FFCP PHASE1:Hg19::chr5:42950094..42950117,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4501|description=CAGE_peak_at_chr5:42950094..42950117,+|id=chr5:42950094..42950117,+|ontology_enrichment_celltype=CL:0000738!3.31e-54!140;CL:0002031!1.85e-52!124;CL:0000988!2.53e-49!182;CL:0002087!8.74e-49!119;CL:0000037!4.78e-47!172;CL:0000566!4.78e-47!172;CL:0002032!3.20e-45!165;CL:0000837!3.20e-45!165;CL:0000766!1.37e-41!76;CL:0000839!2.18e-41!70;CL:0000557!1.73e-40!71;CL:0002057!3.16e-39!42;CL:0002009!7.47e-39!65;CL:0002194!2.73e-37!63;CL:0000576!2.73e-37!63;CL:0000040!2.73e-37!63;CL:0000559!2.73e-37!63;CL:0000860!2.16e-35!45;CL:0000763!3.79e-33!112;CL:0000049!3.79e-33!112;CL:0000134!2.71e-17!358;CL:0002320!3.63e-17!365;CL:0000219!1.30e-13!390;CL:0000048!9.70e-12!430;CL:0000791!1.96e-11!18;CL:0000789!1.96e-11!18;CL:0002420!1.96e-11!18;CL:0002419!1.96e-11!18;CL:0000790!1.96e-11!18;CL:0000838!4.20e-11!52;CL:0000723!4.87e-11!436;CL:0000034!5.22e-11!444;CL:0000084!6.44e-11!25;CL:0000827!6.44e-11!25;CL:0000542!1.06e-10!53;CL:0000051!1.06e-10!53;CL:0002393!7.63e-09!9;CL:0002397!7.63e-09!9;CL:0000624!2.22e-07!6|ontology_enrichment_celltype_v019=CL:0000860;2.37e-52;33!CL:0002057;2.37e-52;33!CL:0000473;9.90e-41;39!CL:0000234;9.90e-41;39!CL:0000576;1.20e-36;48!CL:0000766;2.62e-26;69!CL:0002087;6.25e-19;104!CL:0000791;5.65e-16;18!CL:0000789;5.65e-16;18!CL:0002419;5.65e-16;18!CL:0000738;1.11e-13;136!CL:0000763;2.34e-13;100!CL:0000084;1.12e-10;25!CL:0000624;3.28e-10;6!CL:0002393;2.12e-09;6!CL:0002397;2.12e-09;6!CL:0000988;3.43e-09;177!CL:0000623;1.11e-08;3!CL:0000898;1.45e-08;3!CL:0000226;4.10e-08;3!CL:0000842;4.10e-08;3!CL:0000767;1.13e-07;3!CL:0000219;2.67e-07;193!CL:0000625;7.57e-07;11|ontology_enrichment_celltype_v019_2=CL:0000860,1.03e-64,42;CL:0002057,1.03e-64,42;CL:0000738,2.53e-63,136;CL:0000473,1.08e-61,48;CL:0000234,1.08e-61,48;CL:0002031,2.42e-59,120;CL:0002087,2.01e-58,115;CL:0000766,3.71e-56,72;CL:0000839,1.15e-53,66;CL:0000037,2.95e-53,168;CL:0000557,1.29e-52,67;CL:0002032,2.16e-50,161;CL:0000837,2.16e-50,161;CL:0002009,4.24e-50,61;CL:0000988,1.27e-49,177;CL:0002194,1.71e-49,59;CL:0000576,1.71e-49,59;CL:0000040,1.71e-49,59;CL:0000559,1.71e-49,59;CL:0000763,2.81e-40,108;CL:0000049,2.81e-40,108;CL:0000134,5.28e-18,354;CL:0002320,2.67e-17,361;CL:0000791,4.40e-16,18;CL:0000789,4.40e-16,18;CL:0002420,4.40e-16,18;CL:0002419,4.40e-16,18;CL:0000790,4.40e-16,18;CL:0000219,7.99e-15,386;CL:0000048,8.06e-12,427;CL:0000034,1.65e-11,441;CL:0000723,2.08e-11,433;CL:0000084,9.41e-11,25;CL:0000827,9.41e-11,25;CL:0000624,2.66e-10,6;CL:0000838,8.07e-10,52;CL:0000542,1.51e-09,53;CL:0000051,1.51e-09,53;CL:0000623,1.12e-08,3;CL:0000825,1.12e-08,3;CL:0000898,1.50e-08,3;CL:0002393,2.30e-08,9;CL:0002397,2.30e-08,9;CL:0000226,4.31e-08,3;CL:0000842,4.31e-08,3;CL:0000767,9.09e-08,3;CL:0000625,7.02e-07,11|ontology_enrichment_development_v019=CL:0002057;1.77e-45;42!CL:0000790;5.65e-16;18!CL:0000049;1.33e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.70e-44!102;UBERON:0003061!6.70e-44!102;UBERON:0002193!9.63e-41!112;UBERON:0002371!3.29e-36!80;UBERON:0001474!1.05e-35!86;UBERON:0004765!1.13e-27!101;UBERON:0001434!1.13e-27!101;UBERON:0002405!3.94e-26!115;UBERON:0002384!1.38e-16!375;UBERON:0003081!6.75e-15!216;UBERON:0002204!3.72e-13!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.97e-47,76;UBERON:0002390,6.50e-46,98;UBERON:0003061,6.50e-46,98;UBERON:0001474,9.00e-43,82;UBERON:0002193,2.28e-40,108;UBERON:0002405,2.65e-40,93;UBERON:0004765,7.26e-38,90;UBERON:0001434,7.75e-33,100;UBERON:0003081,1.07e-17,203;UBERON:0002384,2.44e-16,371;UBERON:0002204,7.79e-15,167;UBERON:0000926,8.12e-07,315;UBERON:0004120,8.12e-07,315;UBERON:0006603,8.12e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.0821005894499457,0.314843125254717,5.90046415273356,4.60595277716655,2.78669021968937,0,0,0,0,0,0,8.86392653651004,5.41470008169383,2.17010870715852,0.223915474239924,0.971680998056939,1.03030227053675,1.16318591023652,0.377875943688809,3.15359279544161,3.0215774797739,0.822335776043652,3.40677007984614,2.58923153089935,1.7931249457037,9.22280696565482,4.13694816883942,1.93645405075148,5.41705946377367,2.63539275359647,1.63743690034707,4.49446968890169,18.977201326996,10.269728866435,24.2948107803636,3.29851300186716,2.19410023383795,6.39337125799041,4.93355705668593,2.26954089876456,6.85104473895132,3.51748131359441,1.5644487552606,15.2032191293582,1.81619850790011,1.10483290796269,7.27863491114034,0.633765858935825,2.33864729961548,1.04829322754188,1.79725809834392,2.70318407114711,1.76798145366788,1.71007646244749,0.59675003159727,0.91332076882317,0,0.546138611262131,0,0,0.400395987036012,0,1.32208974556972,0,0.569212969109448,0,3.4404590531270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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4501 | |||
|description=CAGE_peak_at_chr5:42950094..42950117,+ | |||
|id=chr5:42950094..42950117,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.31e-54!140;CL:0002031!1.85e-52!124;CL:0000988!2.53e-49!182;CL:0002087!8.74e-49!119;CL:0000037!4.78e-47!172;CL:0000566!4.78e-47!172;CL:0002032!3.20e-45!165;CL:0000837!3.20e-45!165;CL:0000766!1.37e-41!76;CL:0000839!2.18e-41!70;CL:0000557!1.73e-40!71;CL:0002057!3.16e-39!42;CL:0002009!7.47e-39!65;CL:0002194!2.73e-37!63;CL:0000576!2.73e-37!63;CL:0000040!2.73e-37!63;CL:0000559!2.73e-37!63;CL:0000860!2.16e-35!45;CL:0000763!3.79e-33!112;CL:0000049!3.79e-33!112;CL:0000134!2.71e-17!358;CL:0002320!3.63e-17!365;CL:0000219!1.30e-13!390;CL:0000048!9.70e-12!430;CL:0000791!1.96e-11!18;CL:0000789!1.96e-11!18;CL:0002420!1.96e-11!18;CL:0002419!1.96e-11!18;CL:0000790!1.96e-11!18;CL:0000838!4.20e-11!52;CL:0000723!4.87e-11!436;CL:0000034!5.22e-11!444;CL:0000084!6.44e-11!25;CL:0000827!6.44e-11!25;CL:0000542!1.06e-10!53;CL:0000051!1.06e-10!53;CL:0002393!7.63e-09!9;CL:0002397!7.63e-09!9;CL:0000624!2.22e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.37e-52;33!CL:0002057;2.37e-52;33!CL:0000473;9.90e-41;39!CL:0000234;9.90e-41;39!CL:0000576;1.20e-36;48!CL:0000766;2.62e-26;69!CL:0002087;6.25e-19;104!CL:0000791;5.65e-16;18!CL:0000789;5.65e-16;18!CL:0002419;5.65e-16;18!CL:0000738;1.11e-13;136!CL:0000763;2.34e-13;100!CL:0000084;1.12e-10;25!CL:0000624;3.28e-10;6!CL:0002393;2.12e-09;6!CL:0002397;2.12e-09;6!CL:0000988;3.43e-09;177!CL:0000623;1.11e-08;3!CL:0000898;1.45e-08;3!CL:0000226;4.10e-08;3!CL:0000842;4.10e-08;3!CL:0000767;1.13e-07;3!CL:0000219;2.67e-07;193!CL:0000625;7.57e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.03e-64,42;CL:0002057,1.03e-64,42;CL:0000738,2.53e-63,136;CL:0000473,1.08e-61,48;CL:0000234,1.08e-61,48;CL:0002031,2.42e-59,120;CL:0002087,2.01e-58,115;CL:0000766,3.71e-56,72;CL:0000839,1.15e-53,66;CL:0000037,2.95e-53,168;CL:0000557,1.29e-52,67;CL:0002032,2.16e-50,161;CL:0000837,2.16e-50,161;CL:0002009,4.24e-50,61;CL:0000988,1.27e-49,177;CL:0002194,1.71e-49,59;CL:0000576,1.71e-49,59;CL:0000040,1.71e-49,59;CL:0000559,1.71e-49,59;CL:0000763,2.81e-40,108;CL:0000049,2.81e-40,108;CL:0000134,5.28e-18,354;CL:0002320,2.67e-17,361;CL:0000791,4.40e-16,18;CL:0000789,4.40e-16,18;CL:0002420,4.40e-16,18;CL:0002419,4.40e-16,18;CL:0000790,4.40e-16,18;CL:0000219,7.99e-15,386;CL:0000048,8.06e-12,427;CL:0000034,1.65e-11,441;CL:0000723,2.08e-11,433;CL:0000084,9.41e-11,25;CL:0000827,9.41e-11,25;CL:0000624,2.66e-10,6;CL:0000838,8.07e-10,52;CL:0000542,1.51e-09,53;CL:0000051,1.51e-09,53;CL:0000623,1.12e-08,3;CL:0000825,1.12e-08,3;CL:0000898,1.50e-08,3;CL:0002393,2.30e-08,9;CL:0002397,2.30e-08,9;CL:0000226,4.31e-08,3;CL:0000842,4.31e-08,3;CL:0000767,9.09e-08,3;CL:0000625,7.02e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-45;42!CL:0000790;5.65e-16;18!CL:0000049;1.33e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.70e-44!102;UBERON:0003061!6.70e-44!102;UBERON:0002193!9.63e-41!112;UBERON:0002371!3.29e-36!80;UBERON:0001474!1.05e-35!86;UBERON:0004765!1.13e-27!101;UBERON:0001434!1.13e-27!101;UBERON:0002405!3.94e-26!115;UBERON:0002384!1.38e-16!375;UBERON:0003081!6.75e-15!216;UBERON:0002204!3.72e-13!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.97e-47,76;UBERON:0002390,6.50e-46,98;UBERON:0003061,6.50e-46,98;UBERON:0001474,9.00e-43,82;UBERON:0002193,2.28e-40,108;UBERON:0002405,2.65e-40,93;UBERON:0004765,7.26e-38,90;UBERON:0001434,7.75e-33,100;UBERON:0003081,1.07e-17,203;UBERON:0002384,2.44e-16,371;UBERON:0002204,7.79e-15,167;UBERON:0000926,8.12e-07,315;UBERON:0004120,8.12e-07,315;UBERON:0006603,8.12e-07,315 | |||
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| |||
|short_description=p@chr5:42950094..42950117,+ | |||
}} |
Revision as of 15:42, 13 September 2013
Short description: | p@chr5:42950094..42950117, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:42950094..42950117, + |
Coexpression cluster: | C4501_Natural_CD14_CD4_CD8_Peripheral_CD34_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.97e-47 | 76 |
hematopoietic system | 6.50e-46 | 98 |
blood island | 6.50e-46 | 98 |
bone element | 9.00e-43 | 82 |
hemolymphoid system | 2.28e-40 | 108 |
immune system | 2.65e-40 | 93 |
skeletal element | 7.26e-38 | 90 |
skeletal system | 7.75e-33 | 100 |
lateral plate mesoderm | 1.07e-17 | 203 |
connective tissue | 2.44e-16 | 371 |
musculoskeletal system | 7.79e-15 | 167 |
mesoderm | 8.12e-07 | 315 |
mesoderm-derived structure | 8.12e-07 | 315 |
presumptive mesoderm | 8.12e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.