2;CL:0000312!3.81e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000312;1.41e-30;5!CL:0000362;5.88e-30;9!CL:0000240;1.30e-25;6!CL:0000311;1.30e-25;6!CL:0000079;1.30e-25;6!CL:0000237;1.30e-25;6!CL:0002159;2.01e-19;14!CL:0000622;2.85e-14;5!CL:0000154;4.68e-12;6!CL:0000317;9.46e-10;2!CL:1000448;9.46e-10;2!CL:0002308;9.46e-10;2!CL:0002140;9.46e-10;2!CL:0000150;2.42e-08;9!CL:0002077;2.94e-08;34!CL:0002328;8.86e-07;3!CL:0002621;8.86e-07;3!CL:0002623;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,1.16e-30,5;CL:0000362,5.07e-30,9;CL:0000240,1.10e-25,6;CL:0000311,1.10e-25,6;CL:0000079,1.10e-25,6;CL:0000237,1.10e-25,6;CL:0000036,1.10e-25,6;CL:0000357,1.10e-25,6;CL:0000114,1.10e-25,6;CL:0002159,1.83e-19,14;CL:0000622,3.60e-14,5;CL:0000154,5.68e-12,6;CL:0000317,9.46e-10,2;CL:1000448,9.46e-10,2;CL:0002308,9.46e-10,2;CL:0002140,9.46e-10,2;CL:0000150,2.75e-08,9;CL:0002077,3.35e-08,34;CL:0002621,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;1.30e-25;6!CL:0000114;1.30e-25;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.51e-19!115;UBERON:0002419!4.83e-08!2;UBERON:0007771!4.83e-08!2;UBERON:0003297!4.83e-08!2;UBERON:0001821!4.83e-08!2;UBERON:0003487!4.83e-08!2;UBERON:0001820!4.83e-08!2;UBERON:0005089!4.83e-08!2;UBERON:0005088!4.83e-08!2;UBERON:0001004!7.50e-08!72;UBERON:0002950!1.28e-07!2;UBERON:0001891!1.28e-07!2;UBERON:0009616!1.28e-07!2;UBERON:0003127!1.41e-07!2;UBERON:0000007!1.56e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;3.73e-18;15!UBERON:0007376;3.73e-18;15!UBERON:0002426;9.48e-18;1!UBERON:0003831;9.48e-18;1!UBERON:0003898;9.48e-18;1!UBERON:0004830;9.48e-18;1!UBERON:0003830;9.48e-18;1!UBERON:0005175;9.48e-18;1!UBERON:0001774;9.48e-18;1!UBERON:0001103;9.48e-18;1!UBERON:0010371;5.41e-13;31!UBERON:0002419;9.46e-10;2!UBERON:0007771;9.46e-10;2!UBERON:0003297;9.46e-10;2!UBERON:0001821;9.46e-10;2!UBERON:0003487;9.46e-10;2!UBERON:0001820;9.46e-10;2!UBERON:0001255;1.51e-09;2!UBERON:0005090;1.51e-09;2!UBERON:0001630;1.51e-09;2!UBERON:0001556;1.51e-09;2!UBERON:0001443;6.54e-07;11!UBERON:0004815;8.86e-07;3!UBERON:0002031;8.86e-07;3!UBERON:0001949;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,3.41e-18,15;UBERON:0007376,3.41e-18,15;UBERON:0007383,3.41e-18,15;UBERON:0002426,5.26e-18,1;UBERON:0003831,5.26e-18,1;UBERON:0003898,5.26e-18,1;UBERON:0004830,5.26e-18,1;UBERON:0003830,5.26e-18,1;UBERON:0005175,5.26e-18,1;UBERON:0001774,5.26e-18,1;UBERON:0001103,5.26e-18,1;UBERON:0010084,5.26e-18,1;UBERON:0002419,9.46e-10,2;UBERON:0007771,9.46e-10,2;UBERON:0003297,9.46e-10,2;UBERON:0001821,9.46e-10,2;UBERON:0003487,9.46e-10,2;UBERON:0001820,9.46e-10,2;UBERON:0005089,9.46e-10,2;UBERON:0005088,9.46e-10,2;UBERON:0005090,1.12e-09,2;UBERON:0001630,1.12e-09,2;UBERON:0001255,1.57e-09,2;UBERON:0001556,1.57e-09,2;UBERON:0003102,8.59e-08,99;UBERON:0001443,5.64e-07,11;UBERON:0002097,7.71e-07,41;UBERON:0001949,9.64e-07,3 | |||
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|short_description=p3@SLC10A6 | |||
}} |
Revision as of 12:10, 13 September 2013
Short description: | p3@SLC10A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLC10A6_5end |
Coexpression cluster: | NA |
Association with transcript: | -81bp_to_ENST00000273905, NM_197965, uc003hqd.2_5end |
EntrezGene: | SLC10A6 |
HGNC: | 30603 |
UniProt: | Q3KNW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 1.16e-30 | 5 |
epidermal cell | 5.07e-30 | 9 |
stratified squamous epithelial cell | 1.10e-25 | 6 |
keratin accumulating cell | 1.10e-25 | 6 |
stratified epithelial cell | 1.10e-25 | 6 |
keratinizing barrier epithelial cell | 1.10e-25 | 6 |
epithelial fate stem cell | 1.10e-25 | 6 |
stratified epithelial stem cell | 1.10e-25 | 6 |
surface ectodermal cell | 1.10e-25 | 6 |
general ecto-epithelial cell | 1.83e-19 | 14 |
acinar cell | 3.60e-14 | 5 |
protein secreting cell | 5.68e-12 | 6 |
sebum secreting cell | 9.46e-10 | 2 |
epithelial cell of sweat gland | 9.46e-10 | 2 |
epithelial cell of skin gland | 9.46e-10 | 2 |
acinar cell of sebaceous gland | 9.46e-10 | 2 |
glandular epithelial cell | 2.75e-08 | 9 |
ecto-epithelial cell | 3.35e-08 | 34 |
gingival epithelial cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 3.41e-18 | 15 |
outer epithelium | 3.41e-18 | 15 |
enveloping layer of ectoderm | 3.41e-18 | 15 |
chest muscle | 5.26e-18 | 1 |
respiratory system muscle | 5.26e-18 | 1 |
skeletal muscle of trunk | 5.26e-18 | 1 |
respiratory system skeletal muscle | 5.26e-18 | 1 |
thoracic segment muscle | 5.26e-18 | 1 |
chest organ | 5.26e-18 | 1 |
muscle of trunk | 5.26e-18 | 1 |
diaphragm | 5.26e-18 | 1 |
future diaphragm | 5.26e-18 | 1 |
skin gland | 9.46e-10 | 2 |
epidermis gland | 9.46e-10 | 2 |
gland of integumental system | 9.46e-10 | 2 |
sebaceous gland | 9.46e-10 | 2 |
skin sebaceous gland | 9.46e-10 | 2 |
sweat gland | 9.46e-10 | 2 |
sweat gland placode | 9.46e-10 | 2 |
sebaceous gland placode | 9.46e-10 | 2 |
muscle structure | 1.12e-09 | 2 |
muscle organ | 1.12e-09 | 2 |
urinary bladder | 1.57e-09 | 2 |
lower urinary tract | 1.57e-09 | 2 |
surface structure | 8.59e-08 | 99 |
chest | 5.64e-07 | 11 |
skin of body | 7.71e-07 | 41 |
gingival epithelium | 9.64e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.