FFCP PHASE1:Hg19::chr11:72433267..72433292,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116985 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16925 | |||
|TSSclassifier=strong | |||
|UniProt=B2RTS2,Q96P48 | |||
|association_with_transcript=110bp_to_ENST00000334211,NM_001135190,NM_015242,uc001oss.2,uc009yth.2,uc010rre.1_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_4_at_ARAP1_5end | |||
|id=chr11:72433267..72433292,- | |||
|ontology_enrichment_celltype=CL:0002057!1.81e-24!42;CL:0002194!4.58e-23!63;CL:0000576!4.58e-23!63;CL:0000040!4.58e-23!63;CL:0000559!4.58e-23!63;CL:0000766!6.45e-23!76;CL:0002009!1.95e-22!65;CL:0000860!2.58e-20!45;CL:0002087!2.93e-20!119;CL:0000738!8.89e-19!140;CL:0000557!2.21e-18!71;CL:0000839!3.07e-17!70;CL:0000037!6.89e-17!172;CL:0000566!6.89e-17!172;CL:0000988!1.49e-16!182;CL:0000763!2.06e-16!112;CL:0000049!2.06e-16!112;CL:0002032!3.02e-16!165;CL:0000837!3.02e-16!165;CL:0002031!4.19e-15!124;CL:0000115!8.37e-09!35;CL:0002393!3.10e-07!9;CL:0002397!3.10e-07!9;CL:0002139!8.24e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.16e-19;39!CL:0000234;1.16e-19;39!CL:0000860;5.22e-19;33!CL:0002057;5.22e-19;33!CL:0000576;2.60e-17;48!CL:0000766;4.28e-13;69!CL:0000763;2.38e-08;100!CL:0000115;2.57e-08;36!CL:0002087;2.27e-07;104!CL:0002139;3.01e-07;24!CL:0000791;4.67e-07;18!CL:0000789;4.67e-07;18!CL:0002419;4.67e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.36e-31,48;CL:0000234,2.36e-31,48;CL:0002194,5.59e-29,59;CL:0000576,5.59e-29,59;CL:0000040,5.59e-29,59;CL:0000559,5.59e-29,59;CL:0000766,1.01e-28,72;CL:0002009,9.29e-28,61;CL:0000860,6.13e-27,42;CL:0002057,6.13e-27,42;CL:0000557,5.09e-23,67;CL:0002087,1.16e-22,115;CL:0000839,1.55e-22,66;CL:0000738,9.49e-21,136;CL:0000763,1.98e-20,108;CL:0000049,1.98e-20,108;CL:0000037,4.21e-19,168;CL:0002032,2.00e-18,161;CL:0000837,2.00e-18,161;CL:0000988,2.20e-18,177;CL:0002031,3.28e-17,120;CL:0000115,6.66e-10,36;CL:0002393,7.57e-08,9;CL:0002397,7.57e-08,9;CL:0002139,2.23e-07,24;CL:0000791,4.75e-07,18;CL:0000789,4.75e-07,18;CL:0002420,4.75e-07,18;CL:0002419,4.75e-07,18;CL:0000790,4.75e-07,18;CL:0002078,4.88e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-19;42!CL:0000049;1.34e-07;108!CL:0000790;4.67e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.72e-21!112;UBERON:0002390!2.54e-21!102;UBERON:0003061!2.54e-21!102;UBERON:0007023!1.34e-20!115;UBERON:0003081!1.05e-18!216;UBERON:0002371!1.91e-14!80;UBERON:0002405!1.14e-12!115;UBERON:0001474!2.55e-11!86;UBERON:0004765!3.16e-08!101;UBERON:0001434!3.16e-08!101;UBERON:0001049!9.52e-08!57;UBERON:0005068!9.52e-08!57;UBERON:0006241!9.52e-08!57;UBERON:0007135!9.52e-08!57;UBERON:0001009!5.06e-07!113;UBERON:0000178!9.67e-07!15;UBERON:0000179!9.67e-07!15;UBERON:0000463!9.67e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.32e-07;15!UBERON:0000179;6.32e-07;15!UBERON:0000463;6.32e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.88e-26,108;UBERON:0002390,1.78e-25,98;UBERON:0003061,1.78e-25,98;UBERON:0003081,1.51e-22,203;UBERON:0007023,7.49e-22,114;UBERON:0002405,2.52e-20,93;UBERON:0002371,5.85e-18,76;UBERON:0001474,1.47e-14,82;UBERON:0004765,9.35e-12,90;UBERON:0001434,5.00e-09,100;UBERON:0001049,7.98e-08,56;UBERON:0005068,7.98e-08,56;UBERON:0006241,7.98e-08,56;UBERON:0007135,7.98e-08,56;UBERON:0000178,6.77e-07,15;UBERON:0000179,6.77e-07,15;UBERON:0000463,6.77e-07,15;UBERON:0001009,7.32e-07,112 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,2.00146596706261,0.446961094427288,1.74467704820074,0,1.26343974685366,0,1.22866968250754,2.79120467188971,0.218441372130172,0.263766978228454,0.618831764800233,1.32558950291166,2.6893005858071,0.602694528023977,2.92124036154949,2.43966399395253,1.10808952269109,0.612002073732759,0,0.85870796139317,0.273748850145768,0,0.840547463227464,0.328402357799783,0.314843125254717,20.8483066729919,13.0501995353052,4.79929982279836,0.919421224478927,0.90361775633475,1.10926203050036,0.309868802321207,0.995184627411951,3.22960483268332,12.7418943962332,12.6343001906189,11.0675544065084,26.8698569087909,25.2637059494804,28.0757368721263,22.9729217271712,21.1610528465733,21.5899814457156,21.6159004322287,15.2132118568076,12.6979612066992,5.46615545412086,5.37937483711111,5.67557351732605,8.27389633767885,16.7826017731795,8.12558919566051,22.9655654241978,19.1034305040492,15.5059204267108,21.4258724659632,15.4045932996525,12.1474053901818,8.90598510504134,9.17532825059507,8.95071976118658,9.28669563611469,6.24123747160254,11.8336227309159,6.53246529667532,7.82224377630302,6.29847649644838,11.502590550034,6.2607198117886,6.0127853613768,28.5194636521121,38.6939825936379,19.2885953867706,15.5013510982163,12.0141514273205,16.072558669708,29.6413253490899,33.020168415049,24.4769966044609,0,0.546138611262131,0,0.426730222566507,0.400395987036012,1.72425731986345,1.98313461835459,0,2.27685187643779,1.17447437874188,0.764546456250458,0,3.92355994087075,1.31692042387539,2.75393678159366,8.25322601773246,5.34563897398724,3.67810289859492,6.51844533267181,6.62826928028627,3.89653456815823,5.01347055983281,4.12448270464772,4.43067789167242,9.74893909554056,4.61128751012431,4.1618991219161,6.08420247033602,8.5668505513613,9.85330491499179,8.74890722656157,6.68852070224283,4.18142095219907,5.55215779218074,4.98186641682498,3.77990190030893,5.81945291644857,6.05274287215784,4.55758417699493,1.90090408889675,6.77588035849977,6.78329039118417,4.99722906209383,7.10331756132051,4.10563998460523,5.84659555351724,6.68600489458768,4.05508330871837,12.1903433156981,0.670700859703636,1.15076305659177,1.0843174571537,0.50133791063589,0.869079113764942,2.3858578411533,1.45990461090791,1.03988298880475,1.77383517970051,1.14185221401064,3.99486180268024,1.09288586487763,1.11235332835329,3.8945687238562,7.48757870386849,8.11043559165077,0.476981248610684,0,0.74291500265913,3.37896092523399,3.4409383804245,6.94281003215189,3.39184765154406,2.51699661725944,6.32771496462155,3.34391946458897,2.32575083252396,1.77883131343355,2.34304428935269,4.83395180530976,5.32190474002959,5.12530320851156,1.83831540172934,9.72170337458112,3.66128885964727,4.93964619777574,2.0270066486998,4.5994991239765,5.69559395740877,3.29763139074733,15.8136500923276,3.87780264148325,1.74437620857014,1.98788780678127,0.759783069987479,0.926864265692532,1.14734648299525,1.06400514659507,1.68203280042692,1.06748995729705,1.72667283892012,0.933633106199299,0.269421344139376,0.817309515567294,2.27036141467397,2.30470369792,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0.877955241761676,0.919463387397059,0.300476117813194,0.340296549480063,0.717558542755448,0.213557388818567,1.05965950579781,1.20036438433761,0.618315175430633,1.8034837803194,0.37223371266318,1.0126579934476,1.16924406193438,2.27190396819703,0.828449087780694,4.52608959092673,0,0.705264687593482,1.18692414617341,0.57978255948989,0.272746120590835,0,0,0,0.232387885739037,0.310983165046111,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0.653638332277218,0,0.269662616320329,0.588664395376038,0.38474715694639,7.38155454624648,2.80483547606892,0,0,1.26755034821831,0,4.13552934676983,1.32438929824395,0.122988438543114,2.23038153388083,0.768251997860379,1.1240175325762,0.201057944823262,0.648119116109707,0,0,0,0,1.52631302506568,4.90845922387651,3.70388410061289,4.18559134916116,0,0,31.5157767791869,14.9762729689112,15.7549032026052,0,1.6798212819886,0.283550194484773,1.07470227243418,0.290633938513962,0.766765358330422,0,0.088048434013226,0,0.432359860250884,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.336393253036082,0.87192013766656,0.5867062865676,0.904902010304444,0,0.845302752556,1.06375246633948,0,0.257207374262142,0,0.266422179016099,1.85871391755592,3.25572963234866,1.64648067356154,0,1.42156779497018,0,2.41151501647669,1.74306691720059,0.99972991182057,30.4059451602976,23.1038262058778,18.9750545534728,0.479249710983165,0,0,0.868687840005475,1.02738161275192,0,1.00876629594175,4.92576900504818,5.60631694634745,4.74869234235069,0.254094624222463,1.30139853857622,0,0.670065061337395,0.637938751653163,15.7291475028908,20.9413021442817,7.45947924184864,0.858840442033979,0.500170521059677,0.271265023699736,3.95144636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| |||
|short_description=p4@ARAP1 | |||
}} |
Revision as of 09:16, 11 January 2014
Short description: | p4@ARAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARAP1_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 110bp_to_ENST00000334211, NM_001135190, NM_015242, uc001oss.2, uc009yth.2, uc010rre.1_5end |
EntrezGene: | ARAP1 |
HGNC: | 16925 |
UniProt: | B2RTS2Q96P48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.88e-26 | 108 |
hematopoietic system | 1.78e-25 | 98 |
blood island | 1.78e-25 | 98 |
lateral plate mesoderm | 1.51e-22 | 203 |
adult organism | 7.49e-22 | 114 |
immune system | 2.52e-20 | 93 |
bone marrow | 5.85e-18 | 76 |
bone element | 1.47e-14 | 82 |
skeletal element | 9.35e-12 | 90 |
skeletal system | 5.00e-09 | 100 |
neural tube | 7.98e-08 | 56 |
neural rod | 7.98e-08 | 56 |
future spinal cord | 7.98e-08 | 56 |
neural keel | 7.98e-08 | 56 |
blood | 6.77e-07 | 15 |
haemolymphatic fluid | 6.77e-07 | 15 |
organism substance | 6.77e-07 | 15 |
circulatory system | 7.32e-07 | 112 |