FFCP PHASE1:Mm9::chr1:162237482..162237522,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=382|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:162237482..162237522,-|id=chr1:162237482..162237522,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,4.73e-09,32;CL:0002032,4.73e-09,32;CL:0000037,4.73e-09,32;CL:0000837,4.73e-09,32;CL:0000084,6.55e-07,11;CL:0000827,6.55e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!9.44e-11!70;UBERON:0001041!2.51e-10!92;UBERON:0004177!4.35e-10!29;UBERON:0005057!4.82e-10!51;UBERON:0002193!6.73e-10!48;UBERON:0000077!1.34e-09!97;UBERON:0002390!1.64e-09!45;UBERON:0003061!1.64e-09!45;UBERON:0005911!2.82e-08!69;UBERON:0002370!1.20e-07!23;UBERON:0000974!1.20e-07!23;UBERON:0004807!1.20e-07!23;UBERON:0005058!1.20e-07!23;UBERON:0003351!1.20e-07!23;UBERON:0009113!1.20e-07!23;UBERON:0003295!1.20e-07!23;UBERON:0009722!1.20e-07!23;UBERON:0005562!1.20e-07!23;UBERON:0007690!1.20e-07!23;UBERON:0000065!2.22e-07!41;UBERON:0000926!2.32e-07!193;UBERON:0004120!2.32e-07!193;UBERON:0006603!2.32e-07!193;UBERON:0003104!2.95e-07!131;UBERON:0009142!2.95e-07!131;UBERON:0006562!5.65e-07!24;UBERON:0003408!5.65e-07!24;UBERON:0001557!5.65e-07!24;UBERON:0001042!5.65e-07!24;UBERON:0008814!5.65e-07!24;UBERON:0009145!5.65e-07!24;UBERON:0001004!6.37e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.57e-19,29;UBERON:0005057,2.57e-19,29;UBERON:0002390,6.22e-18,45;UBERON:0003061,6.22e-18,45;UBERON:0002193,6.45e-18,48;UBERON:0002405,6.45e-18,48;UBERON:0002370,1.50e-16,23;UBERON:0000974,1.50e-16,23;UBERON:0004807,1.50e-16,23;UBERON:0005058,1.50e-16,23;UBERON:0003351,1.50e-16,23;UBERON:0009113,1.50e-16,23;UBERON:0003295,1.50e-16,23;UBERON:0009722,1.50e-16,23;UBERON:0005562,1.50e-16,23;UBERON:0007690,1.50e-16,23;UBERON:0006562,1.12e-15,24;UBERON:0003408,1.12e-15,24;UBERON:0001557,1.12e-15,24;UBERON:0001042,1.12e-15,24;UBERON:0008814,1.12e-15,24;UBERON:0009145,1.12e-15,24;UBERON:0000077,4.63e-15,35;UBERON:0003929,1.11e-14,55;UBERON:0001041,1.53e-13,80;UBERON:0000072,1.89e-13,27;UBERON:0002368,7.00e-13,60;UBERON:0002530,2.29e-11,65;UBERON:0000490,4.30e-11,66;UBERON:0000949,1.69e-10,72;UBERON:0005911,2.55e-10,69;UBERON:0007811,4.90e-09,36;UBERON:0003081,1.88e-08,87;UBERON:0004921,7.37e-08,114;UBERON:0001007,1.37e-07,116;UBERON:0001555,1.37e-07,116;UBERON:0007026,1.37e-07,116;UBERON:0000065,1.90e-07,41;UBERON:0004119,2.51e-07,118;UBERON:0000925,2.51e-07,118;UBERON:0006595,2.51e-07,118;UBERON:0001004,3.55e-07,42;UBERON:0000153,6.41e-07,43|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.503637815735669,0.233612640595526,1.67860320474049,0.563154888606667,0.936258105287974,0,0,3.76641605848653,4.10875891369288,1.66554880907831,0.809901069559304,0.699561878128147,0.630924330716475,2.19383093769182,0.42438965179803,0.510259740906419,29.2908306042612,27.1647780704493,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0.612508068787107,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0,0,0.34255163915718,2.58937883647172,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0,0.125666591329675,0.247194967734374,0.144599356919912,5.30766331169925,0.808834249737046,1.76673214768315,0.484875253135222,3.72783522436244,0,0,0,16.6543023063229,16.7972764678154,11.3092502095028,0,0,0,0,0,0,0,0,2.23932547098167,0,0,0.260240885925407,0,0,0,0.136072998302656,0,0,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.796137067273973,9.83098462238529,7.20574139921202,4.54661599032948,0.207125772535502,0.938104239924385,0.540186184383045,0.473489471170421,0.196764231747404,0,0,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0,0,0.464473343720877,0,0,0,0.190225626112559,0,0.494096864172033,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,4.67166296005063,3.93117990226406,4.27238013531222,4.26006254915856,1.68824011826692,4.07401362850272,1.43848068725405,2.91843408195064,1.09824565275233,2.87536413054709,0.744281895337007,0.312037673114561,0,0,0,0.739012760666419,0.568474235311454,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0,0.390267295715598,0.472905432318573,0,0.797273843287435,0.983179888294428,0.690739927463582,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0,1.26414703174326,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.704015124191131,0,0,0,0.161464426695906,0,0,0,0.29148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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=382 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:162237482..162237522,- | |||
|id=chr1:162237482..162237522,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.73e-09,32;CL:0002032,4.73e-09,32;CL:0000037,4.73e-09,32;CL:0000837,4.73e-09,32;CL:0000084,6.55e-07,11;CL:0000827,6.55e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!9.44e-11!70;UBERON:0001041!2.51e-10!92;UBERON:0004177!4.35e-10!29;UBERON:0005057!4.82e-10!51;UBERON:0002193!6.73e-10!48;UBERON:0000077!1.34e-09!97;UBERON:0002390!1.64e-09!45;UBERON:0003061!1.64e-09!45;UBERON:0005911!2.82e-08!69;UBERON:0002370!1.20e-07!23;UBERON:0000974!1.20e-07!23;UBERON:0004807!1.20e-07!23;UBERON:0005058!1.20e-07!23;UBERON:0003351!1.20e-07!23;UBERON:0009113!1.20e-07!23;UBERON:0003295!1.20e-07!23;UBERON:0009722!1.20e-07!23;UBERON:0005562!1.20e-07!23;UBERON:0007690!1.20e-07!23;UBERON:0000065!2.22e-07!41;UBERON:0000926!2.32e-07!193;UBERON:0004120!2.32e-07!193;UBERON:0006603!2.32e-07!193;UBERON:0003104!2.95e-07!131;UBERON:0009142!2.95e-07!131;UBERON:0006562!5.65e-07!24;UBERON:0003408!5.65e-07!24;UBERON:0001557!5.65e-07!24;UBERON:0001042!5.65e-07!24;UBERON:0008814!5.65e-07!24;UBERON:0009145!5.65e-07!24;UBERON:0001004!6.37e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.57e-19,29;UBERON:0005057,2.57e-19,29;UBERON:0002390,6.22e-18,45;UBERON:0003061,6.22e-18,45;UBERON:0002193,6.45e-18,48;UBERON:0002405,6.45e-18,48;UBERON:0002370,1.50e-16,23;UBERON:0000974,1.50e-16,23;UBERON:0004807,1.50e-16,23;UBERON:0005058,1.50e-16,23;UBERON:0003351,1.50e-16,23;UBERON:0009113,1.50e-16,23;UBERON:0003295,1.50e-16,23;UBERON:0009722,1.50e-16,23;UBERON:0005562,1.50e-16,23;UBERON:0007690,1.50e-16,23;UBERON:0006562,1.12e-15,24;UBERON:0003408,1.12e-15,24;UBERON:0001557,1.12e-15,24;UBERON:0001042,1.12e-15,24;UBERON:0008814,1.12e-15,24;UBERON:0009145,1.12e-15,24;UBERON:0000077,4.63e-15,35;UBERON:0003929,1.11e-14,55;UBERON:0001041,1.53e-13,80;UBERON:0000072,1.89e-13,27;UBERON:0002368,7.00e-13,60;UBERON:0002530,2.29e-11,65;UBERON:0000490,4.30e-11,66;UBERON:0000949,1.69e-10,72;UBERON:0005911,2.55e-10,69;UBERON:0007811,4.90e-09,36;UBERON:0003081,1.88e-08,87;UBERON:0004921,7.37e-08,114;UBERON:0001007,1.37e-07,116;UBERON:0001555,1.37e-07,116;UBERON:0007026,1.37e-07,116;UBERON:0000065,1.90e-07,41;UBERON:0004119,2.51e-07,118;UBERON:0000925,2.51e-07,118;UBERON:0006595,2.51e-07,118;UBERON:0001004,3.55e-07,42;UBERON:0000153,6.41e-07,43 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.503637815735669,0.233612640595526,1.67860320474049,0.563154888606667,0.936258105287974,0,0,3.76641605848653,4.10875891369288,1.66554880907831,0.809901069559304,0.699561878128147,0.630924330716475,2.19383093769182,0.42438965179803,0.510259740906419,29.2908306042612,27.1647780704493,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0.612508068787107,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0,0,0.34255163915718,2.58937883647172,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0,0.125666591329675,0.247194967734374,0.144599356919912,5.30766331169925,0.808834249737046,1.76673214768315,0.484875253135222,3.72783522436244,0,0,0,16.6543023063229,16.7972764678154,11.3092502095028,0,0,0,0,0,0,0,0,2.23932547098167,0,0,0.260240885925407,0,0,0,0.136072998302656,0,0,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.796137067273973,9.83098462238529,7.20574139921202,4.54661599032948,0.207125772535502,0.938104239924385,0.540186184383045,0.473489471170421,0.196764231747404,0,0,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0,0,0.464473343720877,0,0,0,0.190225626112559,0,0.494096864172033,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,4.67166296005063,3.93117990226406,4.27238013531222,4.26006254915856,1.68824011826692,4.07401362850272,1.43848068725405,2.91843408195064,1.09824565275233,2.87536413054709,0.744281895337007,0.312037673114561,0,0,0,0.739012760666419,0.568474235311454,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0,0.390267295715598,0.472905432318573,0,0.797273843287435,0.983179888294428,0.690739927463582,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0,1.26414703174326,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.704015124191131,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,2.39219233116994,0.412773735926445,0.925972636848558,3.57900068308913,1.50363650493128,1.60144721244566,15.4680371294408,16.794174278839,12.2997976685937,1.90934123603023,0.158167996790568,0,0.432021363287205,0.627264888043406,0.655087691238533,0.674321731924103,0.330613822901344,1.57053565190418,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0.258319646955462,0,0.117357238645754,0,0,0,0,9.79634473947353,1.41907650703115,2.77319584345034,4.28738715826724,7.16106782669926,7.3512101269068,7.57231331975804,7.08909730437971,9.38987984517773,9.29723041190998,11.0908803650525,9.25849867027648,12.7961749381638,11.5708133159753,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.682934423016537,0.729320151204882,0.628839487883947,0.551530525350042,0.44449345560323,1.03017528619447,0,0.505394423527595,0.50695859978048,0.565879024158229,0.468207537349412,0.320125762024346,0.287177344778066,0.476293691283074,0,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.423073039458382,0.182927972872773,0,0.407412341537585,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0,0.935726433781634,0.214871054048298,0.191288332068843,0.882365676478062,0.927471342481686 | |||
|short_description=p@chr1:162237482..162237522,- | |||
}} |
Revision as of 19:24, 13 September 2013
Short description: | p@chr1:162237482..162237522, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:162237482..162237522, - |
Coexpression cluster: | MCL_coexpression_mm9:382 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.73e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.73e-09 | 32 |
hematopoietic stem cell | 4.73e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.73e-09 | 32 |
T cell | 6.55e-07 | 11 |
pro-T cell | 6.55e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.