FFCP PHASE1:Mm9::chr5:124527290..124527334,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=33|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:124527290..124527334,-|id=chr5:124527290..124527334,-|ontology_enrichment_celltype=CL:0000084!1.16e-15!11;CL:0000827!1.16e-15!11;CL:0000838!4.11e-14!12;CL:0000791!3.85e-13!9;CL:0000789!3.85e-13!9;CL:0002420!3.85e-13!9;CL:0002419!3.85e-13!9;CL:0000790!3.85e-13!9;CL:0000542!8.38e-13!13;CL:0000051!8.38e-13!13;CL:0000624!1.50e-11!8;CL:0000738!3.99e-09!17;CL:0002087!3.99e-09!17;CL:0000893!1.28e-08!6;CL:0002489!1.28e-08!6;CL:0000898!1.28e-08!6;CL:0000809!1.28e-08!6;CL:0000810!1.28e-08!6;CL:0000895!1.28e-08!6;CL:0000808!1.28e-08!6;CL:0000894!1.28e-08!6;CL:0000806!1.28e-08!6;CL:0000807!1.28e-08!6;CL:0000805!1.28e-08!6;CL:0002425!1.28e-08!6;CL:0002436!1.28e-08!6;CL:0002427!1.28e-08!6;CL:0002428!1.28e-08!6;CL:0002429!1.28e-08!6;CL:0002433!1.28e-08!6;CL:0002431!1.28e-08!6;CL:0002432!1.28e-08!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.29e-11,9;CL:0000789,1.29e-11,9;CL:0002420,1.29e-11,9;CL:0002419,1.29e-11,9;CL:0000790,1.29e-11,9;CL:0000084,1.51e-09,11;CL:0000827,1.51e-09,11;CL:0000838,9.06e-09,12;CL:0000542,4.14e-08,13;CL:0000051,4.14e-08,13;CL:0000625,6.29e-08,1;CL:0000624,1.15e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.29e-26!29;UBERON:0003408!3.33e-26!24;UBERON:0002370!7.76e-25!23;UBERON:0000974!7.76e-25!23;UBERON:0004807!7.76e-25!23;UBERON:0005058!7.76e-25!23;UBERON:0003351!7.76e-25!23;UBERON:0009113!7.76e-25!23;UBERON:0003295!7.76e-25!23;UBERON:0009722!7.76e-25!23;UBERON:0005562!7.76e-25!23;UBERON:0007690!7.76e-25!23;UBERON:0006562!1.55e-23!24;UBERON:0001557!1.55e-23!24;UBERON:0001042!1.55e-23!24;UBERON:0008814!1.55e-23!24;UBERON:0009145!1.55e-23!24;UBERON:0000072!3.23e-20!27;UBERON:0005057!6.72e-19!51;UBERON:0002193!2.15e-17!48;UBERON:0002390!6.00e-16!45;UBERON:0003061!6.00e-16!45;UBERON:0001004!6.10e-15!42;UBERON:0002405!8.48e-15!70;UBERON:0000063!3.45e-14!35;UBERON:0000065!6.68e-14!41;UBERON:0002530!3.52e-12!65;UBERON:0003929!5.07e-12!55;UBERON:0001041!1.03e-11!92;UBERON:0002368!2.02e-11!60;UBERON:0000077!1.27e-10!97;UBERON:0005911!6.06e-10!69;UBERON:0000949!3.27e-09!72;UBERON:0000490!7.50e-09!66;UBERON:0001007!2.35e-08!128;UBERON:0001555!2.35e-08!128;UBERON:0007026!2.35e-08!128;UBERON:0004119!4.50e-08!130;UBERON:0000925!4.50e-08!130;UBERON:0006595!4.50e-08!130;UBERON:0004921!5.96e-08!126;UBERON:0004185!5.96e-08!126;UBERON:0003081!1.81e-07!88;UBERON:0003104!9.49e-07!131;UBERON:0009142!9.49e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.61e-31,23;UBERON:0000974,1.61e-31,23;UBERON:0004807,1.61e-31,23;UBERON:0005058,1.61e-31,23;UBERON:0003351,1.61e-31,23;UBERON:0009113,1.61e-31,23;UBERON:0003295,1.61e-31,23;UBERON:0009722,1.61e-31,23;UBERON:0005562,1.61e-31,23;UBERON:0007690,1.61e-31,23;UBERON:0006562,3.65e-30,24;UBERON:0003408,3.65e-30,24;UBERON:0001557,3.65e-30,24;UBERON:0001042,3.65e-30,24;UBERON:0008814,3.65e-30,24;UBERON:0009145,3.65e-30,24;UBERON:0000072,1.07e-26,27;UBERON:0004177,8.77e-25,29;UBERON:0005057,8.77e-25,29;UBERON:0000077,2.39e-20,35;UBERON:0007811,9.44e-20,36;UBERON:0000065,3.33e-17,41;UBERON:0001004,9.10e-17,42;UBERON:0000153,2.38e-16,43;UBERON:0002390,1.43e-15,45;UBERON:0003061,1.43e-15,45;UBERON:0002193,1.59e-14,48;UBERON:0002405,1.59e-14,48;UBERON:0003929,1.60e-12,55;UBERON:0002368,2.25e-11,60;UBERON:0002530,2.10e-10,65;UBERON:0000490,3.16e-10,66;UBERON:0005911,1.00e-09,69;UBERON:0000949,2.88e-09,72;UBERON:0003081,4.47e-09,87;UBERON:0001041,3.29e-08,80|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.703943610758334,0.234064526321993,0.171217968225505,0.0797721589953364,1.36960583944965,1.57356724354195,0,0.202475267389826,0,0,0,0,0,0.595745707205312,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,3.36093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,5.05445516867349,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.433947175744535,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,1.21635129174099,0.821687657318618,1.68897069871134,1.9692936523423,1.19208812868759,1.68273629327956,0.886137163047463,0.706765149637033,0.914481679859998,1.51239277705261,2.53390489923356,1.92423683280659,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr5:124527290..124527334,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:124527290..124527334,- | |||
|id=chr5:124527290..124527334,- | |||
|ontology_enrichment_celltype=CL:0000084!1.16e-15!11;CL:0000827!1.16e-15!11;CL:0000838!4.11e-14!12;CL:0000791!3.85e-13!9;CL:0000789!3.85e-13!9;CL:0002420!3.85e-13!9;CL:0002419!3.85e-13!9;CL:0000790!3.85e-13!9;CL:0000542!8.38e-13!13;CL:0000051!8.38e-13!13;CL:0000624!1.50e-11!8;CL:0000738!3.99e-09!17;CL:0002087!3.99e-09!17;CL:0000893!1.28e-08!6;CL:0002489!1.28e-08!6;CL:0000898!1.28e-08!6;CL:0000809!1.28e-08!6;CL:0000810!1.28e-08!6;CL:0000895!1.28e-08!6;CL:0000808!1.28e-08!6;CL:0000894!1.28e-08!6;CL:0000806!1.28e-08!6;CL:0000807!1.28e-08!6;CL:0000805!1.28e-08!6;CL:0002425!1.28e-08!6;CL:0002436!1.28e-08!6;CL:0002427!1.28e-08!6;CL:0002428!1.28e-08!6;CL:0002429!1.28e-08!6;CL:0002433!1.28e-08!6;CL:0002431!1.28e-08!6;CL:0002432!1.28e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.29e-11,9;CL:0000789,1.29e-11,9;CL:0002420,1.29e-11,9;CL:0002419,1.29e-11,9;CL:0000790,1.29e-11,9;CL:0000084,1.51e-09,11;CL:0000827,1.51e-09,11;CL:0000838,9.06e-09,12;CL:0000542,4.14e-08,13;CL:0000051,4.14e-08,13;CL:0000625,6.29e-08,1;CL:0000624,1.15e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.29e-26!29;UBERON:0003408!3.33e-26!24;UBERON:0002370!7.76e-25!23;UBERON:0000974!7.76e-25!23;UBERON:0004807!7.76e-25!23;UBERON:0005058!7.76e-25!23;UBERON:0003351!7.76e-25!23;UBERON:0009113!7.76e-25!23;UBERON:0003295!7.76e-25!23;UBERON:0009722!7.76e-25!23;UBERON:0005562!7.76e-25!23;UBERON:0007690!7.76e-25!23;UBERON:0006562!1.55e-23!24;UBERON:0001557!1.55e-23!24;UBERON:0001042!1.55e-23!24;UBERON:0008814!1.55e-23!24;UBERON:0009145!1.55e-23!24;UBERON:0000072!3.23e-20!27;UBERON:0005057!6.72e-19!51;UBERON:0002193!2.15e-17!48;UBERON:0002390!6.00e-16!45;UBERON:0003061!6.00e-16!45;UBERON:0001004!6.10e-15!42;UBERON:0002405!8.48e-15!70;UBERON:0000063!3.45e-14!35;UBERON:0000065!6.68e-14!41;UBERON:0002530!3.52e-12!65;UBERON:0003929!5.07e-12!55;UBERON:0001041!1.03e-11!92;UBERON:0002368!2.02e-11!60;UBERON:0000077!1.27e-10!97;UBERON:0005911!6.06e-10!69;UBERON:0000949!3.27e-09!72;UBERON:0000490!7.50e-09!66;UBERON:0001007!2.35e-08!128;UBERON:0001555!2.35e-08!128;UBERON:0007026!2.35e-08!128;UBERON:0004119!4.50e-08!130;UBERON:0000925!4.50e-08!130;UBERON:0006595!4.50e-08!130;UBERON:0004921!5.96e-08!126;UBERON:0004185!5.96e-08!126;UBERON:0003081!1.81e-07!88;UBERON:0003104!9.49e-07!131;UBERON:0009142!9.49e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.61e-31,23;UBERON:0000974,1.61e-31,23;UBERON:0004807,1.61e-31,23;UBERON:0005058,1.61e-31,23;UBERON:0003351,1.61e-31,23;UBERON:0009113,1.61e-31,23;UBERON:0003295,1.61e-31,23;UBERON:0009722,1.61e-31,23;UBERON:0005562,1.61e-31,23;UBERON:0007690,1.61e-31,23;UBERON:0006562,3.65e-30,24;UBERON:0003408,3.65e-30,24;UBERON:0001557,3.65e-30,24;UBERON:0001042,3.65e-30,24;UBERON:0008814,3.65e-30,24;UBERON:0009145,3.65e-30,24;UBERON:0000072,1.07e-26,27;UBERON:0004177,8.77e-25,29;UBERON:0005057,8.77e-25,29;UBERON:0000077,2.39e-20,35;UBERON:0007811,9.44e-20,36;UBERON:0000065,3.33e-17,41;UBERON:0001004,9.10e-17,42;UBERON:0000153,2.38e-16,43;UBERON:0002390,1.43e-15,45;UBERON:0003061,1.43e-15,45;UBERON:0002193,1.59e-14,48;UBERON:0002405,1.59e-14,48;UBERON:0003929,1.60e-12,55;UBERON:0002368,2.25e-11,60;UBERON:0002530,2.10e-10,65;UBERON:0000490,3.16e-10,66;UBERON:0005911,1.00e-09,69;UBERON:0000949,2.88e-09,72;UBERON:0003081,4.47e-09,87;UBERON:0001041,3.29e-08,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.703943610758334,0.234064526321993,0.171217968225505,0.0797721589953364,1.36960583944965,1.57356724354195,0,0.202475267389826,0,0,0,0,0,0.595745707205312,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,3.36093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,5.05445516867349,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.433947175744535,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,1.21635129174099,0.821687657318618,1.68897069871134,1.9692936523423,1.19208812868759,1.68273629327956,0.886137163047463,0.706765149637033,0.914481679859998,1.51239277705261,2.53390489923356,1.92423683280659,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr5:124527290..124527334,- | |||
}} |
Revision as of 06:26, 14 September 2013
Short description: | p@chr5:124527290..124527334, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:124527290..124527334, - |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.29e-11 | 9 |
alpha-beta T cell | 1.29e-11 | 9 |
immature T cell | 1.29e-11 | 9 |
mature T cell | 1.29e-11 | 9 |
immature alpha-beta T cell | 1.29e-11 | 9 |
T cell | 1.51e-09 | 11 |
pro-T cell | 1.51e-09 | 11 |
lymphoid lineage restricted progenitor cell | 9.06e-09 | 12 |
lymphocyte | 4.14e-08 | 13 |
common lymphoid progenitor | 4.14e-08 | 13 |
CD8-positive, alpha-beta T cell | 6.29e-08 | 1 |
CD4-positive, alpha-beta T cell | 1.15e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.