FFCP PHASE1:Mm9::chr3:121152665..121152682,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=55|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:121152665..121152682,+|id=chr3:121152665..121152682,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,2.06e-08,3;CL:0000737,2.06e-08,3;CL:0000746,2.06e-08,3;CL:0000513,2.06e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!2.18e-12!7;UBERON:0006858!2.18e-12!7;UBERON:0003134!5.44e-09!8;UBERON:0003064!1.19e-08!14;UBERON:0003975!2.62e-08!5;UBERON:0002342!3.54e-08!10;UBERON:0005062!3.54e-08!10;UBERON:0000474!7.76e-08!9;UBERON:0005795!3.00e-07!4;UBERON:0000995!3.00e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.08e-42,7;UBERON:0006858,9.08e-42,7;UBERON:0003064,1.17e-20,14;UBERON:0005631,2.04e-18,3;UBERON:0000478,2.04e-18,3;UBERON:0000158,2.04e-18,3;UBERON:0005795,9.45e-14,4;UBERON:0000995,9.45e-14,4;UBERON:0001987,9.57e-13,2;UBERON:0003124,9.57e-13,2;UBERON:0004340,9.57e-13,2;UBERON:0005256,5.22e-12,45;UBERON:0003975,4.06e-11,5;UBERON:0003104,1.55e-08,61;UBERON:0009142,1.55e-08,61;UBERON:0000926,4.43e-08,120;UBERON:0004120,4.43e-08,120;UBERON:0006603,4.43e-08,120;UBERON:0000305,2.43e-07,1;UBERON:0003134,3.84e-07,8;UBERON:0006834,4.83e-07,1;UBERON:0005172,4.97e-07,49;UBERON:0005173,4.97e-07,49;UBERON:0002417,4.97e-07,49;UBERON:0000916,4.97e-07,49|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54355661621568,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,25.8289321972795,2.4287945747259,23.1393763517227,19.1410862722529,36.4748790137347,27.0454026412121,1.25666591329675,6.92145909656247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,3.83077383174383,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571242563048644,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.651547837414304,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,5.39744928546534,2.1183207086382,0,0,0.322928853391811,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.579568782096571,1.87682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0,0|short_description=p@chr3:121152665..121152682,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=55 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:121152665..121152682,+ | |||
|id=chr3:121152665..121152682,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.06e-08,3;CL:0000737,2.06e-08,3;CL:0000746,2.06e-08,3;CL:0000513,2.06e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!2.18e-12!7;UBERON:0006858!2.18e-12!7;UBERON:0003134!5.44e-09!8;UBERON:0003064!1.19e-08!14;UBERON:0003975!2.62e-08!5;UBERON:0002342!3.54e-08!10;UBERON:0005062!3.54e-08!10;UBERON:0000474!7.76e-08!9;UBERON:0005795!3.00e-07!4;UBERON:0000995!3.00e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.08e-42,7;UBERON:0006858,9.08e-42,7;UBERON:0003064,1.17e-20,14;UBERON:0005631,2.04e-18,3;UBERON:0000478,2.04e-18,3;UBERON:0000158,2.04e-18,3;UBERON:0005795,9.45e-14,4;UBERON:0000995,9.45e-14,4;UBERON:0001987,9.57e-13,2;UBERON:0003124,9.57e-13,2;UBERON:0004340,9.57e-13,2;UBERON:0005256,5.22e-12,45;UBERON:0003975,4.06e-11,5;UBERON:0003104,1.55e-08,61;UBERON:0009142,1.55e-08,61;UBERON:0000926,4.43e-08,120;UBERON:0004120,4.43e-08,120;UBERON:0006603,4.43e-08,120;UBERON:0000305,2.43e-07,1;UBERON:0003134,3.84e-07,8;UBERON:0006834,4.83e-07,1;UBERON:0005172,4.97e-07,49;UBERON:0005173,4.97e-07,49;UBERON:0002417,4.97e-07,49;UBERON:0000916,4.97e-07,49 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54355661621568,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,25.8289321972795,2.4287945747259,23.1393763517227,19.1410862722529,36.4748790137347,27.0454026412121,1.25666591329675,6.92145909656247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,3.83077383174383,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571242563048644,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.651547837414304,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,5.39744928546534,2.1183207086382,0,0,0.322928853391811,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.579568782096571,1.87682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr3:121152665..121152682,+ | |||
}} |
Revision as of 01:22, 14 September 2013
Short description: | p@chr3:121152665..121152682, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:121152665..121152682, + |
Coexpression cluster: | MCL_coexpression_mm9:55 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.06e-08 | 3 |
striated muscle cell | 2.06e-08 | 3 |
cardiac muscle cell | 2.06e-08 | 3 |
cardiac muscle myoblast | 2.06e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 9.08e-42 | 7 |
adrenal/interrenal gland | 9.08e-42 | 7 |
intermediate mesoderm | 1.17e-20 | 14 |
extraembryonic membrane | 2.04e-18 | 3 |
extraembryonic structure | 2.04e-18 | 3 |
membranous layer | 2.04e-18 | 3 |
embryonic uterus | 9.45e-14 | 4 |
uterus | 9.45e-14 | 4 |
placenta | 9.57e-13 | 2 |
chorion | 9.57e-13 | 2 |
allantois | 9.57e-13 | 2 |
trunk mesenchyme | 5.22e-12 | 45 |
internal female genitalia | 4.06e-11 | 5 |
mesenchyme | 1.55e-08 | 61 |
entire embryonic mesenchyme | 1.55e-08 | 61 |
mesoderm | 4.43e-08 | 120 |
mesoderm-derived structure | 4.43e-08 | 120 |
presumptive mesoderm | 4.43e-08 | 120 |
amnion | 2.43e-07 | 1 |
female reproductive organ | 3.84e-07 | 8 |
uterus or analog | 4.83e-07 | 1 |
abdomen element | 4.97e-07 | 49 |
abdominal segment element | 4.97e-07 | 49 |
abdominal segment of trunk | 4.97e-07 | 49 |
abdomen | 4.97e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.