FFCP PHASE1:Mm9::chr4:129252589..129252596,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=118|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:129252589..129252596,-|id=chr4:129252589..129252596,-|ontology_enrichment_celltype=CL:0000791!3.52e-19!9;CL:0000789!3.52e-19!9;CL:0002420!3.52e-19!9;CL:0002419!3.52e-19!9;CL:0000790!3.52e-19!9;CL:0000838!2.18e-18!12;CL:0000542!7.10e-17!13;CL:0000051!7.10e-17!13;CL:0000624!4.87e-16!8;CL:0000084!1.62e-15!11;CL:0000827!1.62e-15!11;CL:0000893!3.34e-15!6;CL:0002489!3.34e-15!6;CL:0000898!3.34e-15!6;CL:0000809!3.34e-15!6;CL:0000810!3.34e-15!6;CL:0000895!3.34e-15!6;CL:0000808!3.34e-15!6;CL:0000894!3.34e-15!6;CL:0000806!3.34e-15!6;CL:0000807!3.34e-15!6;CL:0000805!3.34e-15!6;CL:0002425!3.34e-15!6;CL:0002436!3.34e-15!6;CL:0002427!3.34e-15!6;CL:0002428!3.34e-15!6;CL:0002429!3.34e-15!6;CL:0002433!3.34e-15!6;CL:0002431!3.34e-15!6;CL:0002432!3.34e-15!6;CL:0000738!1.33e-12!17;CL:0002087!1.33e-12!17;CL:0002031!1.45e-12!25;CL:0000988!2.21e-11!32;CL:0002032!2.21e-11!32;CL:0000037!2.21e-11!32;CL:0000566!2.21e-11!32;CL:0000837!2.21e-11!32;CL:0002320!2.75e-07!46;CL:0000134!2.75e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000624,1.94e-35,8;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000625,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.88e-26!23;UBERON:0000974!3.88e-26!23;UBERON:0004807!3.88e-26!23;UBERON:0005058!3.88e-26!23;UBERON:0003351!3.88e-26!23;UBERON:0009113!3.88e-26!23;UBERON:0003295!3.88e-26!23;UBERON:0009722!3.88e-26!23;UBERON:0005562!3.88e-26!23;UBERON:0007690!3.88e-26!23;UBERON:0006562!6.20e-25!24;UBERON:0003408!6.20e-25!24;UBERON:0001557!6.20e-25!24;UBERON:0001042!6.20e-25!24;UBERON:0008814!6.20e-25!24;UBERON:0009145!6.20e-25!24;UBERON:0000072!7.40e-22!27;UBERON:0004177!3.69e-20!29;UBERON:0002193!5.08e-17!48;UBERON:0000063!3.14e-16!35;UBERON:0002390!4.92e-16!45;UBERON:0003061!4.92e-16!45;UBERON:0000065!1.89e-13!41;UBERON:0001004!4.61e-13!42;UBERON:0002405!4.66e-12!70;UBERON:0005057!6.58e-12!51;UBERON:0003929!7.95e-11!55;UBERON:0002530!4.35e-10!65;UBERON:0002368!1.12e-09!60;UBERON:0000490!1.58e-08!66;UBERON:0005911!4.97e-08!69;UBERON:0003081!9.66e-08!88;UBERON:0000949!1.42e-07!72;UBERON:0002384!2.75e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0002384,4.29e-10,46;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,1.54867594366833,1.17032263160997,0.34243593645101,0,1.54080656938085,2.09808965805594,0,0.202475267389826,0,0.315462165358238,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.673482891482306,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:129252589..129252596,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:129252589..129252596,- | |||
|id=chr4:129252589..129252596,- | |||
|ontology_enrichment_celltype=CL:0000791!3.52e-19!9;CL:0000789!3.52e-19!9;CL:0002420!3.52e-19!9;CL:0002419!3.52e-19!9;CL:0000790!3.52e-19!9;CL:0000838!2.18e-18!12;CL:0000542!7.10e-17!13;CL:0000051!7.10e-17!13;CL:0000624!4.87e-16!8;CL:0000084!1.62e-15!11;CL:0000827!1.62e-15!11;CL:0000893!3.34e-15!6;CL:0002489!3.34e-15!6;CL:0000898!3.34e-15!6;CL:0000809!3.34e-15!6;CL:0000810!3.34e-15!6;CL:0000895!3.34e-15!6;CL:0000808!3.34e-15!6;CL:0000894!3.34e-15!6;CL:0000806!3.34e-15!6;CL:0000807!3.34e-15!6;CL:0000805!3.34e-15!6;CL:0002425!3.34e-15!6;CL:0002436!3.34e-15!6;CL:0002427!3.34e-15!6;CL:0002428!3.34e-15!6;CL:0002429!3.34e-15!6;CL:0002433!3.34e-15!6;CL:0002431!3.34e-15!6;CL:0002432!3.34e-15!6;CL:0000738!1.33e-12!17;CL:0002087!1.33e-12!17;CL:0002031!1.45e-12!25;CL:0000988!2.21e-11!32;CL:0002032!2.21e-11!32;CL:0000037!2.21e-11!32;CL:0000566!2.21e-11!32;CL:0000837!2.21e-11!32;CL:0002320!2.75e-07!46;CL:0000134!2.75e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000624,1.94e-35,8;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000625,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.88e-26!23;UBERON:0000974!3.88e-26!23;UBERON:0004807!3.88e-26!23;UBERON:0005058!3.88e-26!23;UBERON:0003351!3.88e-26!23;UBERON:0009113!3.88e-26!23;UBERON:0003295!3.88e-26!23;UBERON:0009722!3.88e-26!23;UBERON:0005562!3.88e-26!23;UBERON:0007690!3.88e-26!23;UBERON:0006562!6.20e-25!24;UBERON:0003408!6.20e-25!24;UBERON:0001557!6.20e-25!24;UBERON:0001042!6.20e-25!24;UBERON:0008814!6.20e-25!24;UBERON:0009145!6.20e-25!24;UBERON:0000072!7.40e-22!27;UBERON:0004177!3.69e-20!29;UBERON:0002193!5.08e-17!48;UBERON:0000063!3.14e-16!35;UBERON:0002390!4.92e-16!45;UBERON:0003061!4.92e-16!45;UBERON:0000065!1.89e-13!41;UBERON:0001004!4.61e-13!42;UBERON:0002405!4.66e-12!70;UBERON:0005057!6.58e-12!51;UBERON:0003929!7.95e-11!55;UBERON:0002530!4.35e-10!65;UBERON:0002368!1.12e-09!60;UBERON:0000490!1.58e-08!66;UBERON:0005911!4.97e-08!69;UBERON:0003081!9.66e-08!88;UBERON:0000949!1.42e-07!72;UBERON:0002384!2.75e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0002384,4.29e-10,46;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,1.54867594366833,1.17032263160997,0.34243593645101,0,1.54080656938085,2.09808965805594,0,0.202475267389826,0,0.315462165358238,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.673482891482306,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:129252589..129252596,- | |||
}} |
Revision as of 03:52, 14 September 2013
Short description: | p@chr4:129252589..129252596, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:129252589..129252596, - |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.48e-13 | 23 |
neck | 7.48e-13 | 23 |
respiratory system epithelium | 7.48e-13 | 23 |
hemolymphoid system gland | 7.48e-13 | 23 |
pharyngeal epithelium | 7.48e-13 | 23 |
thymic region | 7.48e-13 | 23 |
pharyngeal gland | 7.48e-13 | 23 |
entire pharyngeal arch endoderm | 7.48e-13 | 23 |
thymus primordium | 7.48e-13 | 23 |
early pharyngeal endoderm | 7.48e-13 | 23 |
pharynx | 2.40e-12 | 24 |
gland of gut | 2.40e-12 | 24 |
upper respiratory tract | 2.40e-12 | 24 |
chordate pharynx | 2.40e-12 | 24 |
pharyngeal arch system | 2.40e-12 | 24 |
pharyngeal region of foregut | 2.40e-12 | 24 |
segment of respiratory tract | 4.75e-11 | 27 |
hemopoietic organ | 2.47e-10 | 29 |
immune organ | 2.47e-10 | 29 |
connective tissue | 4.29e-10 | 46 |
mixed endoderm/mesoderm-derived structure | 1.14e-08 | 35 |
craniocervical region | 1.91e-08 | 36 |
respiratory tract | 1.74e-07 | 41 |
respiratory system | 2.54e-07 | 42 |
anterior region of body | 3.65e-07 | 43 |
hematopoietic system | 7.19e-07 | 45 |
blood island | 7.19e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.