FFCP PHASE1:Mm9::chr3:103672068..103672090,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=7|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:103672068..103672090,-|id=chr3:103672068..103672090,-|ontology_enrichment_celltype=CL:0000791!4.20e-41!9;CL:0000789!4.20e-41!9;CL:0002420!4.20e-41!9;CL:0002419!4.20e-41!9;CL:0000790!4.20e-41!9;CL:0000838!1.62e-37!12;CL:0000624!1.07e-36!8;CL:0000542!1.60e-34!13;CL:0000051!1.60e-34!13;CL:0002031!6.55e-34!25;CL:0000084!2.04e-33!11;CL:0000827!2.04e-33!11;CL:0000893!1.02e-27!6;CL:0002489!1.02e-27!6;CL:0000898!1.02e-27!6;CL:0000809!1.02e-27!6;CL:0000810!1.02e-27!6;CL:0000895!1.02e-27!6;CL:0000808!1.02e-27!6;CL:0000894!1.02e-27!6;CL:0000806!1.02e-27!6;CL:0000807!1.02e-27!6;CL:0000805!1.02e-27!6;CL:0002425!1.02e-27!6;CL:0002436!1.02e-27!6;CL:0002427!1.02e-27!6;CL:0002428!1.02e-27!6;CL:0002429!1.02e-27!6;CL:0002433!1.02e-27!6;CL:0002431!1.02e-27!6;CL:0002432!1.02e-27!6;CL:0000738!4.64e-26!17;CL:0002087!4.64e-26!17;CL:0000988!5.15e-26!32;CL:0002032!5.15e-26!32;CL:0000037!5.15e-26!32;CL:0000566!5.15e-26!32;CL:0000837!5.15e-26!32;CL:0002320!2.06e-17!46;CL:0000134!2.06e-17!46;CL:0000219!1.71e-14!54;CL:0000553!4.48e-12!6;CL:0000556!4.48e-12!6;CL:0000063!1.96e-11!66;CL:0000050!4.22e-08!9;CL:0000723!1.22e-07!91;CL:0000048!1.22e-07!91;CL:0000034!5.11e-07!97|ontology_enrichment_celltype_v019_2=CL:0000791,4.25e-78,9;CL:0000789,4.25e-78,9;CL:0002420,4.25e-78,9;CL:0002419,4.25e-78,9;CL:0000790,4.25e-78,9;CL:0000624,1.54e-69,8;CL:0000084,6.87e-64,11;CL:0000827,6.87e-64,11;CL:0000838,1.47e-58,12;CL:0000542,4.78e-54,13;CL:0000051,4.78e-54,13;CL:0000893,4.22e-52,6;CL:0002489,4.22e-52,6;CL:0000898,4.22e-52,6;CL:0000809,4.22e-52,6;CL:0000810,4.22e-52,6;CL:0000895,4.22e-52,6;CL:0000808,4.22e-52,6;CL:0000894,4.22e-52,6;CL:0000806,4.22e-52,6;CL:0000807,4.22e-52,6;CL:0000805,4.22e-52,6;CL:0002425,4.22e-52,6;CL:0002436,4.22e-52,6;CL:0002427,4.22e-52,6;CL:0002428,4.22e-52,6;CL:0002429,4.22e-52,6;CL:0002433,4.22e-52,6;CL:0002431,4.22e-52,6;CL:0002432,4.22e-52,6;CL:0000738,2.69e-41,17;CL:0002087,2.69e-41,17;CL:0002031,1.48e-34,25;CL:0000988,6.13e-27,32;CL:0002032,6.13e-27,32;CL:0000037,6.13e-27,32;CL:0000837,6.13e-27,32;CL:0002320,1.23e-18,46;CL:0000134,1.23e-18,46;CL:0000219,8.19e-16,54;CL:0000815,3.04e-10,1;CL:0000792,3.04e-10,1;CL:0000625,4.59e-10,1;CL:0000723,3.57e-09,91;CL:0000048,3.57e-09,91;CL:0000034,1.44e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.06e-17!46;UBERON:0002390!1.52e-12!45;UBERON:0003061!1.52e-12!45;UBERON:0002370!1.10e-11!23;UBERON:0000974!1.10e-11!23;UBERON:0004807!1.10e-11!23;UBERON:0005058!1.10e-11!23;UBERON:0003351!1.10e-11!23;UBERON:0009113!1.10e-11!23;UBERON:0003295!1.10e-11!23;UBERON:0009722!1.10e-11!23;UBERON:0005562!1.10e-11!23;UBERON:0007690!1.10e-11!23;UBERON:0002193!1.22e-11!48;UBERON:0006562!3.73e-11!24;UBERON:0003408!3.73e-11!24;UBERON:0001557!3.73e-11!24;UBERON:0001042!3.73e-11!24;UBERON:0008814!3.73e-11!24;UBERON:0009145!3.73e-11!24;UBERON:0000072!8.46e-10!27;UBERON:0000063!3.31e-09!35;UBERON:0004177!4.74e-09!29;UBERON:0000065!1.21e-07!41;UBERON:0001004!1.98e-07!42;UBERON:0002405!2.31e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.23e-18,46;UBERON:0002370,1.25e-13,23;UBERON:0000974,1.25e-13,23;UBERON:0004807,1.25e-13,23;UBERON:0005058,1.25e-13,23;UBERON:0003351,1.25e-13,23;UBERON:0009113,1.25e-13,23;UBERON:0003295,1.25e-13,23;UBERON:0009722,1.25e-13,23;UBERON:0005562,1.25e-13,23;UBERON:0007690,1.25e-13,23;UBERON:0006562,4.65e-13,24;UBERON:0003408,4.65e-13,24;UBERON:0001557,4.65e-13,24;UBERON:0001042,4.65e-13,24;UBERON:0008814,4.65e-13,24;UBERON:0009145,4.65e-13,24;UBERON:0000072,1.34e-11,27;UBERON:0004177,8.61e-11,29;UBERON:0005057,8.61e-11,29;UBERON:0002390,2.87e-09,45;UBERON:0003061,2.87e-09,45;UBERON:0000077,6.43e-09,35;UBERON:0002193,1.14e-08,48;UBERON:0002405,1.14e-08,48;UBERON:0007811,1.15e-08,36;UBERON:0000065,1.38e-07,41;UBERON:0001004,2.11e-07,42;UBERON:0000153,3.17e-07,43|phase1_expression=0,0,0,0,0,0,0,4.26106967357202,30.9735188733667,15.9163877898956,2.05461561870606,1.03703806693937,1.02720437958723,1.22388563386596,0.333109761815663,0,0,1.26184866143295,0.411343300817216,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,5.07753499407941,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:103672068..103672090,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:103672068..103672090,- | |||
|id=chr3:103672068..103672090,- | |||
|ontology_enrichment_celltype=CL:0000791!4.20e-41!9;CL:0000789!4.20e-41!9;CL:0002420!4.20e-41!9;CL:0002419!4.20e-41!9;CL:0000790!4.20e-41!9;CL:0000838!1.62e-37!12;CL:0000624!1.07e-36!8;CL:0000542!1.60e-34!13;CL:0000051!1.60e-34!13;CL:0002031!6.55e-34!25;CL:0000084!2.04e-33!11;CL:0000827!2.04e-33!11;CL:0000893!1.02e-27!6;CL:0002489!1.02e-27!6;CL:0000898!1.02e-27!6;CL:0000809!1.02e-27!6;CL:0000810!1.02e-27!6;CL:0000895!1.02e-27!6;CL:0000808!1.02e-27!6;CL:0000894!1.02e-27!6;CL:0000806!1.02e-27!6;CL:0000807!1.02e-27!6;CL:0000805!1.02e-27!6;CL:0002425!1.02e-27!6;CL:0002436!1.02e-27!6;CL:0002427!1.02e-27!6;CL:0002428!1.02e-27!6;CL:0002429!1.02e-27!6;CL:0002433!1.02e-27!6;CL:0002431!1.02e-27!6;CL:0002432!1.02e-27!6;CL:0000738!4.64e-26!17;CL:0002087!4.64e-26!17;CL:0000988!5.15e-26!32;CL:0002032!5.15e-26!32;CL:0000037!5.15e-26!32;CL:0000566!5.15e-26!32;CL:0000837!5.15e-26!32;CL:0002320!2.06e-17!46;CL:0000134!2.06e-17!46;CL:0000219!1.71e-14!54;CL:0000553!4.48e-12!6;CL:0000556!4.48e-12!6;CL:0000063!1.96e-11!66;CL:0000050!4.22e-08!9;CL:0000723!1.22e-07!91;CL:0000048!1.22e-07!91;CL:0000034!5.11e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.25e-78,9;CL:0000789,4.25e-78,9;CL:0002420,4.25e-78,9;CL:0002419,4.25e-78,9;CL:0000790,4.25e-78,9;CL:0000624,1.54e-69,8;CL:0000084,6.87e-64,11;CL:0000827,6.87e-64,11;CL:0000838,1.47e-58,12;CL:0000542,4.78e-54,13;CL:0000051,4.78e-54,13;CL:0000893,4.22e-52,6;CL:0002489,4.22e-52,6;CL:0000898,4.22e-52,6;CL:0000809,4.22e-52,6;CL:0000810,4.22e-52,6;CL:0000895,4.22e-52,6;CL:0000808,4.22e-52,6;CL:0000894,4.22e-52,6;CL:0000806,4.22e-52,6;CL:0000807,4.22e-52,6;CL:0000805,4.22e-52,6;CL:0002425,4.22e-52,6;CL:0002436,4.22e-52,6;CL:0002427,4.22e-52,6;CL:0002428,4.22e-52,6;CL:0002429,4.22e-52,6;CL:0002433,4.22e-52,6;CL:0002431,4.22e-52,6;CL:0002432,4.22e-52,6;CL:0000738,2.69e-41,17;CL:0002087,2.69e-41,17;CL:0002031,1.48e-34,25;CL:0000988,6.13e-27,32;CL:0002032,6.13e-27,32;CL:0000037,6.13e-27,32;CL:0000837,6.13e-27,32;CL:0002320,1.23e-18,46;CL:0000134,1.23e-18,46;CL:0000219,8.19e-16,54;CL:0000815,3.04e-10,1;CL:0000792,3.04e-10,1;CL:0000625,4.59e-10,1;CL:0000723,3.57e-09,91;CL:0000048,3.57e-09,91;CL:0000034,1.44e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.06e-17!46;UBERON:0002390!1.52e-12!45;UBERON:0003061!1.52e-12!45;UBERON:0002370!1.10e-11!23;UBERON:0000974!1.10e-11!23;UBERON:0004807!1.10e-11!23;UBERON:0005058!1.10e-11!23;UBERON:0003351!1.10e-11!23;UBERON:0009113!1.10e-11!23;UBERON:0003295!1.10e-11!23;UBERON:0009722!1.10e-11!23;UBERON:0005562!1.10e-11!23;UBERON:0007690!1.10e-11!23;UBERON:0002193!1.22e-11!48;UBERON:0006562!3.73e-11!24;UBERON:0003408!3.73e-11!24;UBERON:0001557!3.73e-11!24;UBERON:0001042!3.73e-11!24;UBERON:0008814!3.73e-11!24;UBERON:0009145!3.73e-11!24;UBERON:0000072!8.46e-10!27;UBERON:0000063!3.31e-09!35;UBERON:0004177!4.74e-09!29;UBERON:0000065!1.21e-07!41;UBERON:0001004!1.98e-07!42;UBERON:0002405!2.31e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.23e-18,46;UBERON:0002370,1.25e-13,23;UBERON:0000974,1.25e-13,23;UBERON:0004807,1.25e-13,23;UBERON:0005058,1.25e-13,23;UBERON:0003351,1.25e-13,23;UBERON:0009113,1.25e-13,23;UBERON:0003295,1.25e-13,23;UBERON:0009722,1.25e-13,23;UBERON:0005562,1.25e-13,23;UBERON:0007690,1.25e-13,23;UBERON:0006562,4.65e-13,24;UBERON:0003408,4.65e-13,24;UBERON:0001557,4.65e-13,24;UBERON:0001042,4.65e-13,24;UBERON:0008814,4.65e-13,24;UBERON:0009145,4.65e-13,24;UBERON:0000072,1.34e-11,27;UBERON:0004177,8.61e-11,29;UBERON:0005057,8.61e-11,29;UBERON:0002390,2.87e-09,45;UBERON:0003061,2.87e-09,45;UBERON:0000077,6.43e-09,35;UBERON:0002193,1.14e-08,48;UBERON:0002405,1.14e-08,48;UBERON:0007811,1.15e-08,36;UBERON:0000065,1.38e-07,41;UBERON:0001004,2.11e-07,42;UBERON:0000153,3.17e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,4.26106967357202,30.9735188733667,15.9163877898956,2.05461561870606,1.03703806693937,1.02720437958723,1.22388563386596,0.333109761815663,0,0,1.26184866143295,0.411343300817216,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,5.07753499407941,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:103672068..103672090,- | |||
}} | |||
Revision as of 01:05, 14 September 2013
| Short description: | p@chr3:103672068..103672090, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr3:103672068..103672090, - |
| Coexpression cluster: | MCL_coexpression_mm9:7 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 1.23e-18 | 46 |
| thymus | 1.25e-13 | 23 |
| neck | 1.25e-13 | 23 |
| respiratory system epithelium | 1.25e-13 | 23 |
| hemolymphoid system gland | 1.25e-13 | 23 |
| pharyngeal epithelium | 1.25e-13 | 23 |
| thymic region | 1.25e-13 | 23 |
| pharyngeal gland | 1.25e-13 | 23 |
| entire pharyngeal arch endoderm | 1.25e-13 | 23 |
| thymus primordium | 1.25e-13 | 23 |
| early pharyngeal endoderm | 1.25e-13 | 23 |
| pharynx | 4.65e-13 | 24 |
| gland of gut | 4.65e-13 | 24 |
| upper respiratory tract | 4.65e-13 | 24 |
| chordate pharynx | 4.65e-13 | 24 |
| pharyngeal arch system | 4.65e-13 | 24 |
| pharyngeal region of foregut | 4.65e-13 | 24 |
| segment of respiratory tract | 1.34e-11 | 27 |
| hemopoietic organ | 8.61e-11 | 29 |
| immune organ | 8.61e-11 | 29 |
| hematopoietic system | 2.87e-09 | 45 |
| blood island | 2.87e-09 | 45 |
| mixed endoderm/mesoderm-derived structure | 6.43e-09 | 35 |
| hemolymphoid system | 1.14e-08 | 48 |
| immune system | 1.14e-08 | 48 |
| craniocervical region | 1.15e-08 | 36 |
| respiratory tract | 1.38e-07 | 41 |
| respiratory system | 2.11e-07 | 42 |
| anterior region of body | 3.17e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
