FFCP PHASE1:Hg19::chr10:126302461..126302478,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:126302461..126302478,+ | |||
|id=chr10:126302461..126302478,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.17e-11;3!UBERON:0003057;8.17e-11;3!UBERON:0006215;1.04e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.88e-22!57;UBERON:0005068!3.88e-22!57;UBERON:0006241!3.88e-22!57;UBERON:0007135!3.88e-22!57;UBERON:0002616!1.44e-17!59;UBERON:0007023!1.45e-16!115;UBERON:0002020!1.71e-16!34;UBERON:0003528!1.71e-16!34;UBERON:0002780!2.45e-16!41;UBERON:0001890!2.45e-16!41;UBERON:0006240!2.45e-16!41;UBERON:0003080!8.17e-16!42;UBERON:0002791!2.77e-15!33;UBERON:0005743!3.74e-15!86;UBERON:0001893!1.06e-14!34;UBERON:0002346!3.57e-14!90;UBERON:0003075!3.97e-14!86;UBERON:0007284!3.97e-14!86;UBERON:0000073!6.05e-14!94;UBERON:0001016!6.05e-14!94;UBERON:0001017!6.50e-14!82;UBERON:0000955!1.22e-13!69;UBERON:0006238!1.22e-13!69;UBERON:0001869!4.52e-12!32;UBERON:0003056!2.08e-11!61;UBERON:0000956!3.51e-10!25;UBERON:0000203!3.51e-10!25;UBERON:0002619!3.85e-10!22;UBERON:0002298!1.69e-08!8;UBERON:0000033!1.81e-08!123;UBERON:0002308!2.28e-08!9;UBERON:0000125!2.28e-08!9;UBERON:0000153!1.03e-07!129;UBERON:0007811!1.03e-07!129;UBERON:0001950!1.03e-07!20;UBERON:0003076!1.36e-07!15;UBERON:0003057!1.36e-07!15;UBERON:0006331!4.69e-07!3;UBERON:0002771!9.86e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;2.73e-29;1!UBERON:0009661;2.73e-29;1!UBERON:0002950;2.73e-29;1!UBERON:0001891;2.73e-29;1!UBERON:0001896;7.42e-11;3!UBERON:0005290;7.42e-11;3!UBERON:0002240;8.17e-11;3!UBERON:0005174;8.17e-11;3!UBERON:0001137;8.17e-11;3!UBERON:0004733;1.90e-10;12!UBERON:0002028;1.90e-10;12!UBERON:0004732;1.02e-09;13!UBERON:0000073;4.59e-07;53!UBERON:0002616;4.59e-07;53!UBERON:0002021;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.16e-29,1;UBERON:0009661,3.16e-29,1;UBERON:0002950,3.16e-29,1;UBERON:0001891,3.16e-29,1;UBERON:0009616,3.16e-29,1;UBERON:0010286,3.16e-29,1;UBERON:0003076,9.83e-18,15;UBERON:0003057,9.83e-18,15;UBERON:0001049,8.65e-13,56;UBERON:0005068,8.65e-13,56;UBERON:0006241,8.65e-13,56;UBERON:0007135,8.65e-13,56;UBERON:0001017,1.51e-12,81;UBERON:0001016,2.42e-11,89;UBERON:0001896,7.42e-11,3;UBERON:0005290,7.42e-11,3;UBERON:0010096,7.42e-11,3;UBERON:0002240,8.17e-11,3;UBERON:0005174,8.17e-11,3;UBERON:0001137,8.17e-11,3;UBERON:0004733,1.85e-10,12;UBERON:0002028,1.85e-10,12;UBERON:0007277,1.85e-10,12;UBERON:0004732,9.94e-10,13;UBERON:0000073,6.69e-09,53;UBERON:0002616,6.69e-09,53;UBERON:0003075,7.02e-09,82;UBERON:0007284,7.02e-09,82;UBERON:0002346,1.75e-08,86;UBERON:0010371,4.54e-07,104;UBERON:0002021,4.79e-07,5;UBERON:0000955,5.84e-07,68;UBERON:0006238,5.84e-07,68 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0,1.18219047581419,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.34945333648406,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,1.24632101408756,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,3.44045517414043,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0.256241518587947,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,6.35860729146341,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,2.94462700672418,0.594092800654172,0,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.271965960763659,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:126302461..126302478,+ | |||
}} |
Revision as of 05:27, 11 January 2014
Short description: | p@chr10:126302461..126302478, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126302461..126302478, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.16e-29 | 1 |
midbrain nucleus | 3.16e-29 | 1 |
regional part of midbrain | 3.16e-29 | 1 |
midbrain | 3.16e-29 | 1 |
presumptive midbrain | 3.16e-29 | 1 |
midbrain neural tube | 3.16e-29 | 1 |
posterior neural tube | 9.83e-18 | 15 |
chordal neural plate | 9.83e-18 | 15 |
neural tube | 8.65e-13 | 56 |
neural rod | 8.65e-13 | 56 |
future spinal cord | 8.65e-13 | 56 |
neural keel | 8.65e-13 | 56 |
central nervous system | 1.51e-12 | 81 |
nervous system | 2.42e-11 | 89 |
medulla oblongata | 7.42e-11 | 3 |
myelencephalon | 7.42e-11 | 3 |
future myelencephalon | 7.42e-11 | 3 |
spinal cord | 8.17e-11 | 3 |
dorsal region element | 8.17e-11 | 3 |
dorsum | 8.17e-11 | 3 |
segmental subdivision of hindbrain | 1.85e-10 | 12 |
hindbrain | 1.85e-10 | 12 |
presumptive hindbrain | 1.85e-10 | 12 |
segmental subdivision of nervous system | 9.94e-10 | 13 |
regional part of nervous system | 6.69e-09 | 53 |
regional part of brain | 6.69e-09 | 53 |
neural plate | 7.02e-09 | 82 |
presumptive neural plate | 7.02e-09 | 82 |
neurectoderm | 1.75e-08 | 86 |
ecto-epithelium | 4.54e-07 | 104 |
occipital lobe | 4.79e-07 | 5 |
brain | 5.84e-07 | 68 |
future brain | 5.84e-07 | 68 |