FFCP PHASE1:Hg19::chr10:68718064..68718067,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_at_chr10:68718064..68718067,- | |||
|id=chr10:68718064..68718067,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.42e-07;82 | |||
|ontology_enrichment_disease=DOID:114!1.12e-10!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.03e-45!57;UBERON:0005068!1.03e-45!57;UBERON:0006241!1.03e-45!57;UBERON:0007135!1.03e-45!57;UBERON:0003075!6.77e-34!86;UBERON:0007284!6.77e-34!86;UBERON:0002616!2.99e-33!59;UBERON:0001017!2.08e-32!82;UBERON:0002346!3.93e-32!90;UBERON:0005743!1.16e-30!86;UBERON:0003076!3.66e-30!15;UBERON:0003057!3.66e-30!15;UBERON:0000073!1.18e-29!94;UBERON:0001016!1.18e-29!94;UBERON:0002298!1.10e-28!8;UBERON:0000955!2.69e-27!69;UBERON:0006238!2.69e-27!69;UBERON:0007023!3.63e-26!115;UBERON:0002020!9.16e-24!34;UBERON:0003528!9.16e-24!34;UBERON:0001893!1.61e-23!34;UBERON:0002780!3.74e-22!41;UBERON:0001890!3.74e-22!41;UBERON:0006240!3.74e-22!41;UBERON:0003080!1.47e-21!42;UBERON:0002791!5.66e-21!33;UBERON:0002308!7.35e-19!9;UBERON:0000125!7.35e-19!9;UBERON:0004733!1.35e-18!12;UBERON:0002028!1.35e-18!12;UBERON:0007277!1.35e-18!12;UBERON:0001869!3.42e-18!32;UBERON:0004732!4.30e-17!13;UBERON:0004121!8.44e-17!169;UBERON:0000924!2.86e-16!173;UBERON:0006601!2.86e-16!173;UBERON:0002240!2.10e-15!3;UBERON:0000153!2.14e-15!129;UBERON:0007811!2.14e-15!129;UBERON:0006331!2.43e-15!3;UBERON:0001896!3.57e-15!3;UBERON:0005290!3.57e-15!3;UBERON:0010096!3.57e-15!3;UBERON:0000033!8.08e-15!123;UBERON:0000988!1.01e-14!3;UBERON:0003056!6.37e-14!61;UBERON:0002420!1.61e-13!9;UBERON:0007245!1.61e-13!9;UBERON:0010009!1.61e-13!9;UBERON:0010011!1.61e-13!9;UBERON:0000454!1.61e-13!9;UBERON:0002619!4.38e-12!22;UBERON:0000025!1.02e-11!194;UBERON:0009663!2.31e-11!7;UBERON:0000956!1.52e-10!25;UBERON:0000203!1.52e-10!25;UBERON:0002148!1.56e-10!2;UBERON:0009662!1.56e-10!2;UBERON:0001950!2.42e-10!20;UBERON:0005174!2.00e-09!5;UBERON:0001137!2.00e-09!5;UBERON:0000349!4.51e-09!5;UBERON:0002680!1.47e-08!9;UBERON:0001895!1.47e-08!9;UBERON:0010092!1.47e-08!9;UBERON:0004111!2.74e-08!241;UBERON:0000483!3.31e-07!309;UBERON:0000119!4.46e-07!312;UBERON:0000477!8.35e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.55e-98;1!UBERON:0009661;1.55e-98;1!UBERON:0002950;1.55e-98;1!UBERON:0001891;1.55e-98;1!UBERON:0001896;5.04e-34;3!UBERON:0005290;5.04e-34;3!UBERON:0002298;8.34e-18;6!UBERON:0009663;1.78e-15;7!UBERON:0002420;2.31e-12;9!UBERON:0000125;2.31e-12;9!UBERON:0007245;2.31e-12;9!UBERON:0002308;2.31e-12;9!UBERON:0010009;2.31e-12;9!UBERON:0010011;2.31e-12;9!UBERON:0000454;2.31e-12;9!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13!UBERON:0000073;3.55e-08;53!UBERON:0002616;3.55e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,9.37e-99,1;UBERON:0009661,9.37e-99,1;UBERON:0002950,9.37e-99,1;UBERON:0001891,9.37e-99,1;UBERON:0009616,9.37e-99,1;UBERON:0010286,9.37e-99,1;UBERON:0001896,5.96e-34,3;UBERON:0005290,5.96e-34,3;UBERON:0010096,5.96e-34,3;UBERON:0002298,9.07e-18,6;UBERON:0009663,1.65e-15,7;UBERON:0002420,2.19e-12,9;UBERON:0000125,2.19e-12,9;UBERON:0007245,2.19e-12,9;UBERON:0002308,2.19e-12,9;UBERON:0010009,2.19e-12,9;UBERON:0010011,2.19e-12,9;UBERON:0000454,2.19e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.776503360757966,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.478901577171454,0,0.252071696221718,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0,1.72007499781742,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:68718064..68718067,- | |||
}} |
Revision as of 03:09, 11 January 2014
Short description: | p@chr10:68718064..68718067, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr10:68718064..68718067, - |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 9.37e-99 | 1 |
midbrain nucleus | 9.37e-99 | 1 |
regional part of midbrain | 9.37e-99 | 1 |
midbrain | 9.37e-99 | 1 |
presumptive midbrain | 9.37e-99 | 1 |
midbrain neural tube | 9.37e-99 | 1 |
medulla oblongata | 5.96e-34 | 3 |
myelencephalon | 5.96e-34 | 3 |
future myelencephalon | 5.96e-34 | 3 |
brainstem | 9.07e-18 | 6 |
telencephalic nucleus | 1.65e-15 | 7 |
basal ganglion | 2.19e-12 | 9 |
neural nucleus | 2.19e-12 | 9 |
nuclear complex of neuraxis | 2.19e-12 | 9 |
nucleus of brain | 2.19e-12 | 9 |
aggregate regional part of brain | 2.19e-12 | 9 |
collection of basal ganglia | 2.19e-12 | 9 |
cerebral subcortex | 2.19e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |