FFCP PHASE1:Mm9::chr3:121426474..121426479,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14066|HGNC=|UniProt=P20352,Q8R3Q1|association_with_transcript=19bp_to_ENSMUST00000029771,NM_010171,uc008ree.2_5end|description=CAGE_peak_3_at_F3_5end|id=chr3:121426474..121426479,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,7.10e-08,3;CL:0002202,7.10e-08,3;CL:0000069,7.10e-08,3;CL:0002632,7.10e-08,3;CL:0002368,7.10e-08,3;CL:0000307,7.10e-08,3;CL:0000377,7.10e-08,3;CL:0000192,5.93e-07,3;CL:0000359,5.93e-07,3;CL:0002539,5.93e-07,3;CL:0000514,5.93e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.64e-07!17;UBERON:0005181!2.64e-07!17;UBERON:0002224!2.64e-07!17;UBERON:0000915!2.64e-07!17;UBERON:0008947!2.64e-07!17;UBERON:0003258!2.64e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005178,6.49e-16,17;UBERON:0005181,6.49e-16,17;UBERON:0002224,6.49e-16,17;UBERON:0000915,6.49e-16,17;UBERON:0008947,6.49e-16,17;UBERON:0003258,6.49e-16,17;UBERON:0002048,1.48e-10,14;UBERON:0000117,1.48e-10,14;UBERON:0000171,1.48e-10,14;UBERON:0000170,1.48e-10,14;UBERON:0005597,1.48e-10,14;UBERON:0000118,1.48e-10,14;UBERON:0000947,5.61e-09,4;UBERON:0001637,5.61e-09,4;UBERON:0004573,5.61e-09,4;UBERON:0003509,5.61e-09,4;UBERON:0004571,5.61e-09,4;UBERON:0010191,5.61e-09,4;UBERON:0004572,5.61e-09,4;UBERON:0005153,2.26e-08,17;UBERON:0005157,2.43e-08,20;UBERON:0003126,7.10e-08,3;UBERON:0001005,7.10e-08,3;UBERON:0007196,7.10e-08,3;UBERON:0001558,7.10e-08,3;UBERON:0000065,3.32e-07,41;UBERON:0000055,3.70e-07,5;UBERON:0007500,3.70e-07,5;UBERON:0001981,3.70e-07,5;UBERON:0002049,3.70e-07,5;UBERON:0007798,3.70e-07,5;UBERON:0004537,3.70e-07,5;UBERON:0006965,3.70e-07,5;UBERON:0003975,4.60e-07,5;UBERON:0001004,5.88e-07,42;UBERON:0001135,5.93e-07,3;UBERON:0004237,5.93e-07,3;UBERON:0004695,5.93e-07,3;UBERON:0002111,5.93e-07,3;UBERON:0004178,5.93e-07,3|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0,0,0.563154888606667,0.70219357896598,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,3.14742044938943,2.43304634926835,1.83546752161682,0.782391344348039,0.65407546914134,0.659058548203415,0.972149495371417,1.53985063787899,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,0,0,0,0,0.889294796111139,0,0,0,0.898800331555214,1.92109152660777,0.103689612308478,0.135005938331691,0,1.42825492201902,1.10434270475807,0.367472397644862,0.0958454710182364,0,0,1.0214987046815,0.921639199537461,0.395658863190582,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.589257170947335,0.427115042397309,0,0.302904773332736,0.377857800533928,0.579728977403356,0,2.03991400112325,0,0,0,0.561777680527007,2.89731548382698,2.59786004602869,2.47337702157238,0.281686839553361,2.56652954828636,0,7.11066703153331,4.11332977921307,5.57391704045217,4.04419556011827,0.45673551887624,0,0.29688427812965,0,0,0,0.150722640552623,0.352766121407114,0.502666365318702,1.73036477414062,3.18118585223806,0,0.161766849947409,0,0,0,0.585561594023094,0,0.255457055208591,0,0,0,0.449371918214468,0.457500602818626,0.376963056338593,0.347648640384553,0.767146371990992,1.24672826735736,0.486723789203273,0.611036183101898,0.248813941220186,0.505445516867349,2.52530227063769,0.260240885925407,0.229902104433473,0,0.452114453507145,0.408218994907967,0.384341160854549,0.281105173679186,1.55222022443409,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.823128545631774,0.59710280045548,0,0.257347907114715,0,0,0,0,0,0.393528463494808,0.308534225774757,0,0.536546802799238,0.233530684734339,0.16455984991348,0.32833492815819,1.21603214318784,0.584799949701329,0,0.805238512562231,0.841159794256509,0.205809224758569,0,0.793351699990633,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0.814605311381257,0.581857461502877,0.0701358198903186,0.632365371242573,0.738050739898011,0.156998727841375,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0.505157755894224,0.179397413521912,0,2.77129785249907,0,0,0.509235257325564,0.704070744865506,1.00503754465089,2.85652369063216,5.65887578787617,3.15270288212382,1.99318220683897,2.71073106717728,0.983179888294428,1.55416483679306,1.44649058581512,0,0,0,0.551873492609465,0.642202359951168,0.468846746368813,1.96721934452011,1.26235463602186,0.631016438832513,1.17131623288992,0.430846795465598,0.238968797952552,0.668396022247182,0.566153061577665,0.809621403349789,0.876767573733936,0.790575555893047,0.642642632843614,0.709700426041343,0.534196811001766,0.651547837414304,2.14461159864296,0,0.971122544619926,0.302323556964751,0.754420319023592,0.885905678642318,0.614870295887855,0.775284879504663,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0.340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| ||
|EntrezGene=14066 | |||
|HGNC= | |||
|UniProt=P20352,Q8R3Q1 | |||
|association_with_transcript=19bp_to_ENSMUST00000029771,NM_010171,uc008ree.2_5end | |||
|description=CAGE_peak_3_at_F3_5end | |||
|id=chr3:121426474..121426479,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.10e-08,3;CL:0002202,7.10e-08,3;CL:0000069,7.10e-08,3;CL:0002632,7.10e-08,3;CL:0002368,7.10e-08,3;CL:0000307,7.10e-08,3;CL:0000377,7.10e-08,3;CL:0000192,5.93e-07,3;CL:0000359,5.93e-07,3;CL:0002539,5.93e-07,3;CL:0000514,5.93e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.64e-07!17;UBERON:0005181!2.64e-07!17;UBERON:0002224!2.64e-07!17;UBERON:0000915!2.64e-07!17;UBERON:0008947!2.64e-07!17;UBERON:0003258!2.64e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,6.49e-16,17;UBERON:0005181,6.49e-16,17;UBERON:0002224,6.49e-16,17;UBERON:0000915,6.49e-16,17;UBERON:0008947,6.49e-16,17;UBERON:0003258,6.49e-16,17;UBERON:0002048,1.48e-10,14;UBERON:0000117,1.48e-10,14;UBERON:0000171,1.48e-10,14;UBERON:0000170,1.48e-10,14;UBERON:0005597,1.48e-10,14;UBERON:0000118,1.48e-10,14;UBERON:0000947,5.61e-09,4;UBERON:0001637,5.61e-09,4;UBERON:0004573,5.61e-09,4;UBERON:0003509,5.61e-09,4;UBERON:0004571,5.61e-09,4;UBERON:0010191,5.61e-09,4;UBERON:0004572,5.61e-09,4;UBERON:0005153,2.26e-08,17;UBERON:0005157,2.43e-08,20;UBERON:0003126,7.10e-08,3;UBERON:0001005,7.10e-08,3;UBERON:0007196,7.10e-08,3;UBERON:0001558,7.10e-08,3;UBERON:0000065,3.32e-07,41;UBERON:0000055,3.70e-07,5;UBERON:0007500,3.70e-07,5;UBERON:0001981,3.70e-07,5;UBERON:0002049,3.70e-07,5;UBERON:0007798,3.70e-07,5;UBERON:0004537,3.70e-07,5;UBERON:0006965,3.70e-07,5;UBERON:0003975,4.60e-07,5;UBERON:0001004,5.88e-07,42;UBERON:0001135,5.93e-07,3;UBERON:0004237,5.93e-07,3;UBERON:0004695,5.93e-07,3;UBERON:0002111,5.93e-07,3;UBERON:0004178,5.93e-07,3 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0,0,0.563154888606667,0.70219357896598,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,3.14742044938943,2.43304634926835,1.83546752161682,0.782391344348039,0.65407546914134,0.659058548203415,0.972149495371417,1.53985063787899,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,0,0,0,0,0.889294796111139,0,0,0,0.898800331555214,1.92109152660777,0.103689612308478,0.135005938331691,0,1.42825492201902,1.10434270475807,0.367472397644862,0.0958454710182364,0,0,1.0214987046815,0.921639199537461,0.395658863190582,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.589257170947335,0.427115042397309,0,0.302904773332736,0.377857800533928,0.579728977403356,0,2.03991400112325,0,0,0,0.561777680527007,2.89731548382698,2.59786004602869,2.47337702157238,0.281686839553361,2.56652954828636,0,7.11066703153331,4.11332977921307,5.57391704045217,4.04419556011827,0.45673551887624,0,0.29688427812965,0,0,0,0.150722640552623,0.352766121407114,0.502666365318702,1.73036477414062,3.18118585223806,0,0.161766849947409,0,0,0,0.585561594023094,0,0.255457055208591,0,0,0,0.449371918214468,0.457500602818626,0.376963056338593,0.347648640384553,0.767146371990992,1.24672826735736,0.486723789203273,0.611036183101898,0.248813941220186,0.505445516867349,2.52530227063769,0.260240885925407,0.229902104433473,0,0.452114453507145,0.408218994907967,0.384341160854549,0.281105173679186,1.55222022443409,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.823128545631774,0.59710280045548,0,0.257347907114715,0,0,0,0,0,0.393528463494808,0.308534225774757,0,0.536546802799238,0.233530684734339,0.16455984991348,0.32833492815819,1.21603214318784,0.584799949701329,0,0.805238512562231,0.841159794256509,0.205809224758569,0,0.793351699990633,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0.814605311381257,0.581857461502877,0.0701358198903186,0.632365371242573,0.738050739898011,0.156998727841375,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0.505157755894224,0.179397413521912,0,2.77129785249907,0,0,0.509235257325564,0.704070744865506,1.00503754465089,2.85652369063216,5.65887578787617,3.15270288212382,1.99318220683897,2.71073106717728,0.983179888294428,1.55416483679306,1.44649058581512,0,0,0,0.551873492609465,0.642202359951168,0.468846746368813,1.96721934452011,1.26235463602186,0.631016438832513,1.17131623288992,0.430846795465598,0.238968797952552,0.668396022247182,0.566153061577665,0.809621403349789,0.876767573733936,0.790575555893047,0.642642632843614,0.709700426041343,0.534196811001766,0.651547837414304,2.14461159864296,0,0.971122544619926,0.302323556964751,0.754420319023592,0.885905678642318,0.614870295887855,0.775284879504663,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0.214337035031592,0,0.891844088010353,0.493647061806363,0,0.23467170806371,1.48282449604674,0.220528398054962,0.49465875882444,0.968786560175433,0.844380948994182,0.716234064018819,0.820704498725306,0.582961673259701,0.556275906031529,0,0,0.185194527369712,0,0,0,0.509935289981566,0.419854356970974,0.552799895217695,0,0.158167996790568,0,0.540026704109006,0.836353184057875,0.87345025498471,1.21377911746339,0.661227645802687,0,0.648074866458964,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0.5208175393758,0.629156066554265,0.483168241652012,0.576060012515731,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.192423683280659,0,0.453460767230423,0,0,0.335769232728157,2.31827512838629,2.62755465631655,3.29672923681077,2.57242054894879,0.501572104035363,0,0,1.14579102687879,0,0,0,0.675022500231806,0,0.906284817968409,0,0,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.384150914429216,0.287177344778066,0,0.231768651889711,0.77163688185482,0,0.294397840268795,1.71434626192708,0.177475806159338,0.476872379894642,0.436039249896986,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.197008964751127,0.818462086339379,0.309873682371932,0.578719832943424,0.499621155875892,0.701794825336225,0.859484216193193,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p3@F3 | |||
}} |
Revision as of 01:22, 14 September 2013
Short description: | p3@F3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_F3_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENSMUST00000029771, NM_010171, uc008ree.2_5end |
EntrezGene: | F3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.10e-08 | 3 |
epithelial cell of tracheobronchial tree | 7.10e-08 | 3 |
branched duct epithelial cell | 7.10e-08 | 3 |
epithelial cell of lower respiratory tract | 7.10e-08 | 3 |
respiratory epithelial cell | 7.10e-08 | 3 |
tracheal epithelial cell | 7.10e-08 | 3 |
tracheoblast | 7.10e-08 | 3 |
smooth muscle cell | 5.93e-07 | 3 |
vascular associated smooth muscle cell | 5.93e-07 | 3 |
aortic smooth muscle cell | 5.93e-07 | 3 |
smooth muscle myoblast | 5.93e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.