FFCP PHASE1:Hg19::chr1:221052733..221052749,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4978 | |||
|TSSclassifier=strong | |||
|UniProt=Q14774 | |||
|association_with_transcript=0bp_to_NM_021958,uc001hmv.3_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_HLX_5end | |||
|id=chr1:221052733..221052749,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.31e-27!76;CL:0000557!2.11e-26!71;CL:0002009!5.91e-26!65;CL:0002194!6.33e-26!63;CL:0000576!6.33e-26!63;CL:0000040!6.33e-26!63;CL:0000559!6.33e-26!63;CL:0000763!2.40e-25!112;CL:0000049!2.40e-25!112;CL:0000839!2.53e-25!70;CL:0002057!1.70e-21!42;CL:0000860!1.88e-21!45;CL:0000037!1.52e-10!172;CL:0000566!1.52e-10!172;CL:0002032!1.86e-10!165;CL:0000837!1.86e-10!165;CL:0000738!3.23e-10!140;CL:0000988!3.29e-10!182;CL:0002087!4.32e-08!119;CL:0002031!6.46e-08!124;CL:0000048!3.45e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.08e-29;33!CL:0002057;6.08e-29;33!CL:0000473;7.14e-26;39!CL:0000234;7.14e-26;39!CL:0000576;5.42e-21;48!CL:0000766;4.88e-16;69!CL:0000763;9.42e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.69e-36,72;CL:0002194,5.83e-34,59;CL:0000576,5.83e-34,59;CL:0000040,5.83e-34,59;CL:0000559,5.83e-34,59;CL:0002009,3.88e-32,61;CL:0000557,5.60e-32,67;CL:0000839,3.00e-31,66;CL:0000473,1.30e-29,48;CL:0000234,1.30e-29,48;CL:0000763,9.70e-29,108;CL:0000049,9.70e-29,108;CL:0000860,8.08e-28,42;CL:0002057,8.08e-28,42;CL:0000738,2.28e-14,136;CL:0000037,3.85e-13,168;CL:0002032,1.60e-12,161;CL:0000837,1.60e-12,161;CL:0000988,3.87e-12,177;CL:0002087,1.30e-11,115;CL:0002031,5.04e-10,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-20;42!CL:0000049;1.03e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.03e-25!112;UBERON:0002390!1.24e-24!102;UBERON:0003061!1.24e-24!102;UBERON:0002371!5.58e-22!80;UBERON:0001474!2.46e-20!86;UBERON:0002405!5.84e-19!115;UBERON:0004765!5.91e-18!101;UBERON:0001434!5.91e-18!101;UBERON:0002204!1.29e-17!167;UBERON:0003081!1.03e-15!216;UBERON:0000479!4.76e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.42e-30,108;UBERON:0002390,1.59e-30,98;UBERON:0003061,1.59e-30,98;UBERON:0002371,1.31e-27,76;UBERON:0002405,1.50e-27,93;UBERON:0001474,3.90e-25,82;UBERON:0004765,1.98e-23,90;UBERON:0003081,1.91e-22,203;UBERON:0001434,7.76e-20,100;UBERON:0000926,9.90e-16,315;UBERON:0004120,9.90e-16,315;UBERON:0006603,9.90e-16,315;UBERON:0002204,1.19e-15,167 | |||
|phase1_expression=1.63510541343501,0.214100523890983,1.26858963686374,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,1.36142988256051,0,2.6893005858071,1.20538905604795,1.46062018077475,0.975865597581014,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0.305653622991805,0.164201178899891,0.393553906568396,13.3743854128627,1.15148819429164,2.32224184974114,0,0,0,0,0,1.17440175733939,3.87796785972314,2.4065333696417,2.82114131930607,3.58264758783879,3.2389366601898,6.18181362322048,3.34415949192999,4.1566353805769,1.69808842831471,10.2268776238501,18.5025549609822,13.6270803193846,58.1138632490744,39.9610702185397,26.249527517633,19.3057581212506,13.5551783552603,8.12558919566051,6.02375486536335,7.36846605156184,5.39336362668203,17.7528657575123,18.2929545433373,10.2293940127847,15.1731598085889,43.0841500462725,18.7538890234385,17.7027635563436,22.1280237629545,21.1759564658495,79.8970755516444,59.449052699903,51.2565673504075,21.7943820948013,27.6208226990674,16.7725065343669,0.633765858935825,0.425208599930087,1.25795187305026,5.84108881961775,6.45760639218477,4.018139667427,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0.889509253863555,0,0.400395987036012,1.14950487990897,0,0,0,0.587237189370939,0.382273228125229,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,1.2786256184353,0,0.50133791063589,2.31754430337318,0,0,0,0.221729397462564,0,1.0478326039817,0,0,2.59637914923747,6.44280028007289,5.45127638127347,0.238490624305342,0,0,1.59009925893364,3.4409383804245,1.04142150482278,0,1.67799774483962,2.75118041940067,3.34391946458897,2.06733407335463,1.06729878806013,1.33888245105868,0,5.32190474002959,0.976248230192678,0,0.81014194788176,4.46498641420399,1.34717623575702,4.50445921933289,0,2.84779697870439,2.5648244150257,0,0,0,0,0.25326102332916,0.794455084879313,0,0,0,1.06748995729705,1.72667283892012,0.311211035399766,0,0.490385709340376,0,0,1.87457145467037,0,0.570471821544449,1.34503812496621,0.469737994575059,0.161872944368132,0.140450806702248,1.42907919878425,0,2.27316718586684,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0.250237039743928,0.277064115484183,0,0.919463387397059,0.751190294532984,0.453728732640084,0,0.640672166455702,0.635795703478686,0.600182192168805,0.309157587715317,0.515281080091258,0.744467425326359,0.843881661206331,0.0974370051611986,0,2.76149695926898,0,0,0,0.508681776931463,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0.928735856063958,0.721879481669586,0,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,5.3504621473082,0,0,0,1.18157981336281,0,0,0.171567810298526,0.109750285408626,0,0,0,0.651616610620649,2.07986957055916,0,0,0,1.01056513432752,0.925971025153221,0.380508304469197,0,0,1.47730203652438,2.10603838625314,2.0808362720422,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0.492663237895943,0.088048434013226,1.4512968087854,1.15295962733569,1.00993946741104,0.444485260045183,1.14596527667483,0,0,0,1.20137223137567,0,0,0,0,1.03417372606222,3.57656445851882,4.22651376278,0.531876233169741,1.04007436911366,0,0,0.532844358032199,3.14551586047925,5.96883765930587,0.823240336780769,2.28015329005615,1.42156779497018,0,0.301439377059586,1.74306691720059,0.799783929456456,4.86495122564762,3.01354254859276,0,0,0,0,0.144781306667579,0.821905290201534,0.358121926479791,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,22.4702107184155,38.8909896965232,33.9820721017549,1.8403723757871,1.00034104211935,0,0.623912584592421,2.14114786556594,1.10391690523754,0.937131319941706,0.902838299183157,0,1.03473071292505,1.32845119707087,1.84369168541703,1.04260337361699,0.391602314925481,0,1.86091223510599,3.01999881146064,1.921096040462,0,0,0,0,0.920771839728375,0,0.896974044789907,2.04682899626681,1.44768529029247,0,2.46735510084249,1.06537035187876,1.06765302817952,2.59627214591811,0.697262270759755,0,0,0,1.49258782613989,0.182091168006717,1.31124414959424,0,0,0,0,0,0,0.510281115829547,1.72732732881711,1.54227252690289,0.541892875087706,1.50506932156456,0,0,0,0.219259876645935,0.522870902049801,0,0,0,3.709476419318,0.824125183365091,0.495056999523528,0.574265537996172,0,0,1.45006077438183,0.308097234229289,0.307007349452259,0.137836572484531,1.50388342815583,0.870100163485371,1.78975917573812,1.15741646340759,0,0,0,0,0,0,0,4.31247012246524,1.06461206063404,1.73986598415015,0.37064843820784,0,0,0.632758849437452,1.90630193923825,0.255897791311334,0.855877976067841,1.59101623962968,0,1.07923474549989,2.19629623788844,2.5918728516051,1.61745985258653,0,0,0,0.974853958525138,0,0,0.848432591722276,0,1.65409603063837,0.66343897524122,0,1.73632660280006,0.655894752046633,0.811641507850816,0.6196469961995,0.281695602532241,0.860468113224309,1.17898849215745,0,4.25713276884717,0.633322905892992,0,0.379473173765715,2.44954304171488,0,0,0,2.16530741786592,0,0,0,0,1.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| |||
|short_description=p2@HLX | |||
}} |
Revision as of 00:17, 11 January 2014
Short description: | p2@HLX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HLX_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_NM_021958, uc001hmv.3_5end |
EntrezGene: | HLX |
HGNC: | 4978 |
UniProt: | Q14774 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.69e-36 | 72 |
monopoietic cell | 5.83e-34 | 59 |
monocyte | 5.83e-34 | 59 |
monoblast | 5.83e-34 | 59 |
promonocyte | 5.83e-34 | 59 |
macrophage dendritic cell progenitor | 3.88e-32 | 61 |
granulocyte monocyte progenitor cell | 5.60e-32 | 67 |
myeloid lineage restricted progenitor cell | 3.00e-31 | 66 |
defensive cell | 1.30e-29 | 48 |
phagocyte | 1.30e-29 | 48 |
myeloid cell | 9.70e-29 | 108 |
common myeloid progenitor | 9.70e-29 | 108 |
classical monocyte | 8.08e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.08e-28 | 42 |
leukocyte | 2.28e-14 | 136 |
hematopoietic stem cell | 3.85e-13 | 168 |
hematopoietic oligopotent progenitor cell | 1.60e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-12 | 161 |
hematopoietic cell | 3.87e-12 | 177 |
nongranular leukocyte | 1.30e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 5.04e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.42e-30 | 108 |
hematopoietic system | 1.59e-30 | 98 |
blood island | 1.59e-30 | 98 |
bone marrow | 1.31e-27 | 76 |
immune system | 1.50e-27 | 93 |
bone element | 3.90e-25 | 82 |
skeletal element | 1.98e-23 | 90 |
lateral plate mesoderm | 1.91e-22 | 203 |
skeletal system | 7.76e-20 | 100 |
mesoderm | 9.90e-16 | 315 |
mesoderm-derived structure | 9.90e-16 | 315 |
presumptive mesoderm | 9.90e-16 | 315 |
musculoskeletal system | 1.19e-15 | 167 |