FFCP PHASE1:Mm9::chr17:80011178..80011198,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=55|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:80011178..80011198,+|id=chr17:80011178..80011198,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.18e-28!18;UBERON:0005564!1.18e-28!18;UBERON:0004176!1.33e-26!17;UBERON:0009196!1.33e-26!17;UBERON:0009117!1.33e-26!17;UBERON:0000473!6.63e-21!14;UBERON:0003133!1.83e-20!24;UBERON:0003135!2.55e-19!15;UBERON:0005156!1.41e-18!26;UBERON:0000990!1.41e-18!26;UBERON:0003101!6.21e-18!16;UBERON:0000079!6.21e-18!16;UBERON:0002369!4.09e-17!7;UBERON:0006858!4.09e-17!7;UBERON:0002323!7.18e-12!37;UBERON:0004458!7.18e-12!37;UBERON:0002342!1.39e-11!10;UBERON:0005062!1.39e-11!10;UBERON:0003886!1.87e-11!38;UBERON:0002553!4.62e-11!39;UBERON:0003064!7.02e-10!14;UBERON:0000464!2.66e-07!57;UBERON:0000992!3.24e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000991,8.31e-33,18;UBERON:0005564,8.31e-33,18;UBERON:0002369,1.12e-32,7;UBERON:0006858,1.12e-32,7;UBERON:0000473,2.34e-29,14;UBERON:0004176,3.57e-29,17;UBERON:0009196,3.57e-29,17;UBERON:0009117,3.57e-29,17;UBERON:0003135,2.61e-27,15;UBERON:0003101,1.62e-25,16;UBERON:0000079,1.62e-25,16;UBERON:0003133,3.69e-24,24;UBERON:0005156,3.68e-22,26;UBERON:0000990,3.68e-22,26;UBERON:0003064,5.64e-16,14;UBERON:0002323,5.06e-15,37;UBERON:0004458,5.06e-15,37;UBERON:0003886,1.41e-14,38;UBERON:0002553,3.72e-14,39;UBERON:0000926,8.46e-11,120;UBERON:0004120,8.46e-11,120;UBERON:0006603,8.46e-11,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,85.0573456841446,13.0113995074602,28.9242204396534,42.6638669923708,78.0743278062585,64.6737889246376,36.5689780769356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7719937377363,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71372768914593,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3616262202036,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,11.2137409532984,7.61109056102649,5.83353565032143,5.03723311563151,9.2925869019928,4.22486059124714,4.1665403150064,5.34782656571125,1.69108884578204,2.88030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.565879024158229,0,0.192075457214608,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr17:80011178..80011198,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=55 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:80011178..80011198,+ | |||
|id=chr17:80011178..80011198,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.18e-28!18;UBERON:0005564!1.18e-28!18;UBERON:0004176!1.33e-26!17;UBERON:0009196!1.33e-26!17;UBERON:0009117!1.33e-26!17;UBERON:0000473!6.63e-21!14;UBERON:0003133!1.83e-20!24;UBERON:0003135!2.55e-19!15;UBERON:0005156!1.41e-18!26;UBERON:0000990!1.41e-18!26;UBERON:0003101!6.21e-18!16;UBERON:0000079!6.21e-18!16;UBERON:0002369!4.09e-17!7;UBERON:0006858!4.09e-17!7;UBERON:0002323!7.18e-12!37;UBERON:0004458!7.18e-12!37;UBERON:0002342!1.39e-11!10;UBERON:0005062!1.39e-11!10;UBERON:0003886!1.87e-11!38;UBERON:0002553!4.62e-11!39;UBERON:0003064!7.02e-10!14;UBERON:0000464!2.66e-07!57;UBERON:0000992!3.24e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,8.31e-33,18;UBERON:0005564,8.31e-33,18;UBERON:0002369,1.12e-32,7;UBERON:0006858,1.12e-32,7;UBERON:0000473,2.34e-29,14;UBERON:0004176,3.57e-29,17;UBERON:0009196,3.57e-29,17;UBERON:0009117,3.57e-29,17;UBERON:0003135,2.61e-27,15;UBERON:0003101,1.62e-25,16;UBERON:0000079,1.62e-25,16;UBERON:0003133,3.69e-24,24;UBERON:0005156,3.68e-22,26;UBERON:0000990,3.68e-22,26;UBERON:0003064,5.64e-16,14;UBERON:0002323,5.06e-15,37;UBERON:0004458,5.06e-15,37;UBERON:0003886,1.41e-14,38;UBERON:0002553,3.72e-14,39;UBERON:0000926,8.46e-11,120;UBERON:0004120,8.46e-11,120;UBERON:0006603,8.46e-11,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,85.0573456841446,13.0113995074602,28.9242204396534,42.6638669923708,78.0743278062585,64.6737889246376,36.5689780769356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7719937377363,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71372768914593,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3616262202036,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,11.2137409532984,7.61109056102649,5.83353565032143,5.03723311563151,9.2925869019928,4.22486059124714,4.1665403150064,5.34782656571125,1.69108884578204,2.88030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.565879024158229,0,0.192075457214608,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr17:80011178..80011198,+ | |||
}} |
Revision as of 15:21, 13 September 2013
Short description: | p@chr17:80011178..80011198, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:80011178..80011198, + |
Coexpression cluster: | MCL_coexpression_mm9:55 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 8.31e-33 | 18 |
gonad primordium | 8.31e-33 | 18 |
adrenal gland | 1.12e-32 | 7 |
adrenal/interrenal gland | 1.12e-32 | 7 |
testis | 2.34e-29 | 14 |
external genitalia | 3.57e-29 | 17 |
indifferent external genitalia | 3.57e-29 | 17 |
indifferent gonad | 3.57e-29 | 17 |
male reproductive organ | 2.61e-27 | 15 |
male organism | 1.62e-25 | 16 |
male reproductive system | 1.62e-25 | 16 |
reproductive organ | 3.69e-24 | 24 |
reproductive structure | 3.68e-22 | 26 |
reproductive system | 3.68e-22 | 26 |
intermediate mesoderm | 5.64e-16 | 14 |
body cavity | 5.06e-15 | 37 |
body cavity or lining | 5.06e-15 | 37 |
body cavity precursor | 1.41e-14 | 38 |
anatomical cavity | 3.72e-14 | 39 |
mesoderm | 8.46e-11 | 120 |
mesoderm-derived structure | 8.46e-11 | 120 |
presumptive mesoderm | 8.46e-11 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.