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FFCP PHASE1:Mm9::chr9:43612284..43612295,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2495|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:43612284..43612295,+|id=chr9:43612284..43612295,+|ontology_enrichment_celltype=CL:0000117!1.20e-08!23;CL:0000337!1.20e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.86e-09,23;CL:0000337,1.86e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.66e-10!102;UBERON:0000924!9.66e-10!102;UBERON:0006601!9.66e-10!102;UBERON:0001049!2.40e-08!52;UBERON:0005068!2.40e-08!52;UBERON:0006241!2.40e-08!52;UBERON:0007135!2.40e-08!52;UBERON:0002346!5.42e-08!71;UBERON:0003075!5.42e-08!71;UBERON:0007284!5.42e-08!71;UBERON:0000033!1.98e-07!63;UBERON:0000955!6.22e-07!50;UBERON:0006238!6.22e-07!50;UBERON:0004111!7.13e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.99e-09,95;UBERON:0000924,1.99e-09,95;UBERON:0006601,1.99e-09,95;UBERON:0010371,1.46e-08,73;UBERON:0000073,2.97e-08,54;UBERON:0001049,7.23e-08,52;UBERON:0005068,7.23e-08,52;UBERON:0006241,7.23e-08,52;UBERON:0007135,7.23e-08,52;UBERON:0002346,2.00e-07,64;UBERON:0003075,2.00e-07,64;UBERON:0007284,2.00e-07,64|phase1_expression=0.960893082628764,0.697950815278722,1.36499771816861,1.20985684522732,2.00358291978539,1.00727563147134,2.10251376535973,0,0.281577444303333,0,0,0,0,0,0.666219523631325,0,0,0,0.137114433605739,0,2.29616883407888,0.0992909512008853,0,2.55987876469451,1.37645568640302,0,0.430761996159075,0.861884930743556,1.14014051673824,1.00812051903972,2.43903561720835,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,1.1330713617802,1.52065396829272,1.46837401729345,0.782391344348039,2.18025156380447,0.878744730937887,0.777719596297134,1.67983705950435,0,0,0,0,1.02903774414379,2.0057340795713,0.515672092277442,4.45096213891115,3.70293685490423,3.80298842103708,2.37191172448392,3.55717918444456,0.449949858640699,0.988866362566974,0,1.19840044207362,3.07374644257244,1.45165457231869,2.02508907497536,2.3135745748652,2.57085885963423,4.19650227808066,2.32732518508413,3.25874601462004,1.83843757322004,1.10115880999389,1.40456071893706,1.22885226604995,4.3522474950964,3.20206752608434,3.64639359389732,2.23346399201105,3.37657566019008,2.59757021220577,6.77645746589436,7.54569908235246,3.72798891650601,3.02904773332736,2.49386148352392,0,4.30211938490693,7.47968467078526,5.39703191637817,3.24888208723835,0.896053774194671,1.96622188184453,0.511290967734173,0.519572009205738,0.35333957451034,0.985903938436763,0,0,0,0.649473123033642,2.02687892380079,1.51657333504435,3.76806803072898,0.258937883647172,1.92974780784272,2.08182392119363,0.913396434936424,0.922461989024234,1.50722640552623,0.823120949949934,2.01066546127481,6.17987419335935,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,2.34224637609238,3.97948742945565,1.02182822083437,0.11981512450592,0,0.127070227073065,2.54644086988199,4.11750542536764,2.38743269014442,1.39059456153821,1.79000820131231,2.70124457927428,1.62241263067758,0.407357455401265,0.373220911830279,1.51633655060205,1.26265113531884,3.12289063110489,0.689706313300419,1.62055916824814,2.56198190320716,1.29269348387523,1.15302348256365,1.3118241438362,3.10444044886819,0.862271971731369,0.189106080167819,1.23165786914764,2.19195732427575,2.50242524303038,1.0447564995665,3.70407845534298,0.796137067273973,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0.16455984991348,0.820837320395476,0.0810688095458557,0.146199987425332,1.3173006917463,0,2.10289948564127,1.02904612379284,0.330418782983798,1.58670339998127,1.06644125267617,1.85789337488351,0.77320476793256,0.80673409849337,0.444756087689741,0.380451252225118,1.89811624617805,3.29397909448022,3.77002813200404,1.59165177632921,1.9496408711912,2.69645822596266,1.29682829924817,0.597423819763102,0.758671603812327,1.25673363870702,0,0.610953983535943,1.55161989734101,0.561086559122548,0.822074982615345,1.77132177575523,0.627994911365499,1.72756029490521,5.03969466048153,0.333690211432188,0,0.224862112384854,0.202860121388503,1.4470629585145,1.01850340712568,2.87696137450811,3.24270453550071,3.56929837144506,11.5014565221884,5.20997326735905,6.24075346229121,4.79899868099512,5.02312757861354,6.27176577772377,0.369506380333209,0.568474235311454,0.651859905768103,0.848725428875941,0.938760993154008,1.17254380209271,2.85652369063216,1.56106918286239,1.41871629695572,1.7717175171902,0.956728611944923,1.96635977658886,2.59027472798843,2.02508682014116,0,0,0.491764273019036,2.48343071674259,1.28440471990234,2.22702204525186,1.3114795630134,0,0,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,2.57057053137446,0.851640511249612,1.24645922567079,1.14020871547503,0.494910368917606,0,0.971122544619926,1.209294227859,0.943025398779491,0,0,0.775284879504663,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0.680879211507576,2.340794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|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=2495
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr9:43612284..43612295,+
|id=chr9:43612284..43612295,+
|ontology_enrichment_celltype=CL:0000117!1.20e-08!23;CL:0000337!1.20e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.86e-09,23;CL:0000337,1.86e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!9.66e-10!102;UBERON:0000924!9.66e-10!102;UBERON:0006601!9.66e-10!102;UBERON:0001049!2.40e-08!52;UBERON:0005068!2.40e-08!52;UBERON:0006241!2.40e-08!52;UBERON:0007135!2.40e-08!52;UBERON:0002346!5.42e-08!71;UBERON:0003075!5.42e-08!71;UBERON:0007284!5.42e-08!71;UBERON:0000033!1.98e-07!63;UBERON:0000955!6.22e-07!50;UBERON:0006238!6.22e-07!50;UBERON:0004111!7.13e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.99e-09,95;UBERON:0000924,1.99e-09,95;UBERON:0006601,1.99e-09,95;UBERON:0010371,1.46e-08,73;UBERON:0000073,2.97e-08,54;UBERON:0001049,7.23e-08,52;UBERON:0005068,7.23e-08,52;UBERON:0006241,7.23e-08,52;UBERON:0007135,7.23e-08,52;UBERON:0002346,2.00e-07,64;UBERON:0003075,2.00e-07,64;UBERON:0007284,2.00e-07,64
|phase1_expression=0.960893082628764,0.697950815278722,1.36499771816861,1.20985684522732,2.00358291978539,1.00727563147134,2.10251376535973,0,0.281577444303333,0,0,0,0,0,0.666219523631325,0,0,0,0.137114433605739,0,2.29616883407888,0.0992909512008853,0,2.55987876469451,1.37645568640302,0,0.430761996159075,0.861884930743556,1.14014051673824,1.00812051903972,2.43903561720835,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,1.1330713617802,1.52065396829272,1.46837401729345,0.782391344348039,2.18025156380447,0.878744730937887,0.777719596297134,1.67983705950435,0,0,0,0,1.02903774414379,2.0057340795713,0.515672092277442,4.45096213891115,3.70293685490423,3.80298842103708,2.37191172448392,3.55717918444456,0.449949858640699,0.988866362566974,0,1.19840044207362,3.07374644257244,1.45165457231869,2.02508907497536,2.3135745748652,2.57085885963423,4.19650227808066,2.32732518508413,3.25874601462004,1.83843757322004,1.10115880999389,1.40456071893706,1.22885226604995,4.3522474950964,3.20206752608434,3.64639359389732,2.23346399201105,3.37657566019008,2.59757021220577,6.77645746589436,7.54569908235246,3.72798891650601,3.02904773332736,2.49386148352392,0,4.30211938490693,7.47968467078526,5.39703191637817,3.24888208723835,0.896053774194671,1.96622188184453,0.511290967734173,0.519572009205738,0.35333957451034,0.985903938436763,0,0,0,0.649473123033642,2.02687892380079,1.51657333504435,3.76806803072898,0.258937883647172,1.92974780784272,2.08182392119363,0.913396434936424,0.922461989024234,1.50722640552623,0.823120949949934,2.01066546127481,6.17987419335935,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,2.34224637609238,3.97948742945565,1.02182822083437,0.11981512450592,0,0.127070227073065,2.54644086988199,4.11750542536764,2.38743269014442,1.39059456153821,1.79000820131231,2.70124457927428,1.62241263067758,0.407357455401265,0.373220911830279,1.51633655060205,1.26265113531884,3.12289063110489,0.689706313300419,1.62055916824814,2.56198190320716,1.29269348387523,1.15302348256365,1.3118241438362,3.10444044886819,0.862271971731369,0.189106080167819,1.23165786914764,2.19195732427575,2.50242524303038,1.0447564995665,3.70407845534298,0.796137067273973,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0.16455984991348,0.820837320395476,0.0810688095458557,0.146199987425332,1.3173006917463,0,2.10289948564127,1.02904612379284,0.330418782983798,1.58670339998127,1.06644125267617,1.85789337488351,0.77320476793256,0.80673409849337,0.444756087689741,0.380451252225118,1.89811624617805,3.29397909448022,3.77002813200404,1.59165177632921,1.9496408711912,2.69645822596266,1.29682829924817,0.597423819763102,0.758671603812327,1.25673363870702,0,0.610953983535943,1.55161989734101,0.561086559122548,0.822074982615345,1.77132177575523,0.627994911365499,1.72756029490521,5.03969466048153,0.333690211432188,0,0.224862112384854,0.202860121388503,1.4470629585145,1.01850340712568,2.87696137450811,3.24270453550071,3.56929837144506,11.5014565221884,5.20997326735905,6.24075346229121,4.79899868099512,5.02312757861354,6.27176577772377,0.369506380333209,0.568474235311454,0.651859905768103,0.848725428875941,0.938760993154008,1.17254380209271,2.85652369063216,1.56106918286239,1.41871629695572,1.7717175171902,0.956728611944923,1.96635977658886,2.59027472798843,2.02508682014116,0,0,0.491764273019036,2.48343071674259,1.28440471990234,2.22702204525186,1.3114795630134,0,0,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,2.57057053137446,0.851640511249612,1.24645922567079,1.14020871547503,0.494910368917606,0,0.971122544619926,1.209294227859,0.943025398779491,0,0,0.775284879504663,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0.680879211507576,2.34079422240703,3.75140182969988,3.85806663056866,1.77340233642274,1.96205699362278,2.96188237083818,2.74018454203139,4.69343416127421,1.90648863777438,0.220528398054962,6.43056386471772,2.9063596805263,1.93001359770099,5.96861720015682,5.25250879184196,3.20628920292836,0.18542530201051,0.512612642393558,1.03193433981611,0.185194527369712,0.188368457004691,0.410082683163076,0.457556346413045,0,0.139951452323658,0,4.77335309007557,0.474503990371703,0.203319467126849,2.91614420218863,3.13632444021703,1.52853794622324,1.61837215661785,1.32245529160537,1.57053565190418,0.90730481304255,0,1.12738587736838,1.94371509857172,2.81279433777066,2.91676782516071,2.58319646955462,2.87225413334323,1.40828686374905,0.651021924219751,0.419437377702843,0.724752362478018,0,0.632022241256357,4.66267995167378,3.49217254360413,2.07873316764472,1.25318686967237,1.58945083825012,1.08175904567972,0.295379054349154,1.00966449948148,0.762068066549998,0.806609481094724,0.682205165178267,0.673482891482306,0.701261413089414,5.66825959038028,0,0,0.167884616364078,3.67060228661162,2.064507229963,0.915758121336325,10.9327873330324,2.50786052017682,1.12950368523413,1.38097570952153,0.572895513439397,0.68741272937475,1.37016503954128,0,1.35004500046361,0.45032120322422,0.906284817968409,2.07104124700728,1.03787347584177,1.59609949360412,0.341467211508268,2.18796045361465,0.419226325255965,0.367687016900028,1.55572709461131,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,1.13175804831646,1.87283014939765,1.28050304809739,1.32101578597911,0.952587382566147,1.0429589335037,1.54327376370964,1.64834360321323,0.735994600671987,1.71434626192708,1.95223386775271,1.66905332963125,2.0348498328526,1.03520318456864,1.60767754994185,0.914639864363863,1.05227884575137,1.08643291076689,1.12228454331548,0.474540072496697,1.37906275325789,1.22769312950907,0.619747364743864,1.73615949883027,1.24905288968973,1.63752125911786,1.71896843238639,1.72159498861959,0.441182838239031,0.463735671240843
|short_description=p@chr9:43612284..43612295,+
}}

Revision as of 17:53, 14 September 2013

Short description:p@chr9:43612284..43612295, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:43612284..43612295, +
Coexpression cluster:MCL_coexpression_mm9:2495
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr9:43612284..43612295+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D93.03
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H15.02
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I55.97
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I23.49
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D510.93
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.86e-0923
neuroblast (sensu Vertebrata)1.86e-0923

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.99e-0995
ectoderm1.99e-0995
presumptive ectoderm1.99e-0995
ecto-epithelium1.46e-0873
regional part of nervous system2.97e-0854
neural tube7.23e-0852
neural rod7.23e-0852
future spinal cord7.23e-0852
neural keel7.23e-0852
neurectoderm2.00e-0764
neural plate2.00e-0764
presumptive neural plate2.00e-0764







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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