FFCP PHASE1:Mm9::chr2:120276624..120276653,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76051|HGNC=|MCL_coexpression_id=4|UniProt=|association_with_transcript=0bp_to_uc008lvw.1_5end|description=CAGE_peak_7_at_Ganc_5end|id=chr2:120276624..120276653,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!4.18e-15!24;UBERON:0001557!4.18e-15!24;UBERON:0001042!4.18e-15!24;UBERON:0008814!4.18e-15!24;UBERON:0009145!4.18e-15!24;UBERON:0002370!1.29e-13!23;UBERON:0000974!1.29e-13!23;UBERON:0004807!1.29e-13!23;UBERON:0005058!1.29e-13!23;UBERON:0003351!1.29e-13!23;UBERON:0009113!1.29e-13!23;UBERON:0003295!1.29e-13!23;UBERON:0009722!1.29e-13!23;UBERON:0005562!1.29e-13!23;UBERON:0007690!1.29e-13!23;UBERON:0000072!5.01e-13!27;UBERON:0003408!6.53e-13!24;UBERON:0004177!1.04e-11!29;UBERON:0000063!1.37e-10!35;UBERON:0002390!4.17e-10!45;UBERON:0003061!4.17e-10!45;UBERON:0002193!3.30e-09!48;UBERON:0000065!1.61e-08!41;UBERON:0001004!3.12e-08!42;UBERON:0000474!1.80e-07!9;UBERON:0003081!2.89e-07!88;UBERON:0002368!4.10e-07!60;UBERON:0005057!4.98e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.01e-15,23;UBERON:0000974,2.01e-15,23;UBERON:0004807,2.01e-15,23;UBERON:0005058,2.01e-15,23;UBERON:0003351,2.01e-15,23;UBERON:0009113,2.01e-15,23;UBERON:0003295,2.01e-15,23;UBERON:0009722,2.01e-15,23;UBERON:0005562,2.01e-15,23;UBERON:0007690,2.01e-15,23;UBERON:0006562,9.18e-15,24;UBERON:0003408,9.18e-15,24;UBERON:0001557,9.18e-15,24;UBERON:0001042,9.18e-15,24;UBERON:0008814,9.18e-15,24;UBERON:0009145,9.18e-15,24;UBERON:0000072,4.44e-13,27;UBERON:0002390,1.60e-12,45;UBERON:0003061,1.60e-12,45;UBERON:0004177,3.79e-12,29;UBERON:0005057,3.79e-12,29;UBERON:0002193,1.08e-11,48;UBERON:0002405,1.08e-11,48;UBERON:0000077,5.47e-10,35;UBERON:0007811,1.07e-09,36;UBERON:0000993,1.74e-08,1;UBERON:0000065,1.86e-08,41;UBERON:0001004,3.05e-08,42;UBERON:0000153,4.87e-08,43;UBERON:0003081,1.35e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88652807281682,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.15479086080775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.205421914329655,0.389762468933385,0.537080087002444,0,0.480781798079875,1.03382669022204,1.51449674922221,1.143102099825,2.41982844328417,4.58052039476836,4.52195655709548,7.71387554398355,0.453460767230423,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p7@Ganc}} | ||
|EntrezGene=76051 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008lvw.1_5end | |||
|description=CAGE_peak_7_at_Ganc_5end | |||
|id=chr2:120276624..120276653,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!4.18e-15!24;UBERON:0001557!4.18e-15!24;UBERON:0001042!4.18e-15!24;UBERON:0008814!4.18e-15!24;UBERON:0009145!4.18e-15!24;UBERON:0002370!1.29e-13!23;UBERON:0000974!1.29e-13!23;UBERON:0004807!1.29e-13!23;UBERON:0005058!1.29e-13!23;UBERON:0003351!1.29e-13!23;UBERON:0009113!1.29e-13!23;UBERON:0003295!1.29e-13!23;UBERON:0009722!1.29e-13!23;UBERON:0005562!1.29e-13!23;UBERON:0007690!1.29e-13!23;UBERON:0000072!5.01e-13!27;UBERON:0003408!6.53e-13!24;UBERON:0004177!1.04e-11!29;UBERON:0000063!1.37e-10!35;UBERON:0002390!4.17e-10!45;UBERON:0003061!4.17e-10!45;UBERON:0002193!3.30e-09!48;UBERON:0000065!1.61e-08!41;UBERON:0001004!3.12e-08!42;UBERON:0000474!1.80e-07!9;UBERON:0003081!2.89e-07!88;UBERON:0002368!4.10e-07!60;UBERON:0005057!4.98e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.01e-15,23;UBERON:0000974,2.01e-15,23;UBERON:0004807,2.01e-15,23;UBERON:0005058,2.01e-15,23;UBERON:0003351,2.01e-15,23;UBERON:0009113,2.01e-15,23;UBERON:0003295,2.01e-15,23;UBERON:0009722,2.01e-15,23;UBERON:0005562,2.01e-15,23;UBERON:0007690,2.01e-15,23;UBERON:0006562,9.18e-15,24;UBERON:0003408,9.18e-15,24;UBERON:0001557,9.18e-15,24;UBERON:0001042,9.18e-15,24;UBERON:0008814,9.18e-15,24;UBERON:0009145,9.18e-15,24;UBERON:0000072,4.44e-13,27;UBERON:0002390,1.60e-12,45;UBERON:0003061,1.60e-12,45;UBERON:0004177,3.79e-12,29;UBERON:0005057,3.79e-12,29;UBERON:0002193,1.08e-11,48;UBERON:0002405,1.08e-11,48;UBERON:0000077,5.47e-10,35;UBERON:0007811,1.07e-09,36;UBERON:0000993,1.74e-08,1;UBERON:0000065,1.86e-08,41;UBERON:0001004,3.05e-08,42;UBERON:0000153,4.87e-08,43;UBERON:0003081,1.35e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88652807281682,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.15479086080775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.205421914329655,0.389762468933385,0.537080087002444,0,0.480781798079875,1.03382669022204,1.51449674922221,1.143102099825,2.41982844328417,4.58052039476836,4.52195655709548,7.71387554398355,0.453460767230423,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p7@Ganc | |||
}} |
Revision as of 21:48, 13 September 2013
Short description: | p7@Ganc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ganc_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 0bp_to_uc008lvw.1_5end |
EntrezGene: | Ganc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.01e-15 | 23 |
neck | 2.01e-15 | 23 |
respiratory system epithelium | 2.01e-15 | 23 |
hemolymphoid system gland | 2.01e-15 | 23 |
pharyngeal epithelium | 2.01e-15 | 23 |
thymic region | 2.01e-15 | 23 |
pharyngeal gland | 2.01e-15 | 23 |
entire pharyngeal arch endoderm | 2.01e-15 | 23 |
thymus primordium | 2.01e-15 | 23 |
early pharyngeal endoderm | 2.01e-15 | 23 |
pharynx | 9.18e-15 | 24 |
gland of gut | 9.18e-15 | 24 |
upper respiratory tract | 9.18e-15 | 24 |
chordate pharynx | 9.18e-15 | 24 |
pharyngeal arch system | 9.18e-15 | 24 |
pharyngeal region of foregut | 9.18e-15 | 24 |
segment of respiratory tract | 4.44e-13 | 27 |
hematopoietic system | 1.60e-12 | 45 |
blood island | 1.60e-12 | 45 |
hemopoietic organ | 3.79e-12 | 29 |
immune organ | 3.79e-12 | 29 |
hemolymphoid system | 1.08e-11 | 48 |
immune system | 1.08e-11 | 48 |
mixed endoderm/mesoderm-derived structure | 5.47e-10 | 35 |
craniocervical region | 1.07e-09 | 36 |
oviduct | 1.74e-08 | 1 |
respiratory tract | 1.86e-08 | 41 |
respiratory system | 3.05e-08 | 42 |
anterior region of body | 4.87e-08 | 43 |
lateral plate mesoderm | 1.35e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.