FFCP PHASE1:Hg19::chr1:209806051..209806064,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C571 | |||
|description=CAGE_peak_at_chr1:209806051..209806064,- | |||
|id=chr1:209806051..209806064,- | |||
|ontology_enrichment_celltype=CL:0002076!2.73e-29!43;CL:0000066!1.46e-22!254;CL:0000223!3.74e-20!59;CL:0002368!1.65e-16!13;CL:0000063!8.41e-12!578;CL:0002202!9.82e-12!9;CL:0002632!9.82e-12!9;CL:0002251!2.58e-09!21;CL:0002159!2.99e-09!13;CL:0000860!5.63e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.57e-28;13!CL:0002076;1.02e-23;42!CL:0002202;5.77e-17;9!CL:0002632;5.77e-17;9!CL:0002159;1.05e-16;14!CL:0000244;2.54e-13;4!CL:0000731;2.54e-13;4!CL:0000349;5.31e-11;19!CL:0002328;7.51e-11;3!CL:0000307;1.21e-10;3!CL:0002621;5.48e-10;3!CL:0002577;1.53e-09;3!CL:0002077;3.70e-09;34!CL:0000240;8.11e-09;6!CL:0000311;8.11e-09;6!CL:0000079;8.11e-09;6!CL:0000237;8.11e-09;6!CL:0000362;1.20e-08;9!CL:0002327;6.87e-08;4!CL:0000317;5.50e-07;2!CL:1000448;5.50e-07;2!CL:0002308;5.50e-07;2!CL:0000575;5.50e-07;2!CL:0002140;5.50e-07;2!CL:0002536;9.71e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.29e-30,42;CL:0002368,5.04e-28,13;CL:0000223,2.55e-22,58;CL:0000066,7.68e-22,253;CL:0002202,7.43e-17,9;CL:0002632,7.43e-17,9;CL:0002159,1.02e-16,14;CL:0000244,2.18e-13,4;CL:0000731,2.18e-13,4;CL:0000349,4.64e-11,19;CL:0002328,7.77e-11,3;CL:0000068,1.14e-10,3;CL:0000069,1.14e-10,3;CL:0000307,1.14e-10,3;CL:0000377,1.14e-10,3;CL:0002077,1.69e-10,34;CL:0002621,6.49e-10,3;CL:0002577,1.22e-09,3;CL:0000240,9.16e-09,6;CL:0000311,9.16e-09,6;CL:0000079,9.16e-09,6;CL:0000237,9.16e-09,6;CL:0000036,9.16e-09,6;CL:0000357,9.16e-09,6;CL:0000114,9.16e-09,6;CL:0002321,9.47e-09,250;CL:0000362,1.29e-08,9;CL:0002327,7.13e-08,4;CL:0000575,5.03e-07,2;CL:0000317,6.40e-07,2;CL:1000448,6.40e-07,2;CL:0002308,6.40e-07,2;CL:0002140,6.40e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;1.15e-13;58!CL:0000377;1.21e-10;3!CL:0000357;8.11e-09;6!CL:0000114;8.11e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.07e-15!169;UBERON:0000925!2.07e-15!169;UBERON:0006595!2.07e-15!169;UBERON:0001004!6.00e-10!72;UBERON:0001007!2.03e-09!155;UBERON:0001555!2.03e-09!155;UBERON:0007026!2.03e-09!155;UBERON:0007196!2.19e-09!14;UBERON:0001558!2.19e-09!14;UBERON:0005631!4.58e-09!14;UBERON:0000158!4.58e-09!14;UBERON:0003124!2.81e-08!7;UBERON:0000065!6.71e-08!53;UBERON:0000062!9.83e-08!511;UBERON:0000365!7.51e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.07e-12;12!UBERON:0004815;7.51e-11;3!UBERON:0002031;7.51e-11;3!UBERON:0000365;1.18e-10;5!UBERON:0005631;4.05e-10;10!UBERON:0000158;4.05e-10;10!UBERON:0001949;5.48e-10;3!UBERON:0007196;1.03e-09;15!UBERON:0001558;1.03e-09;15!UBERON:0005910;7.18e-09;6!UBERON:0000478;2.31e-08;24!UBERON:0005911;4.32e-08;36!UBERON:0001911;6.87e-08;4!UBERON:0003729;8.74e-08;13!UBERON:0004807;9.12e-08;22!UBERON:0001987;2.97e-07;4!UBERON:0002419;5.50e-07;2!UBERON:0007771;5.50e-07;2!UBERON:0003297;5.50e-07;2!UBERON:0001821;5.50e-07;2!UBERON:0003487;5.50e-07;2!UBERON:0001820;5.50e-07;2!UBERON:0000305;8.91e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.26e-15,14;UBERON:0000158,1.26e-15,14;UBERON:0004815,7.77e-11,3;UBERON:0002031,7.77e-11,3;UBERON:0003124,9.84e-11,7;UBERON:0000365,1.05e-10,5;UBERON:0001949,6.49e-10,3;UBERON:0007196,1.19e-09,15;UBERON:0001558,1.19e-09,15;UBERON:0005910,6.50e-09,6;UBERON:0004119,8.60e-09,160;UBERON:0000925,8.60e-09,160;UBERON:0006595,8.60e-09,160;UBERON:0000478,2.09e-08,24;UBERON:0001004,5.32e-08,74;UBERON:0001911,7.13e-08,4;UBERON:0005333,7.13e-08,4;UBERON:0008425,7.13e-08,4;UBERON:0005311,7.13e-08,4;UBERON:0003729,1.02e-07,13;UBERON:0001987,2.52e-07,4;UBERON:0004340,2.52e-07,4;UBERON:0005157,4.89e-07,47;UBERON:0002419,6.40e-07,2;UBERON:0007771,6.40e-07,2;UBERON:0003297,6.40e-07,2;UBERON:0001821,6.40e-07,2;UBERON:0003487,6.40e-07,2;UBERON:0001820,6.40e-07,2;UBERON:0005089,6.40e-07,2;UBERON:0005088,6.40e-07,2;UBERON:0000305,8.78e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.982935746006035,1.39560233594486,1.09220686065086,2.63766978228454,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,10.1136334692682,8.13255980701275,18.1179464981726,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.619412741790207,0.863077176966451,0.512321413058201,0,1.72372840368309,0.645484683583826,0,0.564727018627814,1.09162460023138,0.224723484445085,2.75475503133812,0.641858054152187,0.639337125799041,0,0.398927315243264,0,2.61188314765726,1.70215567407342,0,0.251248665256743,0,0.434377689410233,0,1.10483290796269,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0,0.0654895377488563,2.5500670180478,2.59549109949101,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23312862571041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,4.09119180886252,2.29443676311203,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0.842923450390509,0,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,9.8775256867763,8.99214026060957,5.2275065654048,2.03694579348765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,12.9346238713122,3.96970272278682,4.11969204433102,5.23141089325132,6.13412286664338,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,3.33440328590885,1.66435439510497,2.41912234663744,0,0,0,0,0,0.160853921143607,0,0.462629081407967,0,0,0.519254429183621,0.232420756919918,0.483437798366489,31.0785028970092,12.430933506346,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0.509752546090077,3.3243040357149,0,0,0,0,0,0,0,0,0,1.14853107599234,5.85054221432869,0,0,0,0,0,0,0,0,0,19.0077652665125,9.80169343562041,2.16941611240793,4.55210013849975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,1.32687795048244,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,3.75266239629497,10.7248364085726,13.0669181833587,0,9.04061282609583,6.73885902670502,9.31203322427019,2.98640420269047,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,2.3874448473769,0,1.53580351049616,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0.179736702294654,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0.113942055847001,0,0,0,2.55200927785536,0.457987967009312,4.26427820814908,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0.450970258243478,0,0,0,0,0,0,0.277349346026277,1.21491816834592,0.391969589657511,0.0870592065804026,0,0,0.290268993867255,0.0730893170861856,0,0.193978032976839,0,0,0.137041924646751,0,0,0,0.240476460754601,0,0.19980960958213,0.432271251462318,0,0,0.720273989940749,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,3.05845565607623,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,1.34940933649081,0,0,0,0.521745061811734,0,0,0,0.727394636810238,0,0,0.398095888698616,0,0,0,0,0,0,0,1.36023555307363,0,0,0,0.308801447160972,0,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,2.09819261579167,1.86623178009892,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37406805901436,0.11796972334774,2.20114318226015,0.808679663052368,0,0,0,0,0,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0,0,0,0.590969204419841,0.222462803784138,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0.62164849248911,0,0,0,0,0,0.423387050190929,0.4582137370881,1.24082554265728,0.955538938977433,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,1.36410323371586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,0,0,0.217716747896961,0,0,0.0717222053926763,0.665320713092027,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:209806051..209806064,- | |||
}} |
Revision as of 23:58, 10 January 2014
Short description: | p@chr1:209806051..209806064, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:209806051..209806064, - |
Coexpression cluster: | C571_Bronchial_Prostate_Small_Tracheal_Mallassezderived_Urothelial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.26e-15 | 14 |
membranous layer | 1.26e-15 | 14 |
lower respiratory tract epithelium | 7.77e-11 | 3 |
epithelium of bronchus | 7.77e-11 | 3 |
chorion | 9.84e-11 | 7 |
urothelium | 1.05e-10 | 5 |
gingival epithelium | 6.49e-10 | 3 |
tracheobronchial tree | 1.19e-09 | 15 |
lower respiratory tract | 1.19e-09 | 15 |
transitional epithelium | 6.50e-09 | 6 |
endoderm-derived structure | 8.60e-09 | 160 |
endoderm | 8.60e-09 | 160 |
presumptive endoderm | 8.60e-09 | 160 |
extraembryonic structure | 2.09e-08 | 24 |
respiratory system | 5.32e-08 | 74 |
mammary gland | 7.13e-08 | 4 |
mammary bud | 7.13e-08 | 4 |
mammary ridge | 7.13e-08 | 4 |
mammary placode | 7.13e-08 | 4 |
mouth mucosa | 1.02e-07 | 13 |
placenta | 2.52e-07 | 4 |
allantois | 2.52e-07 | 4 |
epithelial fold | 4.89e-07 | 47 |
skin gland | 6.40e-07 | 2 |
epidermis gland | 6.40e-07 | 2 |
gland of integumental system | 6.40e-07 | 2 |
sebaceous gland | 6.40e-07 | 2 |
skin sebaceous gland | 6.40e-07 | 2 |
sweat gland | 6.40e-07 | 2 |
sweat gland placode | 6.40e-07 | 2 |
sebaceous gland placode | 6.40e-07 | 2 |
amnion | 8.78e-07 | 7 |