FFCP PHASE1:Hg19::chr11:31014065..31014073,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=100506627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24799 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=157bp_to_ENST00000483396_5end | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_1_at_DCDC5_5end | |||
|id=chr11:31014065..31014073,- | |||
|ontology_enrichment_celltype=CL:0000064!3.75e-19!3;CL:0005012!3.75e-19!3;CL:0000067!3.75e-19!3;CL:0002304!3.75e-19!3;CL:0000181!1.74e-12!12;CL:0000417!1.74e-12!12;CL:0000668!1.74e-12!12;CL:0000414!1.74e-12!12;CL:0000412!1.74e-12!12;CL:0000182!1.74e-12!12;CL:0002127!7.03e-08!1;CL:0000914!7.03e-08!1;CL:0000911!7.03e-08!1;CL:0000814!7.03e-08!1;CL:0002042!7.03e-08!1;CL:0002039!7.03e-08!1;CL:0002040!7.03e-08!1;CL:0002041!7.03e-08!1;CL:0002553!9.71e-08!1;CL:0000342!1.10e-07!1;CL:0002565!1.10e-07!1;CL:0000319!2.50e-07!1;CL:0000306!8.95e-07!4;CL:0002222!8.95e-07!4;CL:0002224!8.95e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.88e-21;1!CL:0000911;1.88e-21;1!CL:0000814;1.88e-21;1!CL:0000342;5.71e-21;1!CL:0002553;5.71e-21;1!CL:0002565;5.71e-21;1!CL:0000082;4.58e-10;19!CL:0000182;1.44e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.88e-21,1;CL:0000914,1.88e-21,1;CL:0000911,1.88e-21,1;CL:0000814,1.88e-21,1;CL:0002042,1.88e-21,1;CL:0002039,1.88e-21,1;CL:0002040,1.88e-21,1;CL:0002041,1.88e-21,1;CL:0002553,5.16e-21,1;CL:0000342,7.72e-21,1;CL:0002565,7.72e-21,1;CL:0000893,2.02e-11,2;CL:0002489,2.02e-11,2;CL:0000809,2.02e-11,2;CL:0000808,2.02e-11,2;CL:0000894,2.02e-11,2;CL:0000806,2.02e-11,2;CL:0000807,2.02e-11,2;CL:0000805,2.02e-11,2;CL:0002425,2.02e-11,2;CL:0000082,4.17e-10,19;CL:0000182,1.57e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002425;2.02e-11;2!UBERON:0008947;8.59e-07;29 | |||
|ontology_enrichment_disease=DOID:3030!2.50e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.40e-12;15!DOID:0050615;7.81e-12;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.25e-12,15;DOID:0050615,6.99e-12,16 | |||
|ontology_enrichment_uberon=UBERON:0000488!4.27e-25!4;UBERON:0007625!1.96e-19!11;UBERON:0001778!3.75e-19!3;UBERON:0001775!3.75e-19!3;UBERON:0002203!8.36e-17!6;UBERON:0001768!8.36e-17!6;UBERON:0001801!3.66e-15!14;UBERON:0009497!4.72e-11!25;UBERON:0000015!4.72e-11!25;UBERON:0002423!4.72e-11!25;UBERON:0006235!4.72e-11!25;UBERON:0004161!4.72e-11!25;UBERON:0000019!4.94e-11!19;UBERON:0000047!4.94e-11!19;UBERON:0004088!4.94e-11!19;UBERON:0003072!4.94e-11!19;UBERON:0003071!4.94e-11!19;UBERON:0004128!4.94e-11!19;UBERON:0002107!5.61e-11!19;UBERON:0006925!5.61e-11!19;UBERON:0008836!5.61e-11!19;UBERON:0005057!1.08e-10!26;UBERON:0000970!1.87e-10!20;UBERON:0002368!4.83e-10!35;UBERON:0002104!6.25e-10!21;UBERON:0001456!6.25e-10!21;UBERON:0008835!2.09e-09!22;UBERON:0003894!2.09e-09!22;UBERON:0005172!2.86e-09!55;UBERON:0005173!2.86e-09!55;UBERON:0002200!3.16e-09!11;UBERON:0006876!3.16e-09!11;UBERON:0000020!5.10e-09!23;UBERON:0009854!5.66e-09!23;UBERON:0001032!1.28e-08!24;UBERON:0004456!1.28e-08!24;UBERON:0005911!1.63e-08!82;UBERON:0007499!3.27e-08!25;UBERON:0002417!3.43e-08!61;UBERON:0000916!3.43e-08!61;UBERON:0009856!7.11e-08!26;UBERON:0002506!1.10e-07!1;UBERON:0001769!1.10e-07!1;UBERON:0003929!1.13e-07!54;UBERON:0000949!1.49e-07!45;UBERON:0005177!3.86e-07!107;UBERON:0001048!4.65e-07!168;UBERON:0005085!4.89e-07!29;UBERON:0010077!8.95e-07!4;UBERON:0005389!8.95e-07!4;UBERON:0000484!8.95e-07!4;UBERON:0002546!8.95e-07!4;UBERON:0000965!8.95e-07!4;UBERON:0001803!8.95e-07!4;UBERON:0003073!8.95e-07!4;UBERON:0005426!8.95e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;5.71e-21;1!UBERON:0001769;5.71e-21;1!UBERON:0004802;4.58e-10;19!UBERON:0000115;4.58e-10;19!UBERON:0002048;8.94e-09;22!UBERON:0004807;8.94e-09;22!UBERON:0000117;8.94e-09;22!UBERON:0000171;8.94e-09;22!UBERON:0000170;8.94e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,7.72e-21,1;UBERON:0001769,7.72e-21,1;UBERON:0004807,8.33e-12,28;UBERON:0004802,4.17e-10,19;UBERON:0000115,4.17e-10,19;UBERON:0002048,8.25e-09,22;UBERON:0000117,8.25e-09,22;UBERON:0000171,8.25e-09,22;UBERON:0000170,8.25e-09,22;UBERON:0005597,8.25e-09,22;UBERON:0000118,8.25e-09,22;UBERON:0005911,1.16e-08,82;UBERON:0001041,3.73e-08,87;UBERON:0000072,3.69e-07,47;UBERON:0005177,5.38e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0.122988438543114,1.20097467208968,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61302349561811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47787785689595,0,0,0.503865495708552,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,1.71594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,17.1086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,3.23891386827932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78380136166353,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@DCDC5 | |||
}} |
Revision as of 07:04, 11 January 2014
Short description: | p1@DCDC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DCDC5_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | 157bp_to_ENST00000483396_5end |
EntrezGene: | DCDC5 |
HGNC: | 24799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.88e-21 | 1 |
immature NK T cell | 1.88e-21 | 1 |
effector T cell | 1.88e-21 | 1 |
mature NK T cell | 1.88e-21 | 1 |
immature NK T cell stage IV | 1.88e-21 | 1 |
immature NK T cell stage I | 1.88e-21 | 1 |
immature NK T cell stage II | 1.88e-21 | 1 |
immature NK T cell stage III | 1.88e-21 | 1 |
lung fibroblast | 5.16e-21 | 1 |
pigment cell (sensu Vertebrata) | 7.72e-21 | 1 |
iris pigment epithelial cell | 7.72e-21 | 1 |
thymocyte | 2.02e-11 | 2 |
double negative thymocyte | 2.02e-11 | 2 |
double-positive, alpha-beta thymocyte | 2.02e-11 | 2 |
DN4 thymocyte | 2.02e-11 | 2 |
DN1 thymic pro-T cell | 2.02e-11 | 2 |
DN2 thymocyte | 2.02e-11 | 2 |
DN3 thymocyte | 2.02e-11 | 2 |
immature single positive thymocyte | 2.02e-11 | 2 |
early T lineage precursor | 2.02e-11 | 2 |
epithelial cell of lung | 4.17e-10 | 19 |
hepatocyte | 1.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 7.72e-21 | 1 |
iris | 7.72e-21 | 1 |
respiratory system epithelium | 8.33e-12 | 28 |
respiratory tract epithelium | 4.17e-10 | 19 |
lung epithelium | 4.17e-10 | 19 |
lung | 8.25e-09 | 22 |
respiratory tube | 8.25e-09 | 22 |
respiration organ | 8.25e-09 | 22 |
pair of lungs | 8.25e-09 | 22 |
lung primordium | 8.25e-09 | 22 |
lung bud | 8.25e-09 | 22 |
endo-epithelium | 1.16e-08 | 82 |
foregut | 3.73e-08 | 87 |
segment of respiratory tract | 3.69e-07 | 47 |
trunk region element | 5.38e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.25e-12 | 15 |
respiratory system cancer | 6.99e-12 | 16 |