FFCP PHASE1:Mm9::chr1:46910728..46910761,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227059|HGNC=|MCL_coexpression_id=2|UniProt=Q6P5F6|association_with_transcript=129bp_to_ENSMUST00000027131_5end|description=CAGE_peak_3_at_Slc39a10_5end|id=chr1:46910728..46910761,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!5.23e-08!10;UBERON:0000411!5.23e-08!10;UBERON:0001950!5.23e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.50e-10,10;UBERON:0000411,2.50e-10,10;UBERON:0001950,2.50e-10,10;UBERON:0003080,7.50e-08,40;UBERON:0002780,1.74e-07,39;UBERON:0001890,1.74e-07,39;UBERON:0006240,1.74e-07,39;UBERON:0002619,2.97e-07,17;UBERON:0003102,6.77e-07,22|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,0.563154888606667,0.234064526321993,0.856089841127525,0.239316476986009,0.171200729931206,0.262261207256992,0.333109761815663,0.202475267389826,0,0.157731082679119,0.548457734422955,0.42438965179803,1.02051948181284,0.397163804803541,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,2.39203954153597,2.23029248682932,2.9367480345869,0,0.218025156380447,1.31811709640683,0.388859798148567,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0.573066879877513,0.515672092277442,2.02316460859598,2.11596391708813,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.898800331555214,0.384218305321555,0.414758449233911,0.135005938331691,0,0.285650984403804,0.662605622854841,0.244981598429908,0.287536413054709,0,0,0.638436690425939,1.53606533256243,2.2420668914133,1.64677758484337,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,1.28134512719193,1.3047961207771,0.454357159999104,0.68014404096107,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0.511290967734173,0.519572009205738,0,0.422530259330042,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0.517875767294343,1.48442139064825,1.38788261412909,2.13125834818499,3.22861696158482,3.46662073271032,2.58695155698551,1.13099932196708,0.247194967734374,1.73519228303894,1.76922110389975,0.970601099684455,0.220841518460394,1.45462575940567,0,0,0.41889341362691,0,0.838705871541442,0.599902730993408,0.508280908292259,1.49790639404823,0.915001205637253,0.251308704225729,11.9938780932671,12.2743419518559,1.87009240103604,3.73154905055843,0.712875546952214,1.49288364732112,0.505445516867349,0.210441855886474,0.650602214813519,0.689706313300419,1.0803727788321,0.452114453507145,1.2246569847239,0.768682321709099,1.21812241927647,0.776110112217047,2.37124792226126,0.945530400839096,2.11141348996739,0.657587197282725,1.94633074457919,2.43776516565517,1.85203922767149,2.58744546864041,0,0.772043721344145,0,1.24275463521301,0.703578179943289,1.08037236876609,1.65721314909647,0.983821158737019,0.771335564436891,1.16266972375204,0.268273401399619,0.583826711835847,0.822799249567402,0.656669856316381,0.810688095458557,1.31579988682799,0.658650345873152,1.07365135008297,1.26173969138476,1.85228302282712,0,0.528901133327089,0.853153002140936,0.928946687441754,1.03093969057675,1.00841762311671,0.22237804384487,0.760902504450237,0.474529061544512,0.329397909448022,0.502670417600539,0,0,0,0.432276099749388,0.199141273254367,0.948339504765408,0.799739588268102,0,1.83286195060783,1.74557238450863,0.701358198903186,1.45444035385792,0.885660887877613,0.470996183524124,0.740382983530803,0.889357881261447,0.166845105716094,0.393117990226406,1.34917267430912,0.405720242777006,0,0.763877555344259,0.863088412352432,0,0.274561413188081,1.43768206527355,1.11642284300551,0,0,0.538192240565737,0,0.739012760666419,1.13694847062291,0.977789858652155,1.01847051465113,1.87752198630802,1.34005005953453,2.14239276797412,0.780534591431195,1.89162172927429,0.8858587585951,2.23236676120482,0.983179888294428,1.03610989119537,1.44649058581512,1.50791283939272,0.54390568381871,0.983528546038072,1.93155722413313,0.642202359951168,0.937693492737625,0.655739781506702,1.76729649043061,0.94652465824877,0,0.215423397732799,0.477937595905104,0.891194696329576,0.283076530788832,0,1.16902343164525,0.395287777946524,0.963963949265421,1.13552068166615,0.890328018336276,0.651547837414304,0.824850614862677,0,0.971122544619926,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,0.775284879504663,0.727067458955011,1.06949213515416,0,1.05418608574999,1.03135543248187,0,1.62054984628179,1.55230420539305,2.14337035031592,3.3694644392032,2.85390108163313,2.30368628842969,0.608929898229199,1.40803024838226,0.847328283455281,1.10264199027481,4.122156323537,1.13025098687134,5.1869115438214,6.32673423216623,4.26766339337159,0.291480836629851,0.556275906031529,0,0.82554747185289,0.370389054739423,0.565105371014073,0,0.457556346413045,1.01987057996313,0.419854356970974,0.276399947608848,0,0.949007980743406,0.609958401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| ||
|EntrezGene=227059 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q6P5F6 | |||
|association_with_transcript=129bp_to_ENSMUST00000027131_5end | |||
|description=CAGE_peak_3_at_Slc39a10_5end | |||
|id=chr1:46910728..46910761,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!5.23e-08!10;UBERON:0000411!5.23e-08!10;UBERON:0001950!5.23e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.50e-10,10;UBERON:0000411,2.50e-10,10;UBERON:0001950,2.50e-10,10;UBERON:0003080,7.50e-08,40;UBERON:0002780,1.74e-07,39;UBERON:0001890,1.74e-07,39;UBERON:0006240,1.74e-07,39;UBERON:0002619,2.97e-07,17;UBERON:0003102,6.77e-07,22 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,0.563154888606667,0.234064526321993,0.856089841127525,0.239316476986009,0.171200729931206,0.262261207256992,0.333109761815663,0.202475267389826,0,0.157731082679119,0.548457734422955,0.42438965179803,1.02051948181284,0.397163804803541,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,2.39203954153597,2.23029248682932,2.9367480345869,0,0.218025156380447,1.31811709640683,0.388859798148567,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0.573066879877513,0.515672092277442,2.02316460859598,2.11596391708813,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.898800331555214,0.384218305321555,0.414758449233911,0.135005938331691,0,0.285650984403804,0.662605622854841,0.244981598429908,0.287536413054709,0,0,0.638436690425939,1.53606533256243,2.2420668914133,1.64677758484337,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,1.28134512719193,1.3047961207771,0.454357159999104,0.68014404096107,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0.511290967734173,0.519572009205738,0,0.422530259330042,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0.517875767294343,1.48442139064825,1.38788261412909,2.13125834818499,3.22861696158482,3.46662073271032,2.58695155698551,1.13099932196708,0.247194967734374,1.73519228303894,1.76922110389975,0.970601099684455,0.220841518460394,1.45462575940567,0,0,0.41889341362691,0,0.838705871541442,0.599902730993408,0.508280908292259,1.49790639404823,0.915001205637253,0.251308704225729,11.9938780932671,12.2743419518559,1.87009240103604,3.73154905055843,0.712875546952214,1.49288364732112,0.505445516867349,0.210441855886474,0.650602214813519,0.689706313300419,1.0803727788321,0.452114453507145,1.2246569847239,0.768682321709099,1.21812241927647,0.776110112217047,2.37124792226126,0.945530400839096,2.11141348996739,0.657587197282725,1.94633074457919,2.43776516565517,1.85203922767149,2.58744546864041,0,0.772043721344145,0,1.24275463521301,0.703578179943289,1.08037236876609,1.65721314909647,0.983821158737019,0.771335564436891,1.16266972375204,0.268273401399619,0.583826711835847,0.822799249567402,0.656669856316381,0.810688095458557,1.31579988682799,0.658650345873152,1.07365135008297,1.26173969138476,1.85228302282712,0,0.528901133327089,0.853153002140936,0.928946687441754,1.03093969057675,1.00841762311671,0.22237804384487,0.760902504450237,0.474529061544512,0.329397909448022,0.502670417600539,0,0,0,0.432276099749388,0.199141273254367,0.948339504765408,0.799739588268102,0,1.83286195060783,1.74557238450863,0.701358198903186,1.45444035385792,0.885660887877613,0.470996183524124,0.740382983530803,0.889357881261447,0.166845105716094,0.393117990226406,1.34917267430912,0.405720242777006,0,0.763877555344259,0.863088412352432,0,0.274561413188081,1.43768206527355,1.11642284300551,0,0,0.538192240565737,0,0.739012760666419,1.13694847062291,0.977789858652155,1.01847051465113,1.87752198630802,1.34005005953453,2.14239276797412,0.780534591431195,1.89162172927429,0.8858587585951,2.23236676120482,0.983179888294428,1.03610989119537,1.44649058581512,1.50791283939272,0.54390568381871,0.983528546038072,1.93155722413313,0.642202359951168,0.937693492737625,0.655739781506702,1.76729649043061,0.94652465824877,0,0.215423397732799,0.477937595905104,0.891194696329576,0.283076530788832,0,1.16902343164525,0.395287777946524,0.963963949265421,1.13552068166615,0.890328018336276,0.651547837414304,0.824850614862677,0,0.971122544619926,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,0.775284879504663,0.727067458955011,1.06949213515416,0,1.05418608574999,1.03135543248187,0,1.62054984628179,1.55230420539305,2.14337035031592,3.3694644392032,2.85390108163313,2.30368628842969,0.608929898229199,1.40803024838226,0.847328283455281,1.10264199027481,4.122156323537,1.13025098687134,5.1869115438214,6.32673423216623,4.26766339337159,0.291480836629851,0.556275906031529,0,0.82554747185289,0.370389054739423,0.565105371014073,0,0.457556346413045,1.01987057996313,0.419854356970974,0.276399947608848,0,0.949007980743406,0.609958401380546,0.86404272657441,1.04544148007234,1.09181281873089,1.34864346384821,0.578574190077352,1.30877970992015,0.259229946583586,0,0,5.08356256549528,3.47462829959905,2.33341426012857,1.93739735216597,2.36538575687089,0.704143431874524,0.651021924219751,0.734015410979976,0.724752362478018,0.864090018773596,0.316011120628178,1.41907650703115,1.43795340030758,0.649604114888975,0.716106782669926,1.19208812868759,0.120195449519969,0.590758108698309,0.302899349844443,0.457240839929999,0.302478555410522,0.682205165178267,0.288635524920988,0.350630706544707,2.49403421976732,0,0.807424709485281,0,1.35232715822533,1.12609485270709,1.83151624267265,1.71494703263253,1.00314420807073,3.95326289831947,5.52390283808612,8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| |||
|short_description=p3@Slc39a10 | |||
}} |
Revision as of 20:27, 13 September 2013
Short description: | p3@Slc39a10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc39a10_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 129bp_to_ENSMUST00000027131_5end |
EntrezGene: | Slc39a10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.50e-10 | 10 |
visual cortex | 2.50e-10 | 10 |
neocortex | 2.50e-10 | 10 |
anterior neural tube | 7.50e-08 | 40 |
regional part of forebrain | 1.74e-07 | 39 |
forebrain | 1.74e-07 | 39 |
future forebrain | 1.74e-07 | 39 |
regional part of cerebral cortex | 2.97e-07 | 17 |
surface structure | 6.77e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.