FFCP PHASE1:Hg19::chr1:64059332..64059373,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5236 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8905 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-31bp_to_ENST00000473117_5end | |||
|description=CAGE_peak_3_at_PGM1_5end | |||
|id=chr1:64059332..64059373,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.23e-07!15;CL:0000055!3.38e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.89e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.95e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.06e-12!365;UBERON:0007023!1.79e-09!115;UBERON:0000481!5.25e-09!347;UBERON:0002616!5.69e-09!59;UBERON:0000033!1.60e-08!123;UBERON:0000153!4.81e-08!129;UBERON:0007811!4.81e-08!129;UBERON:0000468!7.31e-08!659;UBERON:0000955!1.06e-07!69;UBERON:0006238!1.06e-07!69;UBERON:0001049!1.43e-07!57;UBERON:0005068!1.43e-07!57;UBERON:0006241!1.43e-07!57;UBERON:0007135!1.43e-07!57;UBERON:0001869!6.28e-07!32;UBERON:0001893!6.81e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.90e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.27e-10,114;UBERON:0000073,8.74e-09,53;UBERON:0002616,8.74e-09,53;UBERON:0000955,2.89e-08,68;UBERON:0006238,2.89e-08,68;UBERON:0001049,3.08e-08,56;UBERON:0005068,3.08e-08,56;UBERON:0006241,3.08e-08,56;UBERON:0007135,3.08e-08,56;UBERON:0001869,5.26e-07,32;UBERON:0001893,5.56e-07,34;UBERON:0002780,8.45e-07,41;UBERON:0001890,8.45e-07,41;UBERON:0003080,8.45e-07,41;UBERON:0006240,8.45e-07,41;UBERON:0002619,9.61e-07,22 | |||
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| |||
|short_description=p3@PGM1 | |||
}} |
Revision as of 18:49, 10 January 2014
Short description: | p3@PGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PGM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000473117_5end |
EntrezGene: | PGM1 |
HGNC: | 8905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.95e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.27e-10 | 114 |
regional part of nervous system | 8.74e-09 | 53 |
regional part of brain | 8.74e-09 | 53 |
brain | 2.89e-08 | 68 |
future brain | 2.89e-08 | 68 |
neural tube | 3.08e-08 | 56 |
neural rod | 3.08e-08 | 56 |
future spinal cord | 3.08e-08 | 56 |
neural keel | 3.08e-08 | 56 |
cerebral hemisphere | 5.26e-07 | 32 |
telencephalon | 5.56e-07 | 34 |
regional part of forebrain | 8.45e-07 | 41 |
forebrain | 8.45e-07 | 41 |
anterior neural tube | 8.45e-07 | 41 |
future forebrain | 8.45e-07 | 41 |
regional part of cerebral cortex | 9.61e-07 | 22 |