FFCP PHASE1:Hg19::chr8:145086442..145086455,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=375686|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30510|TSSclassifier=S|UniProt=Q76KD6,B4DWW9|association_with_transcript=-126bp_to_ENST00000377470,NM_001134374,NM_198572,uc011lkw.1,uc011lkx.1_5end|coexpression_cluster_id=C817|description=CAGE_peak_2_at_SPATC1_5end|id=chr8:145086442..145086455,+|ontology_enrichment_celltype=CL:0002057!3.01e-72!42;CL:0000860!1.49e-66!45;CL:0000766!2.06e-66!76;CL:0002194!7.54e-64!63;CL:0000576!7.54e-64!63;CL:0000040!7.54e-64!63;CL:0000559!7.54e-64!63;CL:0002009!1.87e-61!65;CL:0000557!2.83e-60!71;CL:0000839!1.66e-58!70;CL:0000763!2.72e-56!112;CL:0000049!2.72e-56!112;CL:0000738!5.92e-48!140;CL:0000988!7.54e-45!182;CL:0000037!3.33e-43!172;CL:0000566!3.33e-43!172;CL:0002087!2.56e-41!119;CL:0002032!4.74e-41!165;CL:0000837!4.74e-41!165;CL:0002031!1.56e-35!124;CL:0000080!3.99e-13!6;CL:0000134!1.21e-11!358;CL:0002320!4.44e-11!365;CL:0002393!8.28e-11!9;CL:0002397!8.28e-11!9;CL:0000990!2.53e-10!8;CL:0000219!4.09e-09!390;CL:0000451!3.15e-08!10;CL:0000767!5.85e-07!3;CL:0000048!7.81e-07!430;CL:0000081!9.88e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.99e-69;33!CL:0002057;1.99e-69;33!CL:0000473;6.38e-48;39!CL:0000234;6.38e-48;39!CL:0000576;3.98e-47;48!CL:0000766;1.71e-31;69!CL:0000763;1.01e-15;100!CL:0002087;3.26e-13;104!CL:0002393;3.90e-13;6!CL:0002397;3.90e-13;6!CL:0000738;4.83e-11;136!CL:0000988;8.49e-10;177!CL:0000453;5.39e-09;5!CL:0000081;3.50e-07;11|ontology_enrichment_celltype_v019_2=CL:0000860,1.11e-81,42;CL:0002057,1.11e-81,42;CL:0000473,1.11e-70,48;CL:0000234,1.11e-70,48;CL:0002194,2.11e-59,59;CL:0000576,2.11e-59,59;CL:0000040,2.11e-59,59;CL:0000559,2.11e-59,59;CL:0000766,3.78e-59,72;CL:0002009,2.82e-57,61;CL:0000557,1.77e-55,67;CL:0000839,1.62e-52,66;CL:0000763,1.15e-51,108;CL:0000049,1.15e-51,108;CL:0000738,1.67e-39,136;CL:0000988,3.36e-39,177;CL:0000037,1.06e-34,168;CL:0002032,2.14e-34,161;CL:0000837,2.14e-34,161;CL:0002087,4.44e-32,115;CL:0002031,2.73e-28,120;CL:0000134,2.10e-12,354;CL:0002320,5.20e-12,361;CL:0000219,1.27e-10,386;CL:0000034,3.86e-09,441;CL:0000453,5.79e-09,5;CL:0000048,6.37e-09,427;CL:0002393,9.79e-09,9;CL:0002397,9.79e-09,9;CL:0000723,1.09e-08,433;CL:0000081,2.92e-07,11|ontology_enrichment_development_v019=CL:0002057;2.69e-58;42!CL:0000049;8.36e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.01e-60!102;UBERON:0003061!3.01e-60!102;UBERON:0002193!2.43e-55!112;UBERON:0002371!7.54e-52!80;UBERON:0001474!3.30e-47!86;UBERON:0002405!5.37e-43!115;UBERON:0004765!5.10e-38!101;UBERON:0001434!5.10e-38!101;UBERON:0003081!3.08e-22!216;UBERON:0002204!2.26e-17!167;UBERON:0002384!2.58e-10!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.25e-48,76;UBERON:0002390,4.87e-48,98;UBERON:0003061,4.87e-48,98;UBERON:0001474,3.02e-44,82;UBERON:0002193,5.72e-43,108;UBERON:0004765,9.06e-40,90;UBERON:0002405,2.75e-38,93;UBERON:0001434,3.61e-35,100;UBERON:0003081,1.45e-19,203;UBERON:0002204,1.77e-18,167;UBERON:0002384,1.79e-11,371;UBERON:0000926,4.83e-10,315;UBERON:0004120,4.83e-10,315;UBERON:0006603,4.83e-10,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,1.96682138424452,0.383829398097213,0.77408061658038,0,0,0,0,0,0,3.32397245119126,4.41197784434312,3.03815219002193,0.223915474239924,0.32389366601898,1.03030227053675,0.290796477559129,0.377875943688809,0.242584061187816,1.39457422143411,1.6446715520873,1.23882548358041,1.1507695692886,2.30544635876191,3.78371567821736,1.03423704220986,3.22742341791913,2.70852973188684,1.69418105588344,1.09162460023138,1.57306439111559,3.06083892370903,1.28371610830437,1.91801137739712,0.329851300186716,0.598390972864896,2.13112375266347,6.67481248845743,10.2129340444405,6.85104473895132,1.00499466102697,1.5644487552606,0.65156653411535,3.02699751316684,3.68277635987565,4.74693581161327,0.211255286311942,1.27562579979026,0.628975936525128,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=375686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30510 | |||
|TSSclassifier=S | |||
|UniProt=Q76KD6,B4DWW9 | |||
|association_with_transcript=-126bp_to_ENST00000377470,NM_001134374,NM_198572,uc011lkw.1,uc011lkx.1_5end | |||
|coexpression_cluster_id=C817 | |||
|description=CAGE_peak_2_at_SPATC1_5end | |||
|id=chr8:145086442..145086455,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.01e-72!42;CL:0000860!1.49e-66!45;CL:0000766!2.06e-66!76;CL:0002194!7.54e-64!63;CL:0000576!7.54e-64!63;CL:0000040!7.54e-64!63;CL:0000559!7.54e-64!63;CL:0002009!1.87e-61!65;CL:0000557!2.83e-60!71;CL:0000839!1.66e-58!70;CL:0000763!2.72e-56!112;CL:0000049!2.72e-56!112;CL:0000738!5.92e-48!140;CL:0000988!7.54e-45!182;CL:0000037!3.33e-43!172;CL:0000566!3.33e-43!172;CL:0002087!2.56e-41!119;CL:0002032!4.74e-41!165;CL:0000837!4.74e-41!165;CL:0002031!1.56e-35!124;CL:0000080!3.99e-13!6;CL:0000134!1.21e-11!358;CL:0002320!4.44e-11!365;CL:0002393!8.28e-11!9;CL:0002397!8.28e-11!9;CL:0000990!2.53e-10!8;CL:0000219!4.09e-09!390;CL:0000451!3.15e-08!10;CL:0000767!5.85e-07!3;CL:0000048!7.81e-07!430;CL:0000081!9.88e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.99e-69;33!CL:0002057;1.99e-69;33!CL:0000473;6.38e-48;39!CL:0000234;6.38e-48;39!CL:0000576;3.98e-47;48!CL:0000766;1.71e-31;69!CL:0000763;1.01e-15;100!CL:0002087;3.26e-13;104!CL:0002393;3.90e-13;6!CL:0002397;3.90e-13;6!CL:0000738;4.83e-11;136!CL:0000988;8.49e-10;177!CL:0000453;5.39e-09;5!CL:0000081;3.50e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.11e-81,42;CL:0002057,1.11e-81,42;CL:0000473,1.11e-70,48;CL:0000234,1.11e-70,48;CL:0002194,2.11e-59,59;CL:0000576,2.11e-59,59;CL:0000040,2.11e-59,59;CL:0000559,2.11e-59,59;CL:0000766,3.78e-59,72;CL:0002009,2.82e-57,61;CL:0000557,1.77e-55,67;CL:0000839,1.62e-52,66;CL:0000763,1.15e-51,108;CL:0000049,1.15e-51,108;CL:0000738,1.67e-39,136;CL:0000988,3.36e-39,177;CL:0000037,1.06e-34,168;CL:0002032,2.14e-34,161;CL:0000837,2.14e-34,161;CL:0002087,4.44e-32,115;CL:0002031,2.73e-28,120;CL:0000134,2.10e-12,354;CL:0002320,5.20e-12,361;CL:0000219,1.27e-10,386;CL:0000034,3.86e-09,441;CL:0000453,5.79e-09,5;CL:0000048,6.37e-09,427;CL:0002393,9.79e-09,9;CL:0002397,9.79e-09,9;CL:0000723,1.09e-08,433;CL:0000081,2.92e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.69e-58;42!CL:0000049;8.36e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.01e-60!102;UBERON:0003061!3.01e-60!102;UBERON:0002193!2.43e-55!112;UBERON:0002371!7.54e-52!80;UBERON:0001474!3.30e-47!86;UBERON:0002405!5.37e-43!115;UBERON:0004765!5.10e-38!101;UBERON:0001434!5.10e-38!101;UBERON:0003081!3.08e-22!216;UBERON:0002204!2.26e-17!167;UBERON:0002384!2.58e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.25e-48,76;UBERON:0002390,4.87e-48,98;UBERON:0003061,4.87e-48,98;UBERON:0001474,3.02e-44,82;UBERON:0002193,5.72e-43,108;UBERON:0004765,9.06e-40,90;UBERON:0002405,2.75e-38,93;UBERON:0001434,3.61e-35,100;UBERON:0003081,1.45e-19,203;UBERON:0002204,1.77e-18,167;UBERON:0002384,1.79e-11,371;UBERON:0000926,4.83e-10,315;UBERON:0004120,4.83e-10,315;UBERON:0006603,4.83e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,1.96682138424452,0.383829398097213,0.77408061658038,0,0,0,0,0,0,3.32397245119126,4.41197784434312,3.03815219002193,0.223915474239924,0.32389366601898,1.03030227053675,0.290796477559129,0.377875943688809,0.242584061187816,1.39457422143411,1.6446715520873,1.23882548358041,1.1507695692886,2.30544635876191,3.78371567821736,1.03423704220986,3.22742341791913,2.70852973188684,1.69418105588344,1.09162460023138,1.57306439111559,3.06083892370903,1.28371610830437,1.91801137739712,0.329851300186716,0.598390972864896,2.13112375266347,6.67481248845743,10.2129340444405,6.85104473895132,1.00499466102697,1.5644487552606,0.65156653411535,3.02699751316684,3.68277635987565,4.74693581161327,0.211255286311942,1.27562579979026,0.628975936525128,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59845090630601,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,15.715619820073,13.5920332841153,9.92008520301826,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,1.8402114799552,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16916185303633,2.39156712564054,2.28991551958182,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.281951753939561,0.45120521581504,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@SPATC1 | |||
}} |
Revision as of 04:11, 14 September 2013
Short description: | p2@SPATC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SPATC1_5end |
Coexpression cluster: | C817_cord_CD14_mycosis_xeroderma_migratory_B_hairy |
Association with transcript: | -126bp_to_ENST00000377470, NM_001134374, NM_198572, uc011lkw.1, uc011lkx.1_5end |
EntrezGene: | SPATC1 |
HGNC: | 30510 |
UniProt: | Q76KD6B4DWW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.25e-48 | 76 |
hematopoietic system | 4.87e-48 | 98 |
blood island | 4.87e-48 | 98 |
bone element | 3.02e-44 | 82 |
hemolymphoid system | 5.72e-43 | 108 |
skeletal element | 9.06e-40 | 90 |
immune system | 2.75e-38 | 93 |
skeletal system | 3.61e-35 | 100 |
lateral plate mesoderm | 1.45e-19 | 203 |
musculoskeletal system | 1.77e-18 | 167 |
connective tissue | 1.79e-11 | 371 |
mesoderm | 4.83e-10 | 315 |
mesoderm-derived structure | 4.83e-10 | 315 |
presumptive mesoderm | 4.83e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.