FFCP PHASE1:Mm9::chr5:123439357..123439375,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=170|UniProt=|association_with_transcript=0bp_to_ENSMUST00000148466,uc008zmw.1_5end|description=CAGE_peak_1_at_ENSMUST00000148466_5end,CAGE_peak_1_at_uc008zmw.1_5end|id=chr5:123439357..123439375,+|ontology_enrichment_celltype=CL:0000838!2.16e-09!12;CL:0000084!1.10e-08!11;CL:0000827!1.10e-08!11;CL:0000542!4.11e-08!13;CL:0000051!4.11e-08!13;CL:0000791!4.30e-08!9;CL:0000789!4.30e-08!9;CL:0002420!4.30e-08!9;CL:0002419!4.30e-08!9;CL:0000790!4.30e-08!9;CL:0000624!2.45e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,2.88e-45,9;CL:0000789,2.88e-45,9;CL:0002420,2.88e-45,9;CL:0002419,2.88e-45,9;CL:0000790,2.88e-45,9;CL:0000838,1.82e-41,12;CL:0000624,3.38e-40,8;CL:0000542,3.52e-38,13;CL:0000051,3.52e-38,13;CL:0000084,7.56e-37,11;CL:0000827,7.56e-37,11;CL:0000893,2.49e-30,6;CL:0002489,2.49e-30,6;CL:0000898,2.49e-30,6;CL:0000809,2.49e-30,6;CL:0000810,2.49e-30,6;CL:0000895,2.49e-30,6;CL:0000808,2.49e-30,6;CL:0000894,2.49e-30,6;CL:0000806,2.49e-30,6;CL:0000807,2.49e-30,6;CL:0000805,2.49e-30,6;CL:0002425,2.49e-30,6;CL:0002436,2.49e-30,6;CL:0002427,2.49e-30,6;CL:0002428,2.49e-30,6;CL:0002429,2.49e-30,6;CL:0002433,2.49e-30,6;CL:0002431,2.49e-30,6;CL:0002432,2.49e-30,6;CL:0000738,6.81e-29,17;CL:0002087,6.81e-29,17;CL:0002031,3.24e-19,25;CL:0000988,1.05e-14,32;CL:0002032,1.05e-14,32;CL:0000037,1.05e-14,32;CL:0000837,1.05e-14,32;CL:0002320,8.65e-10,46;CL:0000134,8.65e-10,46;CL:0000219,4.04e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!6.11e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.33e-10,23;UBERON:0000974,4.33e-10,23;UBERON:0004807,4.33e-10,23;UBERON:0005058,4.33e-10,23;UBERON:0003351,4.33e-10,23;UBERON:0009113,4.33e-10,23;UBERON:0003295,4.33e-10,23;UBERON:0009722,4.33e-10,23;UBERON:0005562,4.33e-10,23;UBERON:0007690,4.33e-10,23;UBERON:0002384,8.65e-10,46;UBERON:0006562,1.22e-09,24;UBERON:0003408,1.22e-09,24;UBERON:0001557,1.22e-09,24;UBERON:0001042,1.22e-09,24;UBERON:0008814,1.22e-09,24;UBERON:0009145,1.22e-09,24;UBERON:0000072,1.74e-08,27;UBERON:0004177,7.53e-08,29;UBERON:0005057,7.53e-08,29|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0.233612640595526,3.74457637980571,6.05391505252167,4.44722600011788,4.79410311031414,2.39316476986009,6.33442700745461,3.67165690159789,0.333109761815663,0.202475267389826,0,0.473193248037357,0.137114433605739,0.84877930359606,0.0850432901510698,0.397163804803541,0.522399578277871,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0.219686182734472,0,0.279972843250725,0,3.18786951509699,15.2326049822382,13.4437519656986,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0.841299845405528,0,0.441737081903227,0.489963196859816,0.383381884072945,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0.52091337055676,0.279182999001381,0,0.916789486660861,0,0.142371680799103,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0,0.258937883647172,0,0,0.913396434936424,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.647067399789637,0.441683036920787,0.484875253135222,0,2.63502717310392,1.8850203613211,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.173824320192276,1.02286182932132,0.20778804455956,0.486723789203273,0.203678727700633,0.124406970610093,0,0.420883711772948,0.390361328888111,0,0.180062129805349,0,0.136072998302656,0,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0,0,0.23674473558521,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.350296027101508,0.822799249567402,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,1.05144974282064,0.720332286654991,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0.637819074629948,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.509935289981566,0,0,0,0,0,0.432021363287205,0.209088296014469,0.87345025498471,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0,0.241584120826006,0.576060012515731,0.632022241256357,0.405450430580328,0.205421914329655,0.51968329191118,0,0.198681354781265,0.480781798079875,1.03382669022204,0.403865799792591,0.533447646584999,0.403304740547362,0.584747284438515,0.384847366561318,0.818138315270983,0,0,0,0,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0.171853182343688,1.37016503954128,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p1@ENSMUST00000148466,p1@uc008zmw.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=170 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000148466,uc008zmw.1_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000148466_5end,CAGE_peak_1_at_uc008zmw.1_5end | |||
|id=chr5:123439357..123439375,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.16e-09!12;CL:0000084!1.10e-08!11;CL:0000827!1.10e-08!11;CL:0000542!4.11e-08!13;CL:0000051!4.11e-08!13;CL:0000791!4.30e-08!9;CL:0000789!4.30e-08!9;CL:0002420!4.30e-08!9;CL:0002419!4.30e-08!9;CL:0000790!4.30e-08!9;CL:0000624!2.45e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.88e-45,9;CL:0000789,2.88e-45,9;CL:0002420,2.88e-45,9;CL:0002419,2.88e-45,9;CL:0000790,2.88e-45,9;CL:0000838,1.82e-41,12;CL:0000624,3.38e-40,8;CL:0000542,3.52e-38,13;CL:0000051,3.52e-38,13;CL:0000084,7.56e-37,11;CL:0000827,7.56e-37,11;CL:0000893,2.49e-30,6;CL:0002489,2.49e-30,6;CL:0000898,2.49e-30,6;CL:0000809,2.49e-30,6;CL:0000810,2.49e-30,6;CL:0000895,2.49e-30,6;CL:0000808,2.49e-30,6;CL:0000894,2.49e-30,6;CL:0000806,2.49e-30,6;CL:0000807,2.49e-30,6;CL:0000805,2.49e-30,6;CL:0002425,2.49e-30,6;CL:0002436,2.49e-30,6;CL:0002427,2.49e-30,6;CL:0002428,2.49e-30,6;CL:0002429,2.49e-30,6;CL:0002433,2.49e-30,6;CL:0002431,2.49e-30,6;CL:0002432,2.49e-30,6;CL:0000738,6.81e-29,17;CL:0002087,6.81e-29,17;CL:0002031,3.24e-19,25;CL:0000988,1.05e-14,32;CL:0002032,1.05e-14,32;CL:0000037,1.05e-14,32;CL:0000837,1.05e-14,32;CL:0002320,8.65e-10,46;CL:0000134,8.65e-10,46;CL:0000219,4.04e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!6.11e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.33e-10,23;UBERON:0000974,4.33e-10,23;UBERON:0004807,4.33e-10,23;UBERON:0005058,4.33e-10,23;UBERON:0003351,4.33e-10,23;UBERON:0009113,4.33e-10,23;UBERON:0003295,4.33e-10,23;UBERON:0009722,4.33e-10,23;UBERON:0005562,4.33e-10,23;UBERON:0007690,4.33e-10,23;UBERON:0002384,8.65e-10,46;UBERON:0006562,1.22e-09,24;UBERON:0003408,1.22e-09,24;UBERON:0001557,1.22e-09,24;UBERON:0001042,1.22e-09,24;UBERON:0008814,1.22e-09,24;UBERON:0009145,1.22e-09,24;UBERON:0000072,1.74e-08,27;UBERON:0004177,7.53e-08,29;UBERON:0005057,7.53e-08,29 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0.233612640595526,3.74457637980571,6.05391505252167,4.44722600011788,4.79410311031414,2.39316476986009,6.33442700745461,3.67165690159789,0.333109761815663,0.202475267389826,0,0.473193248037357,0.137114433605739,0.84877930359606,0.0850432901510698,0.397163804803541,0.522399578277871,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0.219686182734472,0,0.279972843250725,0,3.18786951509699,15.2326049822382,13.4437519656986,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0.841299845405528,0,0.441737081903227,0.489963196859816,0.383381884072945,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0.52091337055676,0.279182999001381,0,0.916789486660861,0,0.142371680799103,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0,0.258937883647172,0,0,0.913396434936424,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.647067399789637,0.441683036920787,0.484875253135222,0,2.63502717310392,1.8850203613211,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.173824320192276,1.02286182932132,0.20778804455956,0.486723789203273,0.203678727700633,0.124406970610093,0,0.420883711772948,0.390361328888111,0,0.180062129805349,0,0.136072998302656,0,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0,0,0.23674473558521,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.350296027101508,0.822799249567402,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,1.05144974282064,0.720332286654991,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0.637819074629948,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.509935289981566,0,0,0,0,0,0.432021363287205,0.209088296014469,0.87345025498471,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0,0.241584120826006,0.576060012515731,0.632022241256357,0.405450430580328,0.205421914329655,0.51968329191118,0,0.198681354781265,0.480781798079875,1.03382669022204,0.403865799792591,0.533447646584999,0.403304740547362,0.584747284438515,0.384847366561318,0.818138315270983,0,0,0,0,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0.171853182343688,1.37016503954128,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p1@ENSMUST00000148466,p1@uc008zmw.1 | |||
}} |
Revision as of 06:21, 14 September 2013
Short description: | p1@ENSMUST00000148466, p1@uc008zmw.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000148466_5end, CAGE_peak_1_at_uc008zmw.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:170 |
Association with transcript: | 0bp_to_ENSMUST00000148466, uc008zmw.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.33e-10 | 23 |
neck | 4.33e-10 | 23 |
respiratory system epithelium | 4.33e-10 | 23 |
hemolymphoid system gland | 4.33e-10 | 23 |
pharyngeal epithelium | 4.33e-10 | 23 |
thymic region | 4.33e-10 | 23 |
pharyngeal gland | 4.33e-10 | 23 |
entire pharyngeal arch endoderm | 4.33e-10 | 23 |
thymus primordium | 4.33e-10 | 23 |
early pharyngeal endoderm | 4.33e-10 | 23 |
connective tissue | 8.65e-10 | 46 |
pharynx | 1.22e-09 | 24 |
gland of gut | 1.22e-09 | 24 |
upper respiratory tract | 1.22e-09 | 24 |
chordate pharynx | 1.22e-09 | 24 |
pharyngeal arch system | 1.22e-09 | 24 |
pharyngeal region of foregut | 1.22e-09 | 24 |
segment of respiratory tract | 1.74e-08 | 27 |
hemopoietic organ | 7.53e-08 | 29 |
immune organ | 7.53e-08 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.