FFCP PHASE1:Hg19::chrY:1460999..1461008,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=293|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10992|TSSclassifier=S|UniProt=|association_with_transcript=-1bp_to_uc004fpg.2,uc004fph.2_5end|description=CAGE_peak_4_at_SLC25A6_5end|id=chrY:1460999..1461008,-|ontology_enrichment_celltype=CL:0000037!3.93e-13!172;CL:0000566!3.93e-13!172;CL:0002032!7.70e-13!165;CL:0000837!7.70e-13!165;CL:0000738!1.01e-12!140;CL:0002031!1.55e-12!124;CL:0002057!5.33e-12!42;CL:0000988!1.31e-11!182;CL:0000860!8.51e-11!45;CL:0002009!9.75e-11!65;CL:0002087!1.40e-10!119;CL:0000763!2.06e-10!112;CL:0000049!2.06e-10!112;CL:0000557!4.45e-10!71;CL:0002194!1.84e-09!63;CL:0000576!1.84e-09!63;CL:0000040!1.84e-09!63;CL:0000559!1.84e-09!63;CL:0000839!2.16e-09!70;CL:0000003!4.74e-09!722;CL:0000766!2.52e-08!76;CL:0000197!4.76e-07!6;CL:0000098!4.76e-07!6;CL:0002167!4.76e-07!6;CL:0000453!5.67e-07!5;CL:0002393!7.18e-07!9;CL:0002397!7.18e-07!9|ontology_enrichment_celltype_v019=CL:0000860;2.21e-09;33!CL:0002057;2.21e-09;33!CL:0000473;3.74e-09;39!CL:0000234;3.74e-09;39!CL:0000197;1.46e-08;6!CL:0000098;1.46e-08;6!CL:0002167;1.46e-08;6!CL:0000576;1.99e-08;48!CL:0000766;4.04e-08;69!CL:0000875;1.73e-07;3!CL:0002396;1.73e-07;3!CL:0000898;6.91e-07;3|ontology_enrichment_celltype_v019_2=CL:0000473,1.39e-18,48;CL:0000234,1.39e-18,48;CL:0000860,4.59e-16,42;CL:0002057,4.59e-16,42;CL:0002009,4.57e-14,61;CL:0002194,1.67e-13,59;CL:0000576,1.67e-13,59;CL:0000040,1.67e-13,59;CL:0000559,1.67e-13,59;CL:0000557,2.47e-13,67;CL:0000738,3.06e-12,136;CL:0000766,3.99e-12,72;CL:0002032,1.04e-11,161;CL:0000837,1.04e-11,161;CL:0002087,1.43e-11,115;CL:0000037,1.53e-11,168;CL:0002031,1.56e-11,120;CL:0000839,2.07e-11,66;CL:0000763,3.73e-11,108;CL:0000049,3.73e-11,108;CL:0000988,2.14e-10,177;CL:0000197,1.35e-08,6;CL:0000098,1.35e-08,6;CL:0002167,1.35e-08,6;CL:0002393,1.56e-08,9;CL:0002397,1.56e-08,9;CL:0000875,1.11e-07,3;CL:0002396,1.11e-07,3|ontology_enrichment_development_v019=CL:0002057;1.02e-12;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.46e-12!9;UBERON:0002371!9.91e-10!80;UBERON:0001474!1.63e-08!86;UBERON:0004765!9.68e-07!101;UBERON:0001434!9.68e-07!101|ontology_enrichment_uberon_v019=UBERON:0001737;2.11e-12;9!UBERON:0001557;2.11e-12;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.77e-12,9;UBERON:0002371,4.70e-12,76;UBERON:0002405,1.98e-11,93;UBERON:0001474,1.14e-10,82;UBERON:0004765,4.01e-09,90;UBERON:0002193,8.39e-09,108;UBERON:0002390,1.43e-08,98;UBERON:0003061,1.43e-08,98;UBERON:0001434,1.45e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39557661096953,4.82155622419182,5.11217063271161,4.39139518911456,0,0,0,0,0,0,0,0,0,1.57345710739562,0,4.33485145285013,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,7.55751887377619,0,5.34586784883075,3.28934310417461,0,0,4.86705342405291,0,0,1.93645405075148,0,0,5.45812300115692,0,0,4.17207735198922,0,0,5.38551875578406,0,0,3.40431134814684,0,0,7.82224377630302,0,0,2.94622108790052,0,3.16882929467913,6.16552469898626,2.72556239160889,4.94245977044578,3.75442232103766,2.57160938715328,3.99017841237748,7.9566670879636,3.83594722905731,0,1.63841583378639,0,1.70692089026603,0.400395987036012,1.14950487990897,0,2.86216126360609,0,0,0,1.32171328579026,0,5.53106578027662,0,0,0,3.00935691703221,3.2592226663359,1.89379122293893,0,2.00538822393312,4.12448270464772,3.32300841875432,0.541607727530031,1.79327847615945,1.95089021339817,1.47994114143309,1.38175008892924,0.869409257205157,1.92772532110679,2.94294910898684,3.1360657141493,2.37949619664889,1.14966148080576,2.06176467289578,2.02415753615602,1.27426165729639,1.30216690771284,2.85135613334512,0.903450714466637,0.639933055772092,0,1.18388626022008,0.821127996921047,0,0,0,0,0,4.34732710268003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843881661206331,0,0,0,2.26304479546337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36613600079688,2.02301628093722,2.6511213287183,2.31617342738027,0.653638332277218,1.89816495288877,1.75280700608214,1.96221465125346,2.30848294167834,0,0,0,0,0,0,0,0,0,3.08822058537346,0,0,0,0,0,0,0,3.59384255422738,3.28744343860301,0,5.09284063834272,4.18559134916116,0,0,0,0,0,0,0,0.992425680696705,0,0,0,0,0,0,0,0,1.58744735730423,0,0,0,0,3.60411669412701,5.71652865261156,0,0,0,0,0,4.22651376278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,4.52031382288914,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53550464602372,0,3.15404830067869,1.87426263988341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62357900818653,0,0,0,3.15504974848913,3.242218353433,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=293 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10992 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_uc004fpg.2,uc004fph.2_5end | |||
|description=CAGE_peak_4_at_SLC25A6_5end | |||
|id=chrY:1460999..1461008,- | |||
|ontology_enrichment_celltype=CL:0000037!3.93e-13!172;CL:0000566!3.93e-13!172;CL:0002032!7.70e-13!165;CL:0000837!7.70e-13!165;CL:0000738!1.01e-12!140;CL:0002031!1.55e-12!124;CL:0002057!5.33e-12!42;CL:0000988!1.31e-11!182;CL:0000860!8.51e-11!45;CL:0002009!9.75e-11!65;CL:0002087!1.40e-10!119;CL:0000763!2.06e-10!112;CL:0000049!2.06e-10!112;CL:0000557!4.45e-10!71;CL:0002194!1.84e-09!63;CL:0000576!1.84e-09!63;CL:0000040!1.84e-09!63;CL:0000559!1.84e-09!63;CL:0000839!2.16e-09!70;CL:0000003!4.74e-09!722;CL:0000766!2.52e-08!76;CL:0000197!4.76e-07!6;CL:0000098!4.76e-07!6;CL:0002167!4.76e-07!6;CL:0000453!5.67e-07!5;CL:0002393!7.18e-07!9;CL:0002397!7.18e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-09;33!CL:0002057;2.21e-09;33!CL:0000473;3.74e-09;39!CL:0000234;3.74e-09;39!CL:0000197;1.46e-08;6!CL:0000098;1.46e-08;6!CL:0002167;1.46e-08;6!CL:0000576;1.99e-08;48!CL:0000766;4.04e-08;69!CL:0000875;1.73e-07;3!CL:0002396;1.73e-07;3!CL:0000898;6.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.39e-18,48;CL:0000234,1.39e-18,48;CL:0000860,4.59e-16,42;CL:0002057,4.59e-16,42;CL:0002009,4.57e-14,61;CL:0002194,1.67e-13,59;CL:0000576,1.67e-13,59;CL:0000040,1.67e-13,59;CL:0000559,1.67e-13,59;CL:0000557,2.47e-13,67;CL:0000738,3.06e-12,136;CL:0000766,3.99e-12,72;CL:0002032,1.04e-11,161;CL:0000837,1.04e-11,161;CL:0002087,1.43e-11,115;CL:0000037,1.53e-11,168;CL:0002031,1.56e-11,120;CL:0000839,2.07e-11,66;CL:0000763,3.73e-11,108;CL:0000049,3.73e-11,108;CL:0000988,2.14e-10,177;CL:0000197,1.35e-08,6;CL:0000098,1.35e-08,6;CL:0002167,1.35e-08,6;CL:0002393,1.56e-08,9;CL:0002397,1.56e-08,9;CL:0000875,1.11e-07,3;CL:0002396,1.11e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.46e-12!9;UBERON:0002371!9.91e-10!80;UBERON:0001474!1.63e-08!86;UBERON:0004765!9.68e-07!101;UBERON:0001434!9.68e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.11e-12;9!UBERON:0001557;2.11e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.77e-12,9;UBERON:0002371,4.70e-12,76;UBERON:0002405,1.98e-11,93;UBERON:0001474,1.14e-10,82;UBERON:0004765,4.01e-09,90;UBERON:0002193,8.39e-09,108;UBERON:0002390,1.43e-08,98;UBERON:0003061,1.43e-08,98;UBERON:0001434,1.45e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39557661096953,4.82155622419182,5.11217063271161,4.39139518911456,0,0,0,0,0,0,0,0,0,1.57345710739562,0,4.33485145285013,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,7.55751887377619,0,5.34586784883075,3.28934310417461,0,0,4.86705342405291,0,0,1.93645405075148,0,0,5.45812300115692,0,0,4.17207735198922,0,0,5.38551875578406,0,0,3.40431134814684,0,0,7.82224377630302,0,0,2.94622108790052,0,3.16882929467913,6.16552469898626,2.72556239160889,4.94245977044578,3.75442232103766,2.57160938715328,3.99017841237748,7.9566670879636,3.83594722905731,0,1.63841583378639,0,1.70692089026603,0.400395987036012,1.14950487990897,0,2.86216126360609,0,0,0,1.32171328579026,0,5.53106578027662,0,0,0,3.00935691703221,3.2592226663359,1.89379122293893,0,2.00538822393312,4.12448270464772,3.32300841875432,0.541607727530031,1.79327847615945,1.95089021339817,1.47994114143309,1.38175008892924,0.869409257205157,1.92772532110679,2.94294910898684,3.1360657141493,2.37949619664889,1.14966148080576,2.06176467289578,2.02415753615602,1.27426165729639,1.30216690771284,2.85135613334512,0.903450714466637,0.639933055772092,0,1.18388626022008,0.821127996921047,0,0,0,0,0,4.34732710268003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843881661206331,0,0,0,2.26304479546337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36613600079688,2.02301628093722,2.6511213287183,2.31617342738027,0.653638332277218,1.89816495288877,1.75280700608214,1.96221465125346,2.30848294167834,0,0,0,0,0,0,0,0,0,3.08822058537346,0,0,0,0,0,0,0,3.59384255422738,3.28744343860301,0,5.09284063834272,4.18559134916116,0,0,0,0,0,0,0,0.992425680696705,0,0,0,0,0,0,0,0,1.58744735730423,0,0,0,0,3.60411669412701,5.71652865261156,0,0,0,0,0,4.22651376278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,4.52031382288914,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53550464602372,0,3.15404830067869,1.87426263988341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62357900818653,0,0,0,3.15504974848913,3.242218353433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7235483311913,0,2.27235358192189,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,4.32729085561573,0,0,0,0,0,0.111443384277478,0,0.95497793895076,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,1.27600463892768,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1795818600905,0,0,1.5748172408605,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,3.59842489730884,0,0.414706207840855,0,3.65221543268214,0,1.90402606084398,0,0,0,2.78420255927096,2.3885753321917,0,4.46414416737631,3.36749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,1.0629187225069,1.79921933681429,0,0,0,0,0,0,0,0,2.51783113895,4.35454082023081,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86123831398592,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SLC25A6 | |||
}} |
Revision as of 12:44, 14 September 2013
Short description: | p4@SLC25A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC25A6_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_uc004fpg.2, uc004fph.2_5end |
EntrezGene: | SLC25A6 |
HGNC: | 10992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.39e-18 | 48 |
phagocyte | 1.39e-18 | 48 |
classical monocyte | 4.59e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.59e-16 | 42 |
macrophage dendritic cell progenitor | 4.57e-14 | 61 |
monopoietic cell | 1.67e-13 | 59 |
monocyte | 1.67e-13 | 59 |
monoblast | 1.67e-13 | 59 |
promonocyte | 1.67e-13 | 59 |
granulocyte monocyte progenitor cell | 2.47e-13 | 67 |
leukocyte | 3.06e-12 | 136 |
myeloid leukocyte | 3.99e-12 | 72 |
hematopoietic oligopotent progenitor cell | 1.04e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-11 | 161 |
nongranular leukocyte | 1.43e-11 | 115 |
hematopoietic stem cell | 1.53e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 1.56e-11 | 120 |
myeloid lineage restricted progenitor cell | 2.07e-11 | 66 |
myeloid cell | 3.73e-11 | 108 |
common myeloid progenitor | 3.73e-11 | 108 |
hematopoietic cell | 2.14e-10 | 177 |
receptor cell | 1.35e-08 | 6 |
sensory epithelial cell | 1.35e-08 | 6 |
olfactory epithelial cell | 1.35e-08 | 6 |
intermediate monocyte | 1.56e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.56e-08 | 9 |
non-classical monocyte | 1.11e-07 | 3 |
CD14-low, CD16-positive monocyte | 1.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.77e-12 | 9 |
bone marrow | 4.70e-12 | 76 |
immune system | 1.98e-11 | 93 |
bone element | 1.14e-10 | 82 |
skeletal element | 4.01e-09 | 90 |
hemolymphoid system | 8.39e-09 | 108 |
hematopoietic system | 1.43e-08 | 98 |
blood island | 1.43e-08 | 98 |
skeletal system | 1.45e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.