FFCP PHASE1:Mm9::chr9:42207983..42207995,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=21683|HGNC=|MCL_coexpression_id=69|UniProt=O08523,B7ZWA6|association_with_transcript=16bp_to_ENSMUST00000042190,NM_009347,uc009pau.1,uc012grn.1_5end|description=CAGE_peak_3_at_Tecta_5end|id=chr9:42207983..42207995,-|ontology_enrichment_celltype=CL:0000197!4.07e-21!2;CL:0002491!4.07e-21!2;CL:0000098!4.07e-21!2;CL:0000710!1.83e-11!1;CL:0002077!1.83e-11!1;CL:0005014!1.83e-11!1;CL:0002315!1.83e-11!1;CL:0002490!1.83e-11!1;CL:0000006!2.31e-11!1;CL:0002374!2.31e-11!1;CL:0000202!2.31e-11!1;CL:0000199!2.31e-11!1;CL:0000855!2.31e-11!1;CL:0000589!2.31e-11!1|ontology_enrichment_celltype_v019_2=CL:0000197,1.87e-86,2;CL:0002491,1.87e-86,2;CL:0000098,1.87e-86,2;CL:0000710,2.74e-44,1;CL:0002077,2.74e-44,1;CL:0005014,2.74e-44,1;CL:0002315,2.74e-44,1;CL:0002490,2.74e-44,1;CL:0002374,7.47e-44,1;CL:0000202,7.47e-44,1;CL:0000199,7.47e-44,1;CL:0000855,7.47e-44,1;CL:0000589,7.47e-44,1;CL:0000066,3.41e-08,25;CL:0000075,1.41e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003465!4.07e-21!2;UBERON:0008193!4.07e-21!2;UBERON:0000032!4.07e-21!2;UBERON:0005744!4.07e-21!2;UBERON:0008001!4.07e-21!2;UBERON:0007497!4.07e-21!2;UBERON:0009955!4.07e-21!2;UBERON:0003067!4.07e-21!2;UBERON:0002546!4.07e-21!2;UBERON:0007914!4.07e-21!2;UBERON:0003457!4.07e-21!2;UBERON:0004766!4.07e-21!2;UBERON:0005253!4.07e-21!2;UBERON:0002227!4.07e-21!2;UBERON:0001846!4.07e-21!2;UBERON:0003128!4.07e-21!2;UBERON:0002241!4.07e-21!2;UBERON:0002105!4.07e-21!2;UBERON:0001678!4.07e-21!2;UBERON:0003129!4.07e-21!2;UBERON:0001694!4.07e-21!2;UBERON:0004681!4.07e-21!2;UBERON:0001839!4.07e-21!2;UBERON:0001690!4.07e-21!2;UBERON:0001844!4.07e-21!2;UBERON:0001849!4.07e-21!2;UBERON:0002499!4.07e-21!2;UBERON:0005944!4.07e-21!2;UBERON:0001855!4.07e-21!2;UBERON:0001703!4.07e-21!2;UBERON:0003069!4.07e-21!2;UBERON:0003051!4.07e-21!2;UBERON:0004288!4.07e-21!2;UBERON:0004637!4.07e-21!2;UBERON:0004761!4.07e-21!2;UBERON:0010113!4.07e-21!2;UBERON:0003089!4.07e-21!2;UBERON:0009123!4.07e-21!2;UBERON:0009617!4.07e-21!2;UBERON:0005641!4.07e-21!2;UBERON:0000058!1.12e-07!6;UBERON:0000075!1.12e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0004766,1.87e-86,2;UBERON:0008193,1.87e-86,2;UBERON:0005913,1.87e-86,2;UBERON:0011158,1.87e-86,2;UBERON:0005744,1.87e-86,2;UBERON:0003457,1.87e-86,2;UBERON:0008001,1.87e-86,2;UBERON:0007497,1.87e-86,2;UBERON:0009955,1.87e-86,2;UBERON:0003067,1.87e-86,2;UBERON:0002546,1.87e-86,2;UBERON:0007914,1.87e-86,2;UBERON:0005253,1.87e-86,2;UBERON:0002227,1.87e-86,2;UBERON:0001846,1.87e-86,2;UBERON:0004339,1.87e-86,2;UBERON:0002105,1.87e-86,2;UBERON:0001678,1.87e-86,2;UBERON:0003128,1.87e-86,2;UBERON:0001694,1.87e-86,2;UBERON:0004681,1.87e-86,2;UBERON:0001839,1.87e-86,2;UBERON:0001690,1.87e-86,2;UBERON:0001844,1.87e-86,2;UBERON:0001849,1.87e-86,2;UBERON:0002499,1.87e-86,2;UBERON:0001855,1.87e-86,2;UBERON:0011137,1.87e-86,2;UBERON:0001703,1.87e-86,2;UBERON:0010323,1.87e-86,2;UBERON:0003129,1.87e-86,2;UBERON:0003069,1.87e-86,2;UBERON:0003051,1.87e-86,2;UBERON:0004637,1.87e-86,2;UBERON:0004761,1.87e-86,2;UBERON:0010113,1.87e-86,2;UBERON:0009123,1.87e-86,2;UBERON:0010351,1.87e-86,2;UBERON:0009617,1.87e-86,2;UBERON:0005641,1.87e-86,2;UBERON:0010349,1.87e-86,2;UBERON:0000075,6.66e-30,6;UBERON:0005856,6.66e-30,6;UBERON:0005866,6.66e-30,6;UBERON:0005863,6.66e-30,6;UBERON:0000058,7.57e-26,7;UBERON:0000485,5.67e-17,11;UBERON:0007524,5.67e-17,11;UBERON:0003077,5.67e-17,11;UBERON:0007285,5.67e-17,11;UBERON:0000020,1.13e-15,12;UBERON:0001032,1.13e-15,12;UBERON:0004456,1.13e-15,12;UBERON:0000033,1.42e-14,13;UBERON:0005085,1.42e-14,13;UBERON:0001474,3.83e-09,22;UBERON:0004765,3.83e-09,22;UBERON:0001434,3.83e-09,22|phase1_expression=18.5772662641561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,66.0555638752632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0|short_description=p3@Tecta}} | ||
|EntrezGene=21683 | |||
|HGNC= | |||
|MCL_coexpression_id=69 | |||
|UniProt=O08523,B7ZWA6 | |||
|association_with_transcript=16bp_to_ENSMUST00000042190,NM_009347,uc009pau.1,uc012grn.1_5end | |||
|description=CAGE_peak_3_at_Tecta_5end | |||
|id=chr9:42207983..42207995,- | |||
|ontology_enrichment_celltype=CL:0000197!4.07e-21!2;CL:0002491!4.07e-21!2;CL:0000098!4.07e-21!2;CL:0000710!1.83e-11!1;CL:0002077!1.83e-11!1;CL:0005014!1.83e-11!1;CL:0002315!1.83e-11!1;CL:0002490!1.83e-11!1;CL:0000006!2.31e-11!1;CL:0002374!2.31e-11!1;CL:0000202!2.31e-11!1;CL:0000199!2.31e-11!1;CL:0000855!2.31e-11!1;CL:0000589!2.31e-11!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.87e-86,2;CL:0002491,1.87e-86,2;CL:0000098,1.87e-86,2;CL:0000710,2.74e-44,1;CL:0002077,2.74e-44,1;CL:0005014,2.74e-44,1;CL:0002315,2.74e-44,1;CL:0002490,2.74e-44,1;CL:0002374,7.47e-44,1;CL:0000202,7.47e-44,1;CL:0000199,7.47e-44,1;CL:0000855,7.47e-44,1;CL:0000589,7.47e-44,1;CL:0000066,3.41e-08,25;CL:0000075,1.41e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003465!4.07e-21!2;UBERON:0008193!4.07e-21!2;UBERON:0000032!4.07e-21!2;UBERON:0005744!4.07e-21!2;UBERON:0008001!4.07e-21!2;UBERON:0007497!4.07e-21!2;UBERON:0009955!4.07e-21!2;UBERON:0003067!4.07e-21!2;UBERON:0002546!4.07e-21!2;UBERON:0007914!4.07e-21!2;UBERON:0003457!4.07e-21!2;UBERON:0004766!4.07e-21!2;UBERON:0005253!4.07e-21!2;UBERON:0002227!4.07e-21!2;UBERON:0001846!4.07e-21!2;UBERON:0003128!4.07e-21!2;UBERON:0002241!4.07e-21!2;UBERON:0002105!4.07e-21!2;UBERON:0001678!4.07e-21!2;UBERON:0003129!4.07e-21!2;UBERON:0001694!4.07e-21!2;UBERON:0004681!4.07e-21!2;UBERON:0001839!4.07e-21!2;UBERON:0001690!4.07e-21!2;UBERON:0001844!4.07e-21!2;UBERON:0001849!4.07e-21!2;UBERON:0002499!4.07e-21!2;UBERON:0005944!4.07e-21!2;UBERON:0001855!4.07e-21!2;UBERON:0001703!4.07e-21!2;UBERON:0003069!4.07e-21!2;UBERON:0003051!4.07e-21!2;UBERON:0004288!4.07e-21!2;UBERON:0004637!4.07e-21!2;UBERON:0004761!4.07e-21!2;UBERON:0010113!4.07e-21!2;UBERON:0003089!4.07e-21!2;UBERON:0009123!4.07e-21!2;UBERON:0009617!4.07e-21!2;UBERON:0005641!4.07e-21!2;UBERON:0000058!1.12e-07!6;UBERON:0000075!1.12e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004766,1.87e-86,2;UBERON:0008193,1.87e-86,2;UBERON:0005913,1.87e-86,2;UBERON:0011158,1.87e-86,2;UBERON:0005744,1.87e-86,2;UBERON:0003457,1.87e-86,2;UBERON:0008001,1.87e-86,2;UBERON:0007497,1.87e-86,2;UBERON:0009955,1.87e-86,2;UBERON:0003067,1.87e-86,2;UBERON:0002546,1.87e-86,2;UBERON:0007914,1.87e-86,2;UBERON:0005253,1.87e-86,2;UBERON:0002227,1.87e-86,2;UBERON:0001846,1.87e-86,2;UBERON:0004339,1.87e-86,2;UBERON:0002105,1.87e-86,2;UBERON:0001678,1.87e-86,2;UBERON:0003128,1.87e-86,2;UBERON:0001694,1.87e-86,2;UBERON:0004681,1.87e-86,2;UBERON:0001839,1.87e-86,2;UBERON:0001690,1.87e-86,2;UBERON:0001844,1.87e-86,2;UBERON:0001849,1.87e-86,2;UBERON:0002499,1.87e-86,2;UBERON:0001855,1.87e-86,2;UBERON:0011137,1.87e-86,2;UBERON:0001703,1.87e-86,2;UBERON:0010323,1.87e-86,2;UBERON:0003129,1.87e-86,2;UBERON:0003069,1.87e-86,2;UBERON:0003051,1.87e-86,2;UBERON:0004637,1.87e-86,2;UBERON:0004761,1.87e-86,2;UBERON:0010113,1.87e-86,2;UBERON:0009123,1.87e-86,2;UBERON:0010351,1.87e-86,2;UBERON:0009617,1.87e-86,2;UBERON:0005641,1.87e-86,2;UBERON:0010349,1.87e-86,2;UBERON:0000075,6.66e-30,6;UBERON:0005856,6.66e-30,6;UBERON:0005866,6.66e-30,6;UBERON:0005863,6.66e-30,6;UBERON:0000058,7.57e-26,7;UBERON:0000485,5.67e-17,11;UBERON:0007524,5.67e-17,11;UBERON:0003077,5.67e-17,11;UBERON:0007285,5.67e-17,11;UBERON:0000020,1.13e-15,12;UBERON:0001032,1.13e-15,12;UBERON:0004456,1.13e-15,12;UBERON:0000033,1.42e-14,13;UBERON:0005085,1.42e-14,13;UBERON:0001474,3.83e-09,22;UBERON:0004765,3.83e-09,22;UBERON:0001434,3.83e-09,22 | |||
|phase1_expression=18.5772662641561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,66.0555638752632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p3@Tecta | |||
}} |
Revision as of 17:51, 14 September 2013
Short description: | p3@Tecta |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tecta_5end |
Coexpression cluster: | MCL_coexpression_mm9:69 |
Association with transcript: | 16bp_to_ENSMUST00000042190, NM_009347, uc009pau.1, uc012grn.1_5end |
EntrezGene: | Tecta |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.87e-86 | 2 |
auditory epithelial cell | 1.87e-86 | 2 |
sensory epithelial cell | 1.87e-86 | 2 |
neurecto-epithelial cell | 2.74e-44 | 1 |
ecto-epithelial cell | 2.74e-44 | 1 |
auditory epithelial support cell | 2.74e-44 | 1 |
supporting cell of cochlea | 2.74e-44 | 1 |
organ of Corti supporting cell | 2.74e-44 | 1 |
ear hair cell | 7.47e-44 | 1 |
auditory hair cell | 7.47e-44 | 1 |
mechanoreceptor cell | 7.47e-44 | 1 |
sensory hair cell | 7.47e-44 | 1 |
cochlear inner hair cell | 7.47e-44 | 1 |
epithelial cell | 3.41e-08 | 25 |
columnar/cuboidal epithelial cell | 1.41e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.