FFCP PHASE1:Hg19::chr1:147080146..147080150,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:147080146..147080150,+ | |||
|id=chr1:147080146..147080150,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.48e-07;1!CL:0002372;1.48e-07;1!CL:0002591;1.48e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.30e-07,1;CL:0002372,1.30e-07,1;CL:0002591,2.47e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.59e-09;3!UBERON:0005425;1.48e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!3.95e-08!143;DOID:162!2.65e-07!235;DOID:14566!6.09e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.75e-13;22!DOID:2994;2.75e-13;22!DOID:3347;5.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.22e-13,22;DOID:2994,2.22e-13,22;DOID:3347,6.37e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.94e-09!94;UBERON:0001016!7.94e-09!94;UBERON:0001017!1.39e-08!82;UBERON:0001049!3.22e-08!57;UBERON:0005068!3.22e-08!57;UBERON:0006241!3.22e-08!57;UBERON:0007135!3.22e-08!57;UBERON:0005743!1.02e-07!86;UBERON:0002780!2.37e-07!41;UBERON:0001890!2.37e-07!41;UBERON:0006240!2.37e-07!41;UBERON:0002346!2.87e-07!90;UBERON:0003075!3.90e-07!86;UBERON:0007284!3.90e-07!86;UBERON:0003080!6.13e-07!42;UBERON:0002020!8.24e-07!34;UBERON:0003528!8.24e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.48e-07;1!UBERON:0001785;1.48e-07;1!UBERON:0002464;1.48e-07;1!UBERON:0004904;1.48e-07;1!UBERON:0001021;1.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.22e-07,1;UBERON:0001785,1.22e-07,1;UBERON:0002464,1.22e-07,1;UBERON:0004904,1.22e-07,1;UBERON:0001021,1.22e-07,1;UBERON:0003902,1.22e-07,1;UBERON:0005425,1.22e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0.684372125364421,0.376627918784408,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,1.10799081706375,0,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.590129310341499,0.393010762749165,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0,1.15921234294021,0.444859689486181,0.267540828089713,0,0.566546713487831,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0.472674085820339,0.886917589850256,0.351339142772504,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0.66944122552934,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0.421352420106746,0,0.491337269247072,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0.600182192168805,0.206105058476878,0.772921620136887,0,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0.487894824518382,0.530119073285941,0.929551542956147,0.310983165046111,0.504641701751257,0.72995471815166,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,1.96565443335525,0,1.32438929824395,0.614942192715568,0.171567810298526,0,0,0.402115889646523,0,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0.492663237895943,0.088048434013226,0,0.720599767084807,0.25248486685276,0.126995788584338,0,0,0,0.308482478109971,0,0.285826432630578,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,1.42636905040718,0,0.410952645100767,0,0.112085143993527,0,0.215627574859517,0.256686072559497,0.508189248444927,0,0,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0.623912584592421,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.184161977871793,0,0,0.393373244878272,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0.764628819135115,0,0,0,0,0,0,0,0.103041011647722,0.54941678891006,1.32015199872941,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.534120355637366,1.92495971052672,0.245040215981032,0.743212700502875,0.721346064882224,0.284567373393656,0,0,0.383010740264733,0.211673582723883,0,0,0.456469358066384,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0,0.568272293612826,0.23874448473769,0,0,0.994147647766298,0.422008249231538,0.222617410045812,0.16480387422676,1.26675244876796,0,0,0.755798243562828,0.102268682502155,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,1.30213880542617,0.61221999997337,0,0.1137934482855,0.508507300585533,0.236387681767936,0.689486746482929,0.291604613383254,0.520874984799877,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0.10893846351899,0,0.461701551022782,0.341826167541004,0.23056390438806,0.269272933229316,0,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0.158936578980379,0.210998064528027,0,0.424059214301822,0.216388639742091,0.995261931078505,0.530745387020035,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,0.134802265961354,0,0.234264445725339,0.91227394607833,0.391329237864179,0.242780379534093,0.394584402849391,1.20990716048664,3.0607276163049,0.126373159256976,0.300646838828985,0.103688191397247,0,0,0,0,0.569219092059585,0.138674673013139,0,0,0.0870592065804026,0.52418000472609,0,0.19351266257817,0.219267951258557,0.0821154570532092,0,0.529536760149002,0.451961481561065,0,0,0.379864775735272,0,0.160317640503067,0,0,0.144090417154106,0.458146384663663,0.857974989309823,0,0,0,0,0,0.101998217636322,0.288950589901519,0.600420288709789,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0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| |||
|short_description=p@chr1:147080146..147080150,+ | |||
}} |
Revision as of 20:35, 10 January 2014
Short description: | p@chr1:147080146..147080150, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:147080146..147080150, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.30e-07 | 1 |
myotube | 1.30e-07 | 1 |
smooth muscle cell of the pulmonary artery | 2.47e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.22e-07 | 1 |
cranial nerve | 1.22e-07 | 1 |
nerve trunk | 1.22e-07 | 1 |
nerve connecting eye with brain | 1.22e-07 | 1 |
nerve | 1.22e-07 | 1 |
retinal neural layer | 1.22e-07 | 1 |
presumptive neural retina | 1.22e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.22e-13 | 22 |
germ cell cancer | 2.22e-13 | 22 |
osteosarcoma | 6.37e-08 | 1 |