FFCP PHASE1:Hg19::chr6:31683080..31683091,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=58530|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13935|TSSclassifier=S|UniProt=Q8NDY2,O95868|association_with_transcript=-41bp_to_ENST00000375824,ENST00000375825,ENST00000479334,NM_021246,uc003nwf.1,uc003nwg.1_5end|coexpression_cluster_id=C311|description=CAGE_peak_2_at_LY6G6D_5end|id=chr6:31683080..31683091,+|ontology_enrichment_celltype=CL:0002253!3.91e-23!2;CL:0002563!4.57e-12!4;CL:0002535!9.02e-07!2|ontology_enrichment_celltype_v019=CL:0002253;2.37e-15;2!CL:0000214;1.09e-10;3!CL:0002563;2.43e-08;4|ontology_enrichment_celltype_v019_2=CL:0002253,2.05e-15,2;CL:0000214,1.20e-10,3;CL:0002563,2.26e-08,4|ontology_enrichment_development_v019=UBERON:0003104;3.09e-09;31|ontology_enrichment_disease=DOID:3119!3.97e-13!14|ontology_enrichment_disease_v019=DOID:3119;6.48e-19;14|ontology_enrichment_disease_v019_2=DOID:3119,6.09e-19,14|ontology_enrichment_uberon=UBERON:0001052!6.67e-45!4;UBERON:0004907!5.14e-36!5;UBERON:0000059!3.57e-25!11;UBERON:0006947!1.06e-15!3;UBERON:0004054!1.06e-15!3;UBERON:0001046!1.26e-14!19;UBERON:0007029!7.89e-13!1;UBERON:0000998!1.96e-12!1;UBERON:0006868!1.96e-12!1;UBERON:0001000!2.20e-12!1;UBERON:0005352!2.20e-12!1;UBERON:0001242!4.57e-12!4;UBERON:0001262!4.57e-12!4;UBERON:0004786!4.57e-12!4;UBERON:0004808!4.57e-12!4;UBERON:0001277!4.57e-12!4;UBERON:0002581!4.81e-12!1;UBERON:0005904!5.10e-12!4;UBERON:0001155!1.36e-11!9;UBERON:0000160!7.27e-10!27;UBERON:0003350!7.77e-10!5;UBERON:0003135!1.43e-09!11;UBERON:0003101!3.17e-08!22;UBERON:0000079!3.17e-08!22;UBERON:0000002!3.63e-08!6;UBERON:0001560!3.63e-08!6;UBERON:0005409!1.21e-07!35;UBERON:0004175!3.09e-07!25;UBERON:0006955!9.02e-07!2;UBERON:0004801!9.02e-07!2|ontology_enrichment_uberon_v019=UBERON:0007029;9.99e-30;1!UBERON:0001052;3.16e-29;4!UBERON:0004907;1.28e-23;5!UBERON:0000059;2.55e-11;11!UBERON:0006915;1.09e-10;3!UBERON:0007616;1.09e-10;3!UBERON:0002217;1.09e-10;3!UBERON:0002018;1.09e-10;3!UBERON:0000014;1.82e-08;4!UBERON:0001242;2.43e-08;4!UBERON:0001262;2.43e-08;4!UBERON:0004786;2.43e-08;4!UBERON:0004808;2.43e-08;4!UBERON:0001277;2.43e-08;4!UBERON:0000160;2.77e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0007029,9.99e-30,1;UBERON:0001052,2.74e-29,4;UBERON:0004907,1.14e-23,5;UBERON:0000059,2.42e-11,11;UBERON:0006915,1.20e-10,3;UBERON:0007616,1.20e-10,3;UBERON:0002217,1.20e-10,3;UBERON:0002018,1.20e-10,3;UBERON:0000014,1.82e-08,4;UBERON:0001242,2.26e-08,4;UBERON:0001262,2.26e-08,4;UBERON:0004786,2.26e-08,4;UBERON:0004808,2.26e-08,4;UBERON:0001277,2.26e-08,4;UBERON:0000160,2.68e-07,17;UBERON:0001046,5.84e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90012867315194,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,1.94749775767882,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.39246546425257,0,36.9959255574202,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,5.34282092365053,0,2.58636007709779,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@LY6G6D}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=58530 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13935 | |||
|TSSclassifier=S | |||
|UniProt=Q8NDY2,O95868 | |||
|association_with_transcript=-41bp_to_ENST00000375824,ENST00000375825,ENST00000479334,NM_021246,uc003nwf.1,uc003nwg.1_5end | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_2_at_LY6G6D_5end | |||
|id=chr6:31683080..31683091,+ | |||
|ontology_enrichment_celltype=CL:0002253!3.91e-23!2;CL:0002563!4.57e-12!4;CL:0002535!9.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002253;2.37e-15;2!CL:0000214;1.09e-10;3!CL:0002563;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.05e-15,2;CL:0000214,1.20e-10,3;CL:0002563,2.26e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.09e-09;31 | |||
|ontology_enrichment_disease=DOID:3119!3.97e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;6.48e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,6.09e-19,14 | |||
|ontology_enrichment_uberon=UBERON:0001052!6.67e-45!4;UBERON:0004907!5.14e-36!5;UBERON:0000059!3.57e-25!11;UBERON:0006947!1.06e-15!3;UBERON:0004054!1.06e-15!3;UBERON:0001046!1.26e-14!19;UBERON:0007029!7.89e-13!1;UBERON:0000998!1.96e-12!1;UBERON:0006868!1.96e-12!1;UBERON:0001000!2.20e-12!1;UBERON:0005352!2.20e-12!1;UBERON:0001242!4.57e-12!4;UBERON:0001262!4.57e-12!4;UBERON:0004786!4.57e-12!4;UBERON:0004808!4.57e-12!4;UBERON:0001277!4.57e-12!4;UBERON:0002581!4.81e-12!1;UBERON:0005904!5.10e-12!4;UBERON:0001155!1.36e-11!9;UBERON:0000160!7.27e-10!27;UBERON:0003350!7.77e-10!5;UBERON:0003135!1.43e-09!11;UBERON:0003101!3.17e-08!22;UBERON:0000079!3.17e-08!22;UBERON:0000002!3.63e-08!6;UBERON:0001560!3.63e-08!6;UBERON:0005409!1.21e-07!35;UBERON:0004175!3.09e-07!25;UBERON:0006955!9.02e-07!2;UBERON:0004801!9.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;9.99e-30;1!UBERON:0001052;3.16e-29;4!UBERON:0004907;1.28e-23;5!UBERON:0000059;2.55e-11;11!UBERON:0006915;1.09e-10;3!UBERON:0007616;1.09e-10;3!UBERON:0002217;1.09e-10;3!UBERON:0002018;1.09e-10;3!UBERON:0000014;1.82e-08;4!UBERON:0001242;2.43e-08;4!UBERON:0001262;2.43e-08;4!UBERON:0004786;2.43e-08;4!UBERON:0004808;2.43e-08;4!UBERON:0001277;2.43e-08;4!UBERON:0000160;2.77e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,9.99e-30,1;UBERON:0001052,2.74e-29,4;UBERON:0004907,1.14e-23,5;UBERON:0000059,2.42e-11,11;UBERON:0006915,1.20e-10,3;UBERON:0007616,1.20e-10,3;UBERON:0002217,1.20e-10,3;UBERON:0002018,1.20e-10,3;UBERON:0000014,1.82e-08,4;UBERON:0001242,2.26e-08,4;UBERON:0001262,2.26e-08,4;UBERON:0004786,2.26e-08,4;UBERON:0004808,2.26e-08,4;UBERON:0001277,2.26e-08,4;UBERON:0000160,2.68e-07,17;UBERON:0001046,5.84e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90012867315194,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,1.94749775767882,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.39246546425257,0,36.9959255574202,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,5.34282092365053,0,2.58636007709779,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LY6G6D | |||
}} |
Revision as of 20:16, 13 September 2013
Short description: | p2@LY6G6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LY6G6D_5end |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | -41bp_to_ENST00000375824, ENST00000375825, ENST00000479334, NM_021246, uc003nwf.1, uc003nwg.1_5end |
EntrezGene: | LY6G6D |
HGNC: | 13935 |
UniProt: | Q8NDY2O95868 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.05e-15 | 2 |
synovial cell | 1.20e-10 | 3 |
intestinal epithelial cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
surface | 9.99e-30 | 1 |
rectum | 2.74e-29 | 4 |
lower digestive tract | 1.14e-23 | 5 |
large intestine | 2.42e-11 | 11 |
stratified squamous epithelium | 1.20e-10 | 3 |
layer of synovial tissue | 1.20e-10 | 3 |
synovial joint | 1.20e-10 | 3 |
synovial membrane of synovial joint | 1.20e-10 | 3 |
zone of skin | 1.82e-08 | 4 |
intestinal mucosa | 2.26e-08 | 4 |
wall of intestine | 2.26e-08 | 4 |
gastrointestinal system mucosa | 2.26e-08 | 4 |
gastrointestinal system epithelium | 2.26e-08 | 4 |
intestinal epithelium | 2.26e-08 | 4 |
intestine | 2.68e-07 | 17 |
hindgut | 5.84e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 6.09e-19 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.