FFCP PHASE1:Hg19::chr11:73587845..73587936,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51287 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24604 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NYJ1 | |||
|association_with_transcript=0bp_to_ENST00000537289,NM_016565,uc001ouj.2_5end | |||
|description=CAGE_peak_1_at_CHCHD8_5end | |||
|id=chr11:73587845..73587936,- | |||
|ontology_enrichment_celltype=CL:0000548!3.30e-25!679;CL:0000004!3.30e-25!679;CL:0000255!3.30e-25!679;CL:0000012!5.30e-25!682;CL:0002321!9.68e-24!248;CL:0000220!2.61e-23!246;CL:0000066!8.45e-21!254;CL:0000003!8.65e-14!722;CL:0000183!2.18e-13!59;CL:0000222!2.30e-13!119;CL:0000144!3.62e-13!625;CL:0000055!1.52e-12!180;CL:0000680!1.82e-11!57;CL:0000056!1.82e-11!57;CL:0000355!1.82e-11!57;CL:0000393!2.89e-11!60;CL:0000211!2.89e-11!60;CL:0000187!4.96e-11!54;CL:0002371!1.15e-10!591;CL:0000192!9.41e-10!42;CL:0000514!9.41e-10!42;CL:0000359!3.88e-08!32;CL:1000497!6.45e-07!18;CL:0002518!6.45e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.87e-08;32!CL:0000192;3.19e-07;43!CL:1000497;6.68e-07;17!CL:0002518;6.68e-07;17!CL:0000187;8.57e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.52e-24,250;CL:0000066,1.14e-20,253;CL:0000222,1.00e-13,121;CL:0000680,1.54e-11,58;CL:0000056,1.54e-11,58;CL:0000355,1.54e-11,58;CL:0000393,2.43e-11,61;CL:0000211,2.43e-11,61;CL:0000187,4.22e-11,55;CL:0000192,8.17e-10,43;CL:0000514,8.17e-10,43;CL:0000359,3.88e-08,32;CL:1000497,6.54e-07,17;CL:0002518,6.54e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;3.19e-07;43!CL:0000355;5.52e-07;58 | |||
|ontology_enrichment_disease=DOID:14566!3.78e-13!239;DOID:162!9.22e-13!235;DOID:305!3.43e-09!106;DOID:0050687!4.21e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.78e-13,239;DOID:162,9.22e-13,235;DOID:305,3.43e-09,106;DOID:0050687,4.21e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.38e-19!143;UBERON:0003104!2.11e-19!238;UBERON:0009142!2.11e-19!238;UBERON:0000490!5.21e-18!138;UBERON:0002100!1.08e-17!216;UBERON:0003914!1.57e-15!118;UBERON:0004290!2.73e-13!70;UBERON:0000914!5.45e-12!83;UBERON:0002329!5.45e-12!83;UBERON:0003077!5.45e-12!83;UBERON:0003059!5.45e-12!83;UBERON:0007282!5.45e-12!83;UBERON:0009618!5.45e-12!83;UBERON:0007285!5.45e-12!83;UBERON:0000486!6.33e-12!82;UBERON:0001134!5.79e-11!61;UBERON:0002036!5.79e-11!61;UBERON:0003082!5.79e-11!61;UBERON:0000481!6.83e-11!347;UBERON:0000119!1.03e-10!312;UBERON:0002385!2.69e-10!63;UBERON:0001015!2.69e-10!63;UBERON:0000383!2.69e-10!63;UBERON:0000483!3.04e-10!309;UBERON:0009569!1.84e-09!113;UBERON:0002049!7.63e-09!79;UBERON:0007798!7.63e-09!79;UBERON:0001637!1.40e-08!42;UBERON:0003509!1.40e-08!42;UBERON:0004572!1.40e-08!42;UBERON:0005172!7.04e-08!55;UBERON:0005173!7.04e-08!55;UBERON:0001981!2.08e-07!60;UBERON:0007500!2.08e-07!60;UBERON:0004537!2.08e-07!60;UBERON:0006965!2.08e-07!60;UBERON:0002417!2.36e-07!61;UBERON:0000916!2.36e-07!61;UBERON:0000055!2.60e-07!69;UBERON:0004872!8.92e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.44e-20,148;UBERON:0003104,6.24e-20,160;UBERON:0009142,6.24e-20,160;UBERON:0002100,6.33e-19,199;UBERON:0005256,2.22e-18,122;UBERON:0007503,4.20e-16,78;UBERON:0003914,1.96e-15,117;UBERON:0002329,2.28e-13,71;UBERON:0003059,2.28e-13,71;UBERON:0007282,2.28e-13,71;UBERON:0004290,2.28e-13,71;UBERON:0009618,2.28e-13,71;UBERON:0003077,9.32e-13,72;UBERON:0007285,9.32e-13,72;UBERON:0007524,1.91e-12,73;UBERON:0000486,5.17e-12,83;UBERON:0000119,3.27e-11,309;UBERON:0001134,4.84e-11,62;UBERON:0002036,4.84e-11,62;UBERON:0003082,4.84e-11,62;UBERON:0000483,9.94e-11,306;UBERON:0002385,2.23e-10,64;UBERON:0001015,2.23e-10,64;UBERON:0000383,2.23e-10,64;UBERON:0009569,2.86e-09,112;UBERON:0002049,3.96e-09,78;UBERON:0007798,3.96e-09,78;UBERON:0001637,1.40e-08,42;UBERON:0003509,1.40e-08,42;UBERON:0004572,1.40e-08,42;UBERON:0005172,8.52e-08,54;UBERON:0005173,8.52e-08,54;UBERON:0007500,1.05e-07,59;UBERON:0001981,1.05e-07,59;UBERON:0004537,1.05e-07,59;UBERON:0006965,1.05e-07,59;UBERON:0000055,1.40e-07,68;UBERON:0002417,2.87e-07,60;UBERON:0000916,2.87e-07,60;UBERON:0005177,3.42e-07,101;UBERON:0001048,4.82e-07,160;UBERON:0004872,5.33e-07,83 | |||
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| |||
|short_description=p1@CHCHD8 | |||
}} |
Revision as of 09:22, 11 January 2014
Short description: | p1@CHCHD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHCHD8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537289, NM_016565, uc001ouj.2_5end |
EntrezGene: | CHCHD8 |
HGNC: | 24604 |
UniProt: | Q9NYJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.52e-24 | 250 |
epithelial cell | 1.14e-20 | 253 |
mesodermal cell | 1.00e-13 | 121 |
muscle precursor cell | 1.54e-11 | 58 |
myoblast | 1.54e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-11 | 58 |
electrically responsive cell | 2.43e-11 | 61 |
electrically active cell | 2.43e-11 | 61 |
muscle cell | 4.22e-11 | 55 |
smooth muscle cell | 8.17e-10 | 43 |
smooth muscle myoblast | 8.17e-10 | 43 |
vascular associated smooth muscle cell | 3.88e-08 | 32 |
kidney cell | 6.54e-07 | 17 |
kidney epithelial cell | 6.54e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.78e-13 | 239 |
cancer | 9.22e-13 | 235 |
carcinoma | 3.43e-09 | 106 |
cell type cancer | 4.21e-09 | 143 |