FFCP PHASE1:Hg19::chr11:121289611..121289623,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1333 | |||
|description=CAGE_peak_at_chr11:121289611..121289623,+ | |||
|id=chr11:121289611..121289623,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.05e-66!140;CL:0002057!3.97e-63!42;CL:0000860!4.23e-58!45;CL:0002087!1.95e-57!119;CL:0002031!6.80e-56!124;CL:0000766!4.70e-53!76;CL:0000037!3.56e-50!172;CL:0000566!3.56e-50!172;CL:0002032!1.41e-49!165;CL:0000837!1.41e-49!165;CL:0000988!2.60e-46!182;CL:0000839!3.05e-40!70;CL:0000557!1.67e-39!71;CL:0002194!2.17e-39!63;CL:0000576!2.17e-39!63;CL:0000040!2.17e-39!63;CL:0000559!2.17e-39!63;CL:0002009!7.93e-38!65;CL:0000763!2.06e-31!112;CL:0000049!2.06e-31!112;CL:0000838!3.01e-16!52;CL:0000542!8.19e-16!53;CL:0000051!8.19e-16!53;CL:0000134!7.22e-14!358;CL:0000094!1.42e-13!8;CL:0002320!3.06e-13!365;CL:0000219!4.75e-11!390;CL:0002393!7.29e-10!9;CL:0002397!7.29e-10!9;CL:0000081!1.72e-09!11;CL:0000048!1.76e-08!430;CL:0000624!1.96e-08!6;CL:0000723!4.01e-08!436;CL:0000775!6.37e-08!3;CL:0000034!1.16e-07!444;CL:0000767!2.60e-07!3;CL:0000791!3.06e-07!18;CL:0000789!3.06e-07!18;CL:0002420!3.06e-07!18;CL:0002419!3.06e-07!18;CL:0000790!3.06e-07!18;CL:0000945!3.54e-07!24;CL:0000826!3.54e-07!24;CL:0000084!4.00e-07!25;CL:0000827!4.00e-07!25;CL:0000898!6.87e-07!3;CL:0000623!7.92e-07!3;CL:0000825!7.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.18e-44;33!CL:0002057;6.18e-44;33!CL:0000473;3.01e-31;39!CL:0000234;3.01e-31;39!CL:0000576;2.64e-29;48!CL:0000094;1.87e-24;8!CL:0000766;1.39e-20;69!CL:0000081;1.63e-17;11!CL:0000775;1.82e-13;3!CL:0000767;2.56e-12;3!CL:0000763;2.96e-11;100!CL:0002087;4.99e-11;104!CL:0000738;1.06e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.11e-49,42;CL:0002057,6.11e-49,42;CL:0000766,1.26e-45,72;CL:0000473,4.58e-42,48;CL:0000234,4.58e-42,48;CL:0000738,1.72e-35,136;CL:0002194,1.91e-32,59;CL:0000576,1.91e-32,59;CL:0000040,1.91e-32,59;CL:0000559,1.91e-32,59;CL:0002009,3.31e-31,61;CL:0000839,1.98e-28,66;CL:0000763,4.66e-28,108;CL:0000049,4.66e-28,108;CL:0000557,6.35e-28,67;CL:0002087,3.36e-27,115;CL:0000037,4.29e-27,168;CL:0002032,6.81e-27,161;CL:0000837,6.81e-27,161;CL:0000988,2.82e-25,177;CL:0000094,1.52e-24,8;CL:0002031,6.71e-24,120;CL:0000081,1.41e-17,11;CL:0000775,1.61e-13,3;CL:0000767,2.24e-12,3;CL:0000134,2.57e-08,354;CL:0002320,5.43e-08,361;CL:0000219,7.52e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-34;42!CL:0000049;3.38e-09;108 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-49!102;UBERON:0003061!1.21e-49!102;UBERON:0002193!9.01e-44!112;UBERON:0002371!1.61e-35!80;UBERON:0001474!3.58e-32!86;UBERON:0004765!1.47e-25!101;UBERON:0001434!1.47e-25!101;UBERON:0002405!2.02e-23!115;UBERON:0003081!7.94e-17!216;UBERON:0000178!1.63e-16!15;UBERON:0000179!1.63e-16!15;UBERON:0000463!1.63e-16!15;UBERON:0002384!2.17e-12!375;UBERON:0002204!7.15e-11!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.42e-26;15!UBERON:0000179;5.42e-26;15!UBERON:0000463;5.42e-26;15!UBERON:0002390;2.24e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.42e-39,98;UBERON:0003061,2.42e-39,98;UBERON:0002193,5.49e-35,108;UBERON:0000178,5.59e-26,15;UBERON:0000179,5.59e-26,15;UBERON:0000463,5.59e-26,15;UBERON:0002371,5.80e-24,76;UBERON:0001474,8.39e-22,82;UBERON:0004765,2.28e-19,90;UBERON:0002405,1.46e-18,93;UBERON:0001434,7.14e-17,100;UBERON:0003081,6.06e-15,203;UBERON:0002204,6.36e-08,167;UBERON:0002384,1.51e-07,371;UBERON:0000926,6.37e-07,315;UBERON:0004120,6.37e-07,315;UBERON:0006603,6.37e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,5.50709987588466,1.15148819429164,1.54816123316076,0,0,0,0.232401601740905,0,0,0,0.802177789880567,1.30206522429511,0,0,0,1.01778767145695,0.755751887377619,3.88134497900506,0.929716147622738,0.411167888021826,4.02618282163635,6.04154023876516,3.33008918487831,6.3850202069918,1.72372840368309,1.29096936716765,1.35426486594342,0.941211697713023,1.63743690034707,2.9214052977861,1.22433556948361,0.320929027076094,5.75403413219137,2.63881040149373,4.18873681005427,11.9342930149154,0.580418477257168,0.56738522469114,2.4912889959823,8.03995728821578,5.73631210262222,9.99068685643537,0.605399502633369,0,5.06339819905415,0.211255286311942,0.212604299965044,1.04829322754188,0.22465726229299,0.901061357049038,0,0.285012743741249,0,1.82664153764634,0,0,0,0.426730222566507,0,0,1.32208974556972,0,2.27685187643779,0.587237189370939,1.14681968437569,0,0,0,0.590129310341499,0,1.02800749499755,0.167186495390678,0.977766799900771,0,1.94826728407911,0,2.06224135232386,0.664601683750863,0,0,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0,0.766440987203842,0,1.01207876807801,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.07813787429759,1.41177339907723,0,0,0,0,0,11.2351053592077,2.99161459204025,13.2612964299531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.15714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,4.56702848308952,6.117097657139,7.40541343326411,5.24109906007136,5.34770955012053,4.53931317834902,7.02040868409549,7.13812658664843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,0.123084805461069,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:121289611..121289623,+ | |||
}} |
Revision as of 10:51, 11 January 2014
Short description: | p@chr11:121289611..121289623, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121289611..121289623, + |
Coexpression cluster: | C1333_Eosinophils_CD14_Neutrophils_Whole_Basophils_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.11e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.11e-49 | 42 |
myeloid leukocyte | 1.26e-45 | 72 |
defensive cell | 4.58e-42 | 48 |
phagocyte | 4.58e-42 | 48 |
leukocyte | 1.72e-35 | 136 |
monopoietic cell | 1.91e-32 | 59 |
monocyte | 1.91e-32 | 59 |
monoblast | 1.91e-32 | 59 |
promonocyte | 1.91e-32 | 59 |
macrophage dendritic cell progenitor | 3.31e-31 | 61 |
myeloid lineage restricted progenitor cell | 1.98e-28 | 66 |
myeloid cell | 4.66e-28 | 108 |
common myeloid progenitor | 4.66e-28 | 108 |
granulocyte monocyte progenitor cell | 6.35e-28 | 67 |
nongranular leukocyte | 3.36e-27 | 115 |
hematopoietic stem cell | 4.29e-27 | 168 |
hematopoietic oligopotent progenitor cell | 6.81e-27 | 161 |
hematopoietic multipotent progenitor cell | 6.81e-27 | 161 |
hematopoietic cell | 2.82e-25 | 177 |
granulocyte | 1.52e-24 | 8 |
hematopoietic lineage restricted progenitor cell | 6.71e-24 | 120 |
blood cell | 1.41e-17 | 11 |
neutrophil | 1.61e-13 | 3 |
basophil | 2.24e-12 | 3 |
mesenchymal cell | 2.57e-08 | 354 |
connective tissue cell | 5.43e-08 | 361 |
motile cell | 7.52e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.42e-39 | 98 |
blood island | 2.42e-39 | 98 |
hemolymphoid system | 5.49e-35 | 108 |
blood | 5.59e-26 | 15 |
haemolymphatic fluid | 5.59e-26 | 15 |
organism substance | 5.59e-26 | 15 |
bone marrow | 5.80e-24 | 76 |
bone element | 8.39e-22 | 82 |
skeletal element | 2.28e-19 | 90 |
immune system | 1.46e-18 | 93 |
skeletal system | 7.14e-17 | 100 |
lateral plate mesoderm | 6.06e-15 | 203 |
musculoskeletal system | 6.36e-08 | 167 |
connective tissue | 1.51e-07 | 371 |
mesoderm | 6.37e-07 | 315 |
mesoderm-derived structure | 6.37e-07 | 315 |
presumptive mesoderm | 6.37e-07 | 315 |