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FFCP PHASE1:Mm9::chr7:6124098..6124133,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=72667|HGNC=|UniProt=Q3TDV8|association_with_transcript=0bp_to_ENSMUST00000054680,ENSMUST00000108566,NM_001146024,NM_028316,uc009fat.2,uc009fau.2_5end|description=CAGE_peak_1_at_Zfp444_5end|id=chr7:6124098..6124133,+|ontology_enrichment_celltype=CL:0000117!5.22e-13!23;CL:0000337!5.22e-13!23;CL:0000540!5.65e-11!33;CL:0000047!5.65e-11!33;CL:0000031!5.65e-11!33;CL:0000404!5.65e-11!33;CL:0000221!5.03e-10!44;CL:0000133!5.03e-10!44;CL:0002319!7.47e-10!43;CL:0000393!8.09e-07!39;CL:0000211!8.09e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.22e-13,23;CL:0000337,5.22e-13,23;CL:0000540,5.65e-11,33;CL:0000047,5.65e-11,33;CL:0000031,5.65e-11,33;CL:0000404,5.65e-11,33;CL:0000221,5.03e-10,44;CL:0000133,5.03e-10,44;CL:0002319,7.47e-10,43;CL:0000393,8.08e-07,39;CL:0000211,8.08e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.91e-11!86;UBERON:0002346!2.01e-11!71;UBERON:0003075!2.01e-11!71;UBERON:0007284!2.01e-11!71;UBERON:0000073!2.25e-11!75;UBERON:0001016!2.25e-11!75;UBERON:0001017!4.92e-11!73;UBERON:0005743!4.92e-11!73;UBERON:0000153!6.64e-11!94;UBERON:0004121!2.38e-10!102;UBERON:0000924!2.38e-10!102;UBERON:0006601!2.38e-10!102;UBERON:0000033!1.61e-09!63;UBERON:0003056!5.61e-09!49;UBERON:0001049!5.36e-08!52;UBERON:0005068!5.36e-08!52;UBERON:0006241!5.36e-08!52;UBERON:0007135!5.36e-08!52;UBERON:0000955!4.51e-07!50;UBERON:0006238!4.51e-07!50;UBERON:0002616!9.82e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.17e-12,64;UBERON:0003075,9.17e-12,64;UBERON:0007284,9.17e-12,64;UBERON:0001016,2.29e-11,75;UBERON:0001017,5.02e-11,73;UBERON:0004121,2.31e-10,95;UBERON:0000924,2.31e-10,95;UBERON:0006601,2.31e-10,95;UBERON:0003056,5.72e-09,49;UBERON:0000073,8.86e-09,54;UBERON:0010371,5.45e-08,73;UBERON:0001049,5.45e-08,52;UBERON:0005068,5.45e-08,52;UBERON:0006241,5.45e-08,52;UBERON:0007135,5.45e-08,52|phase1_expression=2.7225304007815,2.09385244583617,3.18499467572675,2.72217790176147,2.50447864973174,2.85394762250213,2.33612640595526,4.39019299701359,2.111830832275,1.17032263160997,6.67750076079469,4.86610169871552,7.19043065711064,6.03200776691082,0.999329285446988,1.41732687172878,1.39912375625629,4.88966356305268,2.05671650408608,1.27316895539409,5.27268398936633,3.3758923408301,6.00759515019551,2.55987876469451,3.44113921600755,2.29692785646008,0.86152399231815,2.37018355954478,3.04037471130198,4.03248207615889,1.99557459589774,3.17515336729816,4.30545351309199,0,1.73310971850765,3.32469290716985,3.67504841272264,6.69650609179052,4.6880120671428,4.18818995179039,2.35292595212406,2.04913645487534,4.85510353031154,1.00717454380462,1.72340783073175,2.56965453026354,3.12956537739216,3.70642765846759,1.75748946187577,2.13872888981712,2.09979632438044,4.31257693094915,3.35565212115473,4.35217285206807,2.35265659399725,2.05807548828758,1.43266719969378,2.06268836910977,8.49729135610311,9.52183762689659,12.6766280701236,5.08266798103698,1.77858959222228,9.44894703145469,17.7995945262055,17.7620028736525,8.08920298399693,5.37905627450176,5.28817022773236,8.6403800532282,6.30974884054146,7.9982275633065,6.40518768759679,9.43179153955146,9.58454710182364,6.43453150627015,6.60695285996332,4.46905683298157,4.91540906419979,9.49581271657396,11.7104183811084,8.33461392890816,5.58365998002762,7.87867654044352,7.02871939773326,8.2496003932627,5.41012387036591,9.69277118291563,3.71058347332602,5.13886608726142,1.73918693221007,1.72084775396277,0.679971333707751,2.15881276655127,3.24888208723835,3.13618820968135,2.24711072210803,1.70430322578058,2.59786004602869,2.47337702157238,4.3661460130771,3.84979432242953,10.1922095882658,7.11066703153331,3.89683873820185,3.54703811665138,2.52762222507392,3.9964357901671,4.40194402200192,2.22663208597237,3.81667718885499,3.95805121805784,5.30415643688935,3.76806601381556,3.29248379979973,2.63899841792318,2.22475470960936,1.01219549843938,0,2.75003644910596,2.87093973998512,0.484875253135222,5.59175283654366,4.39171195517321,5.02672096352292,1.53274233125155,3.95389910869537,3.59941638596045,3.04968544975355,4.04434726393021,1.37250180845588,12.062817802835,2.25971616249959,2.55715457330331,3.74018480207208,3.89379031362618,3.05518091550949,1.8661045591514,2.0217820674694,5.47148825304832,5.98554037628437,9.42598628177239,5.04173963454978,5.87748789559289,9.0488543871266,12.9394857487698,17.8970293909082,14.2286853906459,6.03590380211958,4.16033376369202,4.04687585577082,2.6303487891309,1.94633074457919,1.39300866608867,3.08673204611915,5.7719937377363,5.61770549850588,4.11756651383544,2.27330799516474,3.52113813310353,3.51789089971644,3.96136535214233,2.3674473558521,2.36117078096885,3.39387648352232,3.25547522650571,2.95100741539581,2.91913355917924,1.97471819896177,1.97000956894914,1.4592385718254,1.75439984910399,2.19550115291051,1.20785776884335,3.15434922846191,6.38008596751563,1.98251269790279,1.05780226665418,5.33220626338085,4.18026009348789,2.83508414908605,1.61346819698674,2.44615848229357,1.90225626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|EntrezGene=72667
|HGNC=
|UniProt=Q3TDV8
|association_with_transcript=0bp_to_ENSMUST00000054680,ENSMUST00000108566,NM_001146024,NM_028316,uc009fat.2,uc009fau.2_5end
|description=CAGE_peak_1_at_Zfp444_5end
|id=chr7:6124098..6124133,+
|ontology_enrichment_celltype=CL:0000117!5.22e-13!23;CL:0000337!5.22e-13!23;CL:0000540!5.65e-11!33;CL:0000047!5.65e-11!33;CL:0000031!5.65e-11!33;CL:0000404!5.65e-11!33;CL:0000221!5.03e-10!44;CL:0000133!5.03e-10!44;CL:0002319!7.47e-10!43;CL:0000393!8.09e-07!39;CL:0000211!8.09e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.22e-13,23;CL:0000337,5.22e-13,23;CL:0000540,5.65e-11,33;CL:0000047,5.65e-11,33;CL:0000031,5.65e-11,33;CL:0000404,5.65e-11,33;CL:0000221,5.03e-10,44;CL:0000133,5.03e-10,44;CL:0002319,7.47e-10,43;CL:0000393,8.08e-07,39;CL:0000211,8.08e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!1.91e-11!86;UBERON:0002346!2.01e-11!71;UBERON:0003075!2.01e-11!71;UBERON:0007284!2.01e-11!71;UBERON:0000073!2.25e-11!75;UBERON:0001016!2.25e-11!75;UBERON:0001017!4.92e-11!73;UBERON:0005743!4.92e-11!73;UBERON:0000153!6.64e-11!94;UBERON:0004121!2.38e-10!102;UBERON:0000924!2.38e-10!102;UBERON:0006601!2.38e-10!102;UBERON:0000033!1.61e-09!63;UBERON:0003056!5.61e-09!49;UBERON:0001049!5.36e-08!52;UBERON:0005068!5.36e-08!52;UBERON:0006241!5.36e-08!52;UBERON:0007135!5.36e-08!52;UBERON:0000955!4.51e-07!50;UBERON:0006238!4.51e-07!50;UBERON:0002616!9.82e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.17e-12,64;UBERON:0003075,9.17e-12,64;UBERON:0007284,9.17e-12,64;UBERON:0001016,2.29e-11,75;UBERON:0001017,5.02e-11,73;UBERON:0004121,2.31e-10,95;UBERON:0000924,2.31e-10,95;UBERON:0006601,2.31e-10,95;UBERON:0003056,5.72e-09,49;UBERON:0000073,8.86e-09,54;UBERON:0010371,5.45e-08,73;UBERON:0001049,5.45e-08,52;UBERON:0005068,5.45e-08,52;UBERON:0006241,5.45e-08,52;UBERON:0007135,5.45e-08,52
|phase1_expression=2.7225304007815,2.09385244583617,3.18499467572675,2.72217790176147,2.50447864973174,2.85394762250213,2.33612640595526,4.39019299701359,2.111830832275,1.17032263160997,6.67750076079469,4.86610169871552,7.19043065711064,6.03200776691082,0.999329285446988,1.41732687172878,1.39912375625629,4.88966356305268,2.05671650408608,1.27316895539409,5.27268398936633,3.3758923408301,6.00759515019551,2.55987876469451,3.44113921600755,2.29692785646008,0.86152399231815,2.37018355954478,3.04037471130198,4.03248207615889,1.99557459589774,3.17515336729816,4.30545351309199,0,1.73310971850765,3.32469290716985,3.67504841272264,6.69650609179052,4.6880120671428,4.18818995179039,2.35292595212406,2.04913645487534,4.85510353031154,1.00717454380462,1.72340783073175,2.56965453026354,3.12956537739216,3.70642765846759,1.75748946187577,2.13872888981712,2.09979632438044,4.31257693094915,3.35565212115473,4.35217285206807,2.35265659399725,2.05807548828758,1.43266719969378,2.06268836910977,8.49729135610311,9.52183762689659,12.6766280701236,5.08266798103698,1.77858959222228,9.44894703145469,17.7995945262055,17.7620028736525,8.08920298399693,5.37905627450176,5.28817022773236,8.6403800532282,6.30974884054146,7.9982275633065,6.40518768759679,9.43179153955146,9.58454710182364,6.43453150627015,6.60695285996332,4.46905683298157,4.91540906419979,9.49581271657396,11.7104183811084,8.33461392890816,5.58365998002762,7.87867654044352,7.02871939773326,8.2496003932627,5.41012387036591,9.69277118291563,3.71058347332602,5.13886608726142,1.73918693221007,1.72084775396277,0.679971333707751,2.15881276655127,3.24888208723835,3.13618820968135,2.24711072210803,1.70430322578058,2.59786004602869,2.47337702157238,4.3661460130771,3.84979432242953,10.1922095882658,7.11066703153331,3.89683873820185,3.54703811665138,2.52762222507392,3.9964357901671,4.40194402200192,2.22663208597237,3.81667718885499,3.95805121805784,5.30415643688935,3.76806601381556,3.29248379979973,2.63899841792318,2.22475470960936,1.01219549843938,0,2.75003644910596,2.87093973998512,0.484875253135222,5.59175283654366,4.39171195517321,5.02672096352292,1.53274233125155,3.95389910869537,3.59941638596045,3.04968544975355,4.04434726393021,1.37250180845588,12.062817802835,2.25971616249959,2.55715457330331,3.74018480207208,3.89379031362618,3.05518091550949,1.8661045591514,2.0217820674694,5.47148825304832,5.98554037628437,9.42598628177239,5.04173963454978,5.87748789559289,9.0488543871266,12.9394857487698,17.8970293909082,14.2286853906459,6.03590380211958,4.16033376369202,4.04687585577082,2.6303487891309,1.94633074457919,1.39300866608867,3.08673204611915,5.7719937377363,5.61770549850588,4.11756651383544,2.27330799516474,3.52113813310353,3.51789089971644,3.96136535214233,2.3674473558521,2.36117078096885,3.39387648352232,3.25547522650571,2.95100741539581,2.91913355917924,1.97471819896177,1.97000956894914,1.4592385718254,1.75439984910399,2.19550115291051,1.20785776884335,3.15434922846191,6.38008596751563,1.98251269790279,1.05780226665418,5.33220626338085,4.18026009348789,2.83508414908605,1.61346819698674,2.44615848229357,1.90225626112559,4.74529061544512,2.47048432086016,3.77002813200404,2.38747766449381,2.14460495831032,3.59527763461689,3.6743468478698,1.59313018603494,3.98302592001472,4.22719496655997,5.63538678365402,5.09128319613286,4.07300223052014,5.89140887078676,2.71917109634306,3.24742325555125,4.70996183524124,4.56569506510662,7.41131567717872,2.00214126859313,1.76903095601883,1.12431056192427,2.63718157805054,4.58236603529592,2.80088436959562,4.02774592431135,4.05338066937588,5.21666685057355,5.75072826109418,4.83783231969054,4.05648975048929,6.06189307073068,2.87035861635059,8.68398338454061,2.40179147216586,5.30575952957357,4.4000543639347,3.39490171550376,2.34690248288502,3.35012514883632,2.85652369063216,3.12213836572478,2.83743259391144,1.99318220683897,2.87018583583477,2.94953966488328,2.24490476425664,2.60368305446721,7.53956419696361,4.35124547054968,2.45882136509518,1.65562047782839,5.29816946959713,3.8679856575427,3.27869890753351,1.51482556322624,2.83957397474631,3.12350995437311,4.30846795465598,3.10659437338318,5.12436950389506,4.81230102341015,2.02405350837447,5.26060544240361,3.95287777946523,5.78378369559253,2.98074178937364,4.80777129901589,3.58351310577867,3.79431282836832,0,3.64170954232472,5.13950046840077,1.69744571780308,2.36241514304618,3.3817866273832,2.32585463851399,3.99887102425256,2.13898427030833,2.52829406348653,3.16255825724996,2.06271086496374,6.46835250932197,7.38250485528372,7.24408629183425,4.50107773566344,5.67488747655275,2.31879462882692,3.9491764944509,4.26250928760439,1.87737366450968,4.02480934641258,1.7642271844397,0.98931751764888,1.13025098687134,1.80938774784468,2.38744688006273,1.64140899745061,1.1659233465194,3.8939313422207,2.39219233116994,2.68302928352189,1.29636169158798,1.13021074202815,2.1871076435364,1.37266903923914,1.35982743995084,2.51912614182584,1.93479963326193,1.90934123603023,3.00519193902079,4.87966721104437,3.13215488383224,3.3454127362315,1.52853794622324,1.07891477107857,1.98368293740806,3.14107130380836,3.11075935900303,1.86401793926078,2.81846469342095,5.23307911153926,5.46013018508422,5.83353565032143,4.52059382172059,3.37912250981556,2.8165737274981,3.51551839078665,3.35549902162275,4.59009829569411,4.89651010638371,3.47612232690996,3.85177909051312,4.72470402958205,3.37794139742267,3.58053391334963,2.98022032171897,3.60586348559907,3.54454865218985,2.82706059854813,3.27689268616499,4.2346997757473,3.99577311032985,4.2333210321745,4.9088298916259,0.680191150845634,3.32978930061097,1.61484941897056,2.51826924546118,2.31827512838629,2.81523713176773,2.38097111547445,2.78678892802786,2.50786052017682,2.82375921308533,2.30162618253588,5.15605962095457,3.26521046453006,6.16574267793578,1.5107877947794,2.70009000092722,0.900642406448441,4.98456649882625,5.1776031175182,5.18936737920883,3.99024873401031,3.58540572083682,2.91728060481953,3.77303692730368,2.94149613520023,1.55572709461131,1.64828045791115,1.92551525755089,4.29585259998456,1.77435509923168,3.58390048633545,1.96647165686753,3.07320731543373,2.92920891673628,1.90517476513229,3.24476112645595,2.31491064556446,4.12085900803307,3.09117732282234,3.08582327146874,3.01708870470874,2.14592570952589,2.61623549938191,3.29382831453657,2.62305284464197,3.10977553883713,1.31534855718921,2.71608227691724,5.05028044491965,2.72860541685601,3.05363895364247,2.86461730218783,3.25367366490529,3.47231899766054,4.99621155875892,2.33931608445408,2.14871054048298,2.10417165275728,1.54413993383661,1.62307484934295
|short_description=p1@Zfp444
}}

Revision as of 13:57, 14 September 2013

Short description:p1@Zfp444
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zfp444_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000054680, ENSMUST00000108566, NM_001146024, NM_028316, uc009fat.2, uc009fau.2_5end
EntrezGene:Zfp444
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zfp444

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.76
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F95.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F112.06
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C65.99
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C69.05
eyeball, neonate N01.CNhs11140.1532-43E712.94
eyeball, neonate N02.CNhs11205.1551-44G817.90
eyeball, neonate N16.CNhs11188.777-19A214.23
forelimb, embryo E11.CNhs10596.335-25E26.04
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G16.38
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F84.23
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G75.89
kidney, neonate N10.CNhs11206.758-6D52.72
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G25.31
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C77.24
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.61
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E44.23
thymus, neonate N20.CNhs11186.820-7A24.00
thymus, neonate N25.CNhs11125.1362-25G74.23
thymus, neonate N30.CNhs11132.1393-42G24.91
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I85.19
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.22e-1323
neuroblast (sensu Vertebrata)5.22e-1323
neuron5.65e-1133
neuronal stem cell5.65e-1133
neuroblast5.65e-1133
electrically signaling cell5.65e-1133
ectodermal cell5.03e-1044
neurectodermal cell5.03e-1044
neural cell7.47e-1043
electrically responsive cell8.08e-0739
electrically active cell8.08e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm9.17e-1264
neural plate9.17e-1264
presumptive neural plate9.17e-1264
nervous system2.29e-1175
central nervous system5.02e-1173
ectoderm-derived structure2.31e-1095
ectoderm2.31e-1095
presumptive ectoderm2.31e-1095
pre-chordal neural plate5.72e-0949
regional part of nervous system8.86e-0954
ecto-epithelium5.45e-0873
neural tube5.45e-0852
neural rod5.45e-0852
future spinal cord5.45e-0852
neural keel5.45e-0852







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