FFCP PHASE1:Hg19::chr8:41435696..41435734,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=137964 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20880 | |||
|TSSclassifier=S | |||
|UniProt=Q86UL3,E5RIA1,Q2TU73 | |||
|association_with_transcript=0bp_to_ENST00000396987,ENST00000519853,ENST00000520258,NM_178819,uc003xnz.2_5end | |||
|description=CAGE_peak_1_at_AGPAT6_5end | |||
|id=chr8:41435696..41435734,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.86e-26!140;CL:0000766!1.27e-20!76;CL:0000988!2.42e-20!182;CL:0002087!1.05e-18!119;CL:0000219!2.52e-18!390;CL:0002031!2.62e-18!124;CL:0000037!3.87e-18!172;CL:0000566!3.87e-18!172;CL:0000048!4.86e-18!430;CL:0002320!9.27e-18!365;CL:0000134!1.07e-17!358;CL:0002057!3.57e-17!42;CL:0000557!5.23e-17!71;CL:0002032!6.39e-17!165;CL:0000837!6.39e-17!165;CL:0002009!1.09e-16!65;CL:0000723!1.31e-16!436;CL:0002194!6.69e-16!63;CL:0000576!6.69e-16!63;CL:0000040!6.69e-16!63;CL:0000559!6.69e-16!63;CL:0000034!1.94e-15!444;CL:0000860!2.52e-15!45;CL:0000839!9.31e-15!70;CL:0000763!1.48e-13!112;CL:0000049!1.48e-13!112;CL:0002371!2.93e-10!591;CL:0000144!6.40e-08!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.10e-17;33!CL:0002057;8.10e-17;33!CL:0000473;9.25e-15;39!CL:0000234;9.25e-15;39!CL:0000576;8.26e-11;48!CL:0000766;1.12e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.09e-28,136;CL:0000766,7.43e-23,72;CL:0000988,3.08e-21,177;CL:0002087,3.44e-20,115;CL:0002031,9.96e-20,120;CL:0000037,2.89e-19,168;CL:0000557,4.88e-19,67;CL:0002009,7.89e-19,61;CL:0000219,1.62e-18,386;CL:0000473,4.98e-18,48;CL:0000234,4.98e-18,48;CL:0002032,5.02e-18,161;CL:0000837,5.02e-18,161;CL:0002194,5.15e-18,59;CL:0000576,5.15e-18,59;CL:0000040,5.15e-18,59;CL:0000559,5.15e-18,59;CL:0002320,5.76e-18,361;CL:0000134,6.58e-18,354;CL:0000048,6.90e-18,427;CL:0000860,3.57e-17,42;CL:0002057,3.57e-17,42;CL:0000839,1.34e-16,66;CL:0000723,1.84e-16,433;CL:0000034,2.72e-15,441;CL:0000763,8.73e-15,108;CL:0000049,8.73e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.07e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.40e-17!375;UBERON:0002371!1.87e-17!80;UBERON:0002390!1.67e-16!102;UBERON:0003061!1.67e-16!102;UBERON:0001474!7.44e-16!86;UBERON:0002193!1.09e-15!112;UBERON:0002405!3.48e-15!115;UBERON:0003081!6.60e-14!216;UBERON:0004765!7.82e-13!101;UBERON:0001434!7.82e-13!101;UBERON:0002204!4.45e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@AGPAT6 | |||
}} |
Revision as of 05:18, 14 September 2013
Short description: | p1@AGPAT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AGPAT6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396987, ENST00000519853, ENST00000520258, NM_178819, uc003xnz.2_5end |
EntrezGene: | AGPAT6 |
HGNC: | 20880 |
UniProt: | Q86UL3E5RIA1Q2TU73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.09e-28 | 136 |
myeloid leukocyte | 7.43e-23 | 72 |
hematopoietic cell | 3.08e-21 | 177 |
nongranular leukocyte | 3.44e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 9.96e-20 | 120 |
hematopoietic stem cell | 2.89e-19 | 168 |
granulocyte monocyte progenitor cell | 4.88e-19 | 67 |
macrophage dendritic cell progenitor | 7.89e-19 | 61 |
motile cell | 1.62e-18 | 386 |
defensive cell | 4.98e-18 | 48 |
phagocyte | 4.98e-18 | 48 |
hematopoietic oligopotent progenitor cell | 5.02e-18 | 161 |
hematopoietic multipotent progenitor cell | 5.02e-18 | 161 |
monopoietic cell | 5.15e-18 | 59 |
monocyte | 5.15e-18 | 59 |
monoblast | 5.15e-18 | 59 |
promonocyte | 5.15e-18 | 59 |
connective tissue cell | 5.76e-18 | 361 |
mesenchymal cell | 6.58e-18 | 354 |
multi fate stem cell | 6.90e-18 | 427 |
classical monocyte | 3.57e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-17 | 42 |
myeloid lineage restricted progenitor cell | 1.34e-16 | 66 |
somatic stem cell | 1.84e-16 | 433 |
stem cell | 2.72e-15 | 441 |
myeloid cell | 8.73e-15 | 108 |
common myeloid progenitor | 8.73e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.41e-19 | 76 |
immune system | 3.29e-18 | 93 |
hematopoietic system | 5.12e-18 | 98 |
blood island | 5.12e-18 | 98 |
connective tissue | 8.85e-18 | 371 |
bone element | 1.61e-17 | 82 |
hemolymphoid system | 4.72e-17 | 108 |
skeletal element | 9.31e-16 | 90 |
skeletal system | 8.28e-14 | 100 |
lateral plate mesoderm | 1.83e-13 | 203 |
musculoskeletal system | 2.20e-09 | 167 |
mesoderm | 4.40e-07 | 315 |
mesoderm-derived structure | 4.40e-07 | 315 |
presumptive mesoderm | 4.40e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.