FFCP PHASE1:Hg19::chr6:30585009..30585028,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5514|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9284|TSSclassifier=S|UniProt=Q96QC0,F5H5K4,Q2L6I0,Q58F28|association_with_transcript=0bp_to_ENST00000376511,ENST00000484449,ENST00000537132,NM_002714,uc003nqn.1,uc010jsc.1_5end|coexpression_cluster_id=C1010|description=CAGE_peak_1_at_PPP1R10_5end|id=chr6:30585009..30585028,-|ontology_enrichment_celltype=CL:0000738!6.36e-38!140;CL:0000037!1.87e-37!172;CL:0000566!1.87e-37!172;CL:0000988!1.00e-36!182;CL:0002032!2.41e-34!165;CL:0000837!2.41e-34!165;CL:0002031!2.84e-30!124;CL:0002087!1.84e-27!119;CL:0002057!9.63e-24!42;CL:0000860!1.47e-21!45;CL:0000763!9.70e-19!112;CL:0000049!9.70e-19!112;CL:0000766!3.66e-18!76;CL:0000542!7.04e-15!53;CL:0000051!7.04e-15!53;CL:0000839!9.49e-15!70;CL:0000838!1.08e-14!52;CL:0000557!4.61e-14!71;CL:0002009!1.29e-12!65;CL:0002194!6.34e-12!63;CL:0000576!6.34e-12!63;CL:0000040!6.34e-12!63;CL:0000559!6.34e-12!63;CL:0000134!4.26e-10!358;CL:0000791!5.31e-10!18;CL:0000789!5.31e-10!18;CL:0002420!5.31e-10!18;CL:0002419!5.31e-10!18;CL:0000790!5.31e-10!18;CL:0002320!2.57e-09!365;CL:0000219!3.08e-09!390;CL:0000236!6.54e-08!14;CL:0000084!1.85e-07!25;CL:0000827!1.85e-07!25;CL:0000625!3.39e-07!11;CL:0000945!4.23e-07!24;CL:0000826!4.23e-07!24|ontology_enrichment_celltype_v019=CL:0000860;1.80e-18;33!CL:0002057;1.80e-18;33!CL:0000576;4.57e-13;48!CL:0002087;1.70e-11;104!CL:0000473;2.27e-11;39!CL:0000234;2.27e-11;39!CL:0000766;2.80e-10;69!CL:0000791;5.29e-10;18!CL:0000789;5.29e-10;18!CL:0002419;5.29e-10;18!CL:0000542;2.79e-09;53!CL:0000738;1.45e-08;136!CL:0000236;6.80e-08;13!CL:0000084;1.80e-07;25!CL:0000988;1.88e-07;177!CL:0000625;3.42e-07;11!CL:0000945;4.49e-07;24|ontology_enrichment_celltype_v019_2=CL:0000738,5.66e-40,136;CL:0000037,3.50e-39,168;CL:0000988,7.34e-39,177;CL:0002032,5.05e-36,161;CL:0000837,5.05e-36,161;CL:0002031,3.51e-32,120;CL:0002087,2.71e-29,115;CL:0000860,9.63e-24,42;CL:0002057,9.63e-24,42;CL:0000763,3.49e-20,108;CL:0000049,3.49e-20,108;CL:0000766,4.65e-20,72;CL:0000473,2.58e-18,48;CL:0000234,2.58e-18,48;CL:0000839,1.81e-16,66;CL:0000557,1.06e-15,67;CL:0000542,7.04e-15,53;CL:0000051,7.04e-15,53;CL:0000838,1.08e-14,52;CL:0002009,3.16e-14,61;CL:0002194,1.68e-13,59;CL:0000576,1.68e-13,59;CL:0000040,1.68e-13,59;CL:0000559,1.68e-13,59;CL:0000134,1.67e-10,354;CL:0000791,5.31e-10,18;CL:0000789,5.31e-10,18;CL:0002420,5.31e-10,18;CL:0002419,5.31e-10,18;CL:0000790,5.31e-10,18;CL:0002320,1.06e-09,361;CL:0000219,1.32e-09,386;CL:0000236,6.54e-08,14;CL:0000084,1.85e-07,25;CL:0000827,1.85e-07,25;CL:0000625,3.39e-07,11;CL:0000945,4.23e-07,24;CL:0000826,4.23e-07,24|ontology_enrichment_development_v019=CL:0002057;2.18e-17;42!CL:0000790;5.29e-10;18!CL:0000051;2.79e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.85e-19!102;UBERON:0003061!7.85e-19!102;UBERON:0002193!1.26e-16!112;UBERON:0001474!1.27e-13!86;UBERON:0002371!2.20e-13!80;UBERON:0002405!1.04e-10!115;UBERON:0002384!1.38e-08!375;UBERON:0004765!1.75e-08!101;UBERON:0001434!1.75e-08!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.19e-20,98;UBERON:0003061,2.19e-20,98;UBERON:0002193,6.02e-18,108;UBERON:0001474,5.28e-15,82;UBERON:0002371,8.00e-15,76;UBERON:0002405,3.62e-14,93;UBERON:0004765,2.06e-10,90;UBERON:0002384,6.04e-09,371;UBERON:0001434,3.81e-08,100;UBERON:0003081,1.72e-07,203|phase1_expression=13.0808433074801,20.3395497696434,15.7868932587488,20.0146596706261,15.6436383049551,8.72338524100369,15.1979926900986,16.4247167090976,26.3797484481837,19.1672470471177,40.4724677424008,25.7760819113603,20.3100573235909,13.7380651785652,18.2268556650354,18.1527789541979,15.6700577286234,13.8758917173601,12.1983199697627,42.5998860945686,35.9041216589885,39.8087496277172,27.7648907517125,19.4361683603496,22.7232177666593,36.2199543245289,36.288460536876,37.545042686625,105.421626195506,68.7054622594011,69.8220716155503,22.9855306119732,52.7110357861938,56.9421175656853,37.4166578802857,32.2724157746447,112.448968265246,60.9394949385065,51.3393785523563,71.3965764655153,42.3200246313457,28.8265362756892,38.8939107127622,113.119829770501,129.611448685262,139.728419244182,133.646696220769,161.588979992578,191.398537213174,119.10465042137,128.592674677609,128.64633305939,194.091818254716,187.836042922893,184.180021768305,110.310010971966,133.724013528344,149.890564124871,150.899358938855,133.827404290731,203.309206004095,82.7926763468657,106.31412951233,72.0319828400253,155.261942666292,186.102353698694,218.610609397447,136.930522564925,149.144114668178,164.629144286478,114.420505997707,184.50709562977,202.535927962166,63.3765858935825,82.2778640864719,75.4771123830153,70.4300517288524,65.6273021717383,80.3627933485401,102.034562259367,93.0930049291742,80.3722276564389,190.075944018229,220.639998949901,234.830443019978,79.3718213973703,239.036404260499,240.821272340928,202.940775944953,280.491803833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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5514 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9284 | |||
|TSSclassifier=S | |||
|UniProt=Q96QC0,F5H5K4,Q2L6I0,Q58F28 | |||
|association_with_transcript=0bp_to_ENST00000376511,ENST00000484449,ENST00000537132,NM_002714,uc003nqn.1,uc010jsc.1_5end | |||
|coexpression_cluster_id=C1010 | |||
|description=CAGE_peak_1_at_PPP1R10_5end | |||
|id=chr6:30585009..30585028,- | |||
|ontology_enrichment_celltype=CL:0000738!6.36e-38!140;CL:0000037!1.87e-37!172;CL:0000566!1.87e-37!172;CL:0000988!1.00e-36!182;CL:0002032!2.41e-34!165;CL:0000837!2.41e-34!165;CL:0002031!2.84e-30!124;CL:0002087!1.84e-27!119;CL:0002057!9.63e-24!42;CL:0000860!1.47e-21!45;CL:0000763!9.70e-19!112;CL:0000049!9.70e-19!112;CL:0000766!3.66e-18!76;CL:0000542!7.04e-15!53;CL:0000051!7.04e-15!53;CL:0000839!9.49e-15!70;CL:0000838!1.08e-14!52;CL:0000557!4.61e-14!71;CL:0002009!1.29e-12!65;CL:0002194!6.34e-12!63;CL:0000576!6.34e-12!63;CL:0000040!6.34e-12!63;CL:0000559!6.34e-12!63;CL:0000134!4.26e-10!358;CL:0000791!5.31e-10!18;CL:0000789!5.31e-10!18;CL:0002420!5.31e-10!18;CL:0002419!5.31e-10!18;CL:0000790!5.31e-10!18;CL:0002320!2.57e-09!365;CL:0000219!3.08e-09!390;CL:0000236!6.54e-08!14;CL:0000084!1.85e-07!25;CL:0000827!1.85e-07!25;CL:0000625!3.39e-07!11;CL:0000945!4.23e-07!24;CL:0000826!4.23e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.80e-18;33!CL:0002057;1.80e-18;33!CL:0000576;4.57e-13;48!CL:0002087;1.70e-11;104!CL:0000473;2.27e-11;39!CL:0000234;2.27e-11;39!CL:0000766;2.80e-10;69!CL:0000791;5.29e-10;18!CL:0000789;5.29e-10;18!CL:0002419;5.29e-10;18!CL:0000542;2.79e-09;53!CL:0000738;1.45e-08;136!CL:0000236;6.80e-08;13!CL:0000084;1.80e-07;25!CL:0000988;1.88e-07;177!CL:0000625;3.42e-07;11!CL:0000945;4.49e-07;24 | |||
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| |||
|short_description=p1@PPP1R10 | |||
}} |
Revision as of 20:02, 13 September 2013
Short description: | p1@PPP1R10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PPP1R10_5end |
Coexpression cluster: | C1010_CD19_Neutrophils_Eosinophils_CD14_Mast_CD8_CD4 |
Association with transcript: | 0bp_to_ENST00000376511, ENST00000484449, ENST00000537132, NM_002714, uc003nqn.1, uc010jsc.1_5end |
EntrezGene: | PPP1R10 |
HGNC: | 9284 |
UniProt: | Q96QC0F5H5K4Q2L6I0Q58F28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.19e-20 | 98 |
blood island | 2.19e-20 | 98 |
hemolymphoid system | 6.02e-18 | 108 |
bone element | 5.28e-15 | 82 |
bone marrow | 8.00e-15 | 76 |
immune system | 3.62e-14 | 93 |
skeletal element | 2.06e-10 | 90 |
connective tissue | 6.04e-09 | 371 |
skeletal system | 3.81e-08 | 100 |
lateral plate mesoderm | 1.72e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.