FFCP PHASE1:Hg19::chr8:101170257..101170296,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6674|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11212|TSSclassifier=S|UniProt=Q07617,B3KQ58|association_with_transcript=0bp_to_ENST00000251809,NM_172218,uc003yjg.1,uc003yjh.1_5end|description=CAGE_peak_2_at_SPAG1_5end|id=chr8:101170257..101170296,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,4.72e-07,253|ontology_enrichment_development_v019=UBERON:0008947;7.77e-14;29!UBERON:0001041;1.35e-10;30!UBERON:0003918;3.84e-07;10!UBERON:0007687;3.84e-07;10|ontology_enrichment_disease=DOID:305!7.47e-23!106;DOID:0050687!4.70e-17!143;DOID:162!7.84e-11!235;DOID:14566!2.71e-10!239|ontology_enrichment_disease_v019=DOID:305;3.51e-07;106|ontology_enrichment_disease_v019_2=DOID:305,4.11e-24,106;DOID:0050687,8.00e-17,143;DOID:162,4.90e-13,235;DOID:14566,5.00e-12,239|ontology_enrichment_uberon=UBERON:0005743!6.53e-12!86;UBERON:0001049!1.22e-11!57;UBERON:0005068!1.22e-11!57;UBERON:0006241!1.22e-11!57;UBERON:0007135!1.22e-11!57;UBERON:0001017!1.95e-11!82;UBERON:0000073!3.61e-11!94;UBERON:0001016!3.61e-11!94;UBERON:0007023!1.22e-10!115;UBERON:0003080!2.78e-09!42;UBERON:0000955!3.23e-09!69;UBERON:0006238!3.23e-09!69;UBERON:0002780!3.46e-09!41;UBERON:0001890!3.46e-09!41;UBERON:0006240!3.46e-09!41;UBERON:0002346!8.62e-09!90;UBERON:0003075!9.08e-09!86;UBERON:0007284!9.08e-09!86;UBERON:0002616!1.03e-08!59;UBERON:0002020!2.87e-07!34;UBERON:0003528!2.87e-07!34;UBERON:0001893!5.38e-07!34;UBERON:0002791!6.13e-07!33;UBERON:0003056!6.45e-07!61;UBERON:0005177!7.65e-07!107;UBERON:0000062!8.84e-07!511|ontology_enrichment_uberon_v019=UBERON:0002780;6.87e-07;41!UBERON:0001890;6.87e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.67e-13,223;UBERON:0001049,3.99e-11,56;UBERON:0005068,3.99e-11,56;UBERON:0006241,3.99e-11,56;UBERON:0007135,3.99e-11,56;UBERON:0000073,7.35e-10,53;UBERON:0002616,7.35e-10,53;UBERON:0001017,9.42e-10,81;UBERON:0005177,2.89e-09,101;UBERON:0001041,6.67e-09,87;UBERON:0001016,1.10e-08,89;UBERON:0002780,1.52e-08,41;UBERON:0001890,1.52e-08,41;UBERON:0003080,1.52e-08,41;UBERON:0006240,1.52e-08,41;UBERON:0007023,1.94e-08,114;UBERON:0008947,2.76e-08,38;UBERON:0003258,2.76e-08,38;UBERON:0003075,1.19e-07,82;UBERON:0007284,1.19e-07,82;UBERON:0000955,1.32e-07,68;UBERON:0006238,1.32e-07,68;UBERON:0004921,1.90e-07,118;UBERON:0005172,2.40e-07,54;UBERON:0005173,2.40e-07,54;UBERON:0002346,4.02e-07,86;UBERON:0000489,5.95e-07,31;UBERON:0003056,6.19e-07,61|phase1_expression=0,0.856402095563933,0.986680828671798,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,2.86235987131057,2.87436292653057,4.6450776650077,9.70450252998981,8.37426012389447,9.36658297632783,1.96682138424452,1.15148819429164,1.70297735647684,0,0,0,0.0774672005803016,0,0,2.21598163412751,2.80762226458198,5.20826089718044,0.447830948479849,0,0,0.726991193897824,0.377875943688809,0.727752183563449,0.929716147622738,0.411167888021826,2.16794459626573,0.575384784644301,0.256160706529101,0.236482229888585,1.37898272294647,3.22742341791913,2.70852973188684,0.752969358170419,0,0.224723484445085,1.22433556948361,1.92557416245656,0.639337125799041,0.659702600373432,1.39624560335142,0.426224750532694,3.48251086354301,3.40431134814684,4.9825779919646,0.75374599577023,0,0.868755378820466,4.84319602106695,3.31449872388808,5.06339819905415,0.211255286311942,0.637812899895131,1.04829322754188,0.22465726229299,0.750884464207532,0.64290234678832,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0.426730222566507,1.60158394814405,0.574752439954483,0,0,5.69212969109448,3.52342313622563,3.44045905312706,3.96513985737078,3.92355994087075,0.263384084775077,0.393419540227666,1.17903228824749,0.616804496998528,0,0,0,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0.25618263945135,0.780356085359269,0,0.552700035571697,0,0.14828656316206,0,0,0.339928028092699,0,0,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0,0,2.41928091869679,2.40696176205157,1.44824403882799,0,0,0,0.722878304769133,0,0.289693037921647,0,0,1.51255707462509,1.33037638477538,1.31752178539689,2.35762335895883,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.79504962946682,0,0.347140501607594,0,0.838998872419812,0.825354125820202,0.417989933073621,0.516833518338658,0.71153252537342,1.00416183829401,0.805658634218294,0.760272105718513,0.732186172644509,0.367663080345869,0,2.05389375053383,2.02076435363553,2.59006405111641,0,0,0,0,15.511210565933,0,0,0.759783069987479,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0.408308342509787,0.491337269247072,0.103325781175765,0,0,0,0,1.0100166837244,0.125118519871964,0.831192346452549,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0.37223371266318,0.5063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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11212 | |||
|TSSclassifier=S | |||
|UniProt=Q07617,B3KQ58 | |||
|association_with_transcript=0bp_to_ENST00000251809,NM_172218,uc003yjg.1,uc003yjh.1_5end | |||
|description=CAGE_peak_2_at_SPAG1_5end | |||
|id=chr8:101170257..101170296,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.72e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.77e-14;29!UBERON:0001041;1.35e-10;30!UBERON:0003918;3.84e-07;10!UBERON:0007687;3.84e-07;10 | |||
|ontology_enrichment_disease=DOID:305!7.47e-23!106;DOID:0050687!4.70e-17!143;DOID:162!7.84e-11!235;DOID:14566!2.71e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:305;3.51e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.11e-24,106;DOID:0050687,8.00e-17,143;DOID:162,4.90e-13,235;DOID:14566,5.00e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0005743!6.53e-12!86;UBERON:0001049!1.22e-11!57;UBERON:0005068!1.22e-11!57;UBERON:0006241!1.22e-11!57;UBERON:0007135!1.22e-11!57;UBERON:0001017!1.95e-11!82;UBERON:0000073!3.61e-11!94;UBERON:0001016!3.61e-11!94;UBERON:0007023!1.22e-10!115;UBERON:0003080!2.78e-09!42;UBERON:0000955!3.23e-09!69;UBERON:0006238!3.23e-09!69;UBERON:0002780!3.46e-09!41;UBERON:0001890!3.46e-09!41;UBERON:0006240!3.46e-09!41;UBERON:0002346!8.62e-09!90;UBERON:0003075!9.08e-09!86;UBERON:0007284!9.08e-09!86;UBERON:0002616!1.03e-08!59;UBERON:0002020!2.87e-07!34;UBERON:0003528!2.87e-07!34;UBERON:0001893!5.38e-07!34;UBERON:0002791!6.13e-07!33;UBERON:0003056!6.45e-07!61;UBERON:0005177!7.65e-07!107;UBERON:0000062!8.84e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.87e-07;41!UBERON:0001890;6.87e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.67e-13,223;UBERON:0001049,3.99e-11,56;UBERON:0005068,3.99e-11,56;UBERON:0006241,3.99e-11,56;UBERON:0007135,3.99e-11,56;UBERON:0000073,7.35e-10,53;UBERON:0002616,7.35e-10,53;UBERON:0001017,9.42e-10,81;UBERON:0005177,2.89e-09,101;UBERON:0001041,6.67e-09,87;UBERON:0001016,1.10e-08,89;UBERON:0002780,1.52e-08,41;UBERON:0001890,1.52e-08,41;UBERON:0003080,1.52e-08,41;UBERON:0006240,1.52e-08,41;UBERON:0007023,1.94e-08,114;UBERON:0008947,2.76e-08,38;UBERON:0003258,2.76e-08,38;UBERON:0003075,1.19e-07,82;UBERON:0007284,1.19e-07,82;UBERON:0000955,1.32e-07,68;UBERON:0006238,1.32e-07,68;UBERON:0004921,1.90e-07,118;UBERON:0005172,2.40e-07,54;UBERON:0005173,2.40e-07,54;UBERON:0002346,4.02e-07,86;UBERON:0000489,5.95e-07,31;UBERON:0003056,6.19e-07,61 | |||
|phase1_expression=0,0.856402095563933,0.986680828671798,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,2.86235987131057,2.87436292653057,4.6450776650077,9.70450252998981,8.37426012389447,9.36658297632783,1.96682138424452,1.15148819429164,1.70297735647684,0,0,0,0.0774672005803016,0,0,2.21598163412751,2.80762226458198,5.20826089718044,0.447830948479849,0,0,0.726991193897824,0.377875943688809,0.727752183563449,0.929716147622738,0.411167888021826,2.16794459626573,0.575384784644301,0.256160706529101,0.236482229888585,1.37898272294647,3.22742341791913,2.70852973188684,0.752969358170419,0,0.224723484445085,1.22433556948361,1.92557416245656,0.639337125799041,0.659702600373432,1.39624560335142,0.426224750532694,3.48251086354301,3.40431134814684,4.9825779919646,0.75374599577023,0,0.868755378820466,4.84319602106695,3.31449872388808,5.06339819905415,0.211255286311942,0.637812899895131,1.04829322754188,0.22465726229299,0.750884464207532,0.64290234678832,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0.426730222566507,1.60158394814405,0.574752439954483,0,0,5.69212969109448,3.52342313622563,3.44045905312706,3.96513985737078,3.92355994087075,0.263384084775077,0.393419540227666,1.17903228824749,0.616804496998528,0,0,0,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0.25618263945135,0.780356085359269,0,0.552700035571697,0,0.14828656316206,0,0,0.339928028092699,0,0,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0,0,2.41928091869679,2.40696176205157,1.44824403882799,0,0,0,0.722878304769133,0,0.289693037921647,0,0,1.51255707462509,1.33037638477538,1.31752178539689,2.35762335895883,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.79504962946682,0,0.347140501607594,0,0.838998872419812,0.825354125820202,0.417989933073621,0.516833518338658,0.71153252537342,1.00416183829401,0.805658634218294,0.760272105718513,0.732186172644509,0.367663080345869,0,2.05389375053383,2.02076435363553,2.59006405111641,0,0,0,0,15.511210565933,0,0,0.759783069987479,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0.408308342509787,0.491337269247072,0.103325781175765,0,0,0,0,1.0100166837244,0.125118519871964,0.831192346452549,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0.37223371266318,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.847802961552438,0.193260853163297,0.545492241181669,0.573609190778008,0.121973706129595,0.265059536642971,0.116193942869518,0.725627385107593,0.756962552626885,1.09493207722749,0,0,0,0,0,5.08719240171329,4.88895601226495,4.82022059766964,4.85293480022533,4.57546832594053,4.50814176311084,4.98875840192608,4.31687223275761,2.69323009862473,0,0,0,0,6.33775174109154,5.89696330006576,5.90789906681404,0.441463099414651,0.860919069801795,1.71567810298526,0,0,0.301586917234893,0,0.325808305310325,0,0,1.15930404975077,0.352226082707465,2.16549671641611,1.85194205030644,2.66355813128438,0.790204397959275,2.57545848628462,0.246217006087397,0,0.445893486866185,0,0.671928512795438,1.27597587518148,0.716468181622786,1.45316969256981,0,10.3459279958148,0.880484340132261,1.65862492432618,2.59415916150531,1.76739406796932,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.599837947092342,0,0,0,0.239624855491583,2.29723871668228,1.42636905040718,0.144781306667579,0.205476322550383,0.358121926479791,1.79336230389644,3.54655368363469,4.09692392233083,4.87703537863044,2.7950408664471,5.20559415430487,1.54657762555539,0.502548796003046,2.55175500661265,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0.630809660135739,0.585707074963566,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,3.01999881146064,0.853820462427555,0,0,0,0,0.767309866440312,0,0,0,0,0,0.925258162815933,0,0.410635780069046,0,0.232420756919918,0.483437798366489,0,0.276242966807689,0.229628896329213,0.182091168006717,0,1.80479845162965,2.38747545023686,2.35304930753057,2.92278449306521,1.26661954671451,1.13733384070897,0,1.72732732881711,0,0.270946437543853,0.501689773854853,3.05851527654046,0,0.671624264166535,0,0,2.82095137628028,0.984043937099117,1.30151357865721,1.95777922130672,0.457847324091717,0.495056999523528,0,0,0,0.096670718292122,0.308097234229289,0,0.689182862422653,0.107420244868274,0.290033387828457,0.170453254832202,0.267096106940212,0.165284915360978,0,0.765676274967505,0.4046311234222,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0.7311404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| |||
|short_description=p2@SPAG1 | |||
}} |
Revision as of 02:49, 14 September 2013
Short description: | p2@SPAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SPAG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000251809, NM_172218, uc003yjg.1, uc003yjh.1_5end |
EntrezGene: | SPAG1 |
HGNC: | 11212 |
UniProt: | Q07617B3KQ58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.72e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.67e-13 | 223 |
neural tube | 3.99e-11 | 56 |
neural rod | 3.99e-11 | 56 |
future spinal cord | 3.99e-11 | 56 |
neural keel | 3.99e-11 | 56 |
regional part of nervous system | 7.35e-10 | 53 |
regional part of brain | 7.35e-10 | 53 |
central nervous system | 9.42e-10 | 81 |
trunk region element | 2.89e-09 | 101 |
foregut | 6.67e-09 | 87 |
nervous system | 1.10e-08 | 89 |
regional part of forebrain | 1.52e-08 | 41 |
forebrain | 1.52e-08 | 41 |
anterior neural tube | 1.52e-08 | 41 |
future forebrain | 1.52e-08 | 41 |
adult organism | 1.94e-08 | 114 |
respiratory primordium | 2.76e-08 | 38 |
endoderm of foregut | 2.76e-08 | 38 |
neural plate | 1.19e-07 | 82 |
presumptive neural plate | 1.19e-07 | 82 |
brain | 1.32e-07 | 68 |
future brain | 1.32e-07 | 68 |
subdivision of digestive tract | 1.90e-07 | 118 |
abdomen element | 2.40e-07 | 54 |
abdominal segment element | 2.40e-07 | 54 |
neurectoderm | 4.02e-07 | 86 |
cavitated compound organ | 5.95e-07 | 31 |
pre-chordal neural plate | 6.19e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.11e-24 | 106 |
cell type cancer | 8.00e-17 | 143 |
cancer | 4.90e-13 | 235 |
disease of cellular proliferation | 5.00e-12 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.