FFCP PHASE1:Hg19::chr11:122051600..122051617,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:122051600..122051617,+ | |||
|id=chr11:122051600..122051617,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.32e-30!180;CL:0000680!3.83e-23!57;CL:0000056!3.83e-23!57;CL:0000355!3.83e-23!57;CL:0000187!7.20e-20!54;CL:0000057!2.55e-19!75;CL:0000183!1.84e-18!59;CL:0000393!3.07e-18!60;CL:0000211!3.07e-18!60;CL:0000192!8.87e-17!42;CL:0000514!8.87e-17!42;CL:0000359!5.82e-16!32;CL:0000222!1.81e-15!119;CL:0002620!9.89e-14!23;CL:0000048!2.52e-13!430;CL:0000723!9.99e-13!436;CL:0000034!5.84e-12!444;CL:0002551!3.69e-09!6;CL:0002539!4.99e-07!10;CL:0002594!6.17e-07!4;CL:0002371!6.56e-07!591;CL:0000144!8.50e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.32e-21;32!CL:0002551;1.18e-14;6!CL:0000192;8.82e-13;43!CL:0002594;8.86e-13;4!CL:0002596;8.06e-12;2!CL:0002539;5.03e-09;10!CL:0000515;9.47e-09;3!CL:0002540;1.11e-08;6!CL:0000346;1.92e-08;3!CL:1000428;1.92e-08;3!CL:0002620;6.23e-08;23!CL:0000056;9.36e-07;4!CL:0000511;9.75e-07;1!CL:0002625;9.75e-07;1!CL:0000216;9.75e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.37e-22,32;CL:0000192,9.27e-16,43;CL:0000514,9.27e-16,43;CL:0000680,1.52e-15,58;CL:0000056,1.52e-15,58;CL:0000355,1.52e-15,58;CL:0002551,1.65e-14,6;CL:0002594,4.66e-13,4;CL:0000393,2.56e-12,61;CL:0000211,2.56e-12,61;CL:0002596,8.12e-12,2;CL:0000187,8.33e-12,55;CL:0002539,6.12e-09,10;CL:0002540,1.01e-08,6;CL:0000346,2.04e-08,3;CL:1000428,2.04e-08,3;CL:0000222,3.38e-08,121;CL:0002620,9.22e-08,23;CL:0000511,6.24e-07,1;CL:0002625,6.24e-07,1;CL:0000216,6.24e-07,1;CL:0000515,9.27e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;8.82e-13;43!CL:0000355;6.02e-08;58!CL:0000515;9.36e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.65e-08;3!DOID:127;3.65e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.52e-08,3;DOID:127,1.52e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.66e-30!70;UBERON:0000914!4.57e-30!83;UBERON:0002329!4.57e-30!83;UBERON:0003077!4.57e-30!83;UBERON:0003059!4.57e-30!83;UBERON:0007282!4.57e-30!83;UBERON:0009618!4.57e-30!83;UBERON:0007285!4.57e-30!83;UBERON:0000486!1.33e-23!82;UBERON:0001134!7.95e-21!61;UBERON:0002036!7.95e-21!61;UBERON:0003082!7.95e-21!61;UBERON:0002385!8.77e-20!63;UBERON:0001015!8.77e-20!63;UBERON:0000383!8.77e-20!63;UBERON:0001637!4.20e-17!42;UBERON:0003509!4.20e-17!42;UBERON:0004572!4.20e-17!42;UBERON:0005256!7.55e-16!143;UBERON:0000475!1.19e-15!365;UBERON:0004573!3.44e-13!33;UBERON:0004571!3.44e-13!33;UBERON:0002067!3.97e-13!9;UBERON:0004016!3.97e-13!9;UBERON:0010083!3.97e-13!9;UBERON:0002049!1.46e-11!79;UBERON:0007798!1.46e-11!79;UBERON:0002100!1.67e-11!216;UBERON:0002199!1.92e-10!45;UBERON:0002416!1.92e-10!45;UBERON:0001981!2.66e-10!60;UBERON:0007500!2.66e-10!60;UBERON:0004537!2.66e-10!60;UBERON:0006965!2.66e-10!60;UBERON:0000055!3.51e-10!69;UBERON:0003102!3.88e-09!95;UBERON:0002097!4.45e-09!40;UBERON:0000119!4.75e-09!312;UBERON:0000483!1.52e-08!309;UBERON:0004872!1.68e-08!84;UBERON:0004535!6.21e-08!110;UBERON:0000490!8.31e-08!138;UBERON:0001009!1.83e-07!113;UBERON:0000481!4.06e-07!347;UBERON:0004237!4.99e-07!10;UBERON:0004695!4.99e-07!10;UBERON:0002111!4.99e-07!10;UBERON:0004178!4.99e-07!10;UBERON:0001310!6.17e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.12e-21;9!UBERON:0004573;2.37e-17;33!UBERON:0004571;2.37e-17;33!UBERON:0001637;1.73e-13;42!UBERON:0003509;1.73e-13;42!UBERON:0004572;1.73e-13;42!UBERON:0001310;8.86e-13;4!UBERON:0005396;8.06e-12;2!UBERON:0000947;4.21e-09;21!UBERON:0010191;4.21e-09;21!UBERON:0004237;5.03e-09;10!UBERON:0004695;5.03e-09;10!UBERON:0002111;5.03e-09;10!UBERON:0004178;5.03e-09;10!UBERON:0007500;1.33e-08;56!UBERON:0001981;1.33e-08;56!UBERON:0004537;1.33e-08;56!UBERON:0000055;1.58e-08;65!UBERON:0000412;1.92e-08;3!UBERON:0001992;1.92e-08;3!UBERON:0001136;9.75e-07;1!UBERON:0001343;9.75e-07;1!UBERON:0004910;9.75e-07;1!UBERON:0004813;9.75e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.52e-26,71;UBERON:0003059,2.52e-26,71;UBERON:0007282,2.52e-26,71;UBERON:0004290,2.52e-26,71;UBERON:0009618,2.52e-26,71;UBERON:0003077,6.74e-26,72;UBERON:0007285,6.74e-26,72;UBERON:0007524,1.75e-25,73;UBERON:0007503,1.44e-23,78;UBERON:0001637,1.37e-22,42;UBERON:0003509,1.37e-22,42;UBERON:0004572,1.37e-22,42;UBERON:0000486,6.97e-22,83;UBERON:0002067,3.14e-21,9;UBERON:0004016,3.14e-21,9;UBERON:0010083,3.14e-21,9;UBERON:0004573,6.03e-18,33;UBERON:0004571,6.03e-18,33;UBERON:0007500,3.12e-15,59;UBERON:0001981,3.12e-15,59;UBERON:0004537,3.12e-15,59;UBERON:0006965,3.12e-15,59;UBERON:0005256,3.92e-15,122;UBERON:0001134,2.36e-14,62;UBERON:0002036,2.36e-14,62;UBERON:0003082,2.36e-14,62;UBERON:0002385,8.17e-14,64;UBERON:0001015,8.17e-14,64;UBERON:0000383,8.17e-14,64;UBERON:0004872,2.29e-13,83;UBERON:0000490,4.23e-13,148;UBERON:0001310,4.66e-13,4;UBERON:0000055,7.87e-13,68;UBERON:0005396,8.12e-12,2;UBERON:0002049,8.14e-11,78;UBERON:0007798,8.14e-11,78;UBERON:0003104,1.82e-10,160;UBERON:0009142,1.82e-10,160;UBERON:0000926,1.56e-09,315;UBERON:0004120,1.56e-09,315;UBERON:0006603,1.56e-09,315;UBERON:0000947,4.83e-09,21;UBERON:0010191,4.83e-09,21;UBERON:0004237,6.12e-09,10;UBERON:0004695,6.12e-09,10;UBERON:0002111,6.12e-09,10;UBERON:0004178,6.12e-09,10;UBERON:0000412,2.04e-08,3;UBERON:0001992,2.04e-08,3;UBERON:0004535,4.43e-08,109;UBERON:0002199,6.31e-08,46;UBERON:0002416,6.31e-08,46;UBERON:0001009,8.78e-08,112;UBERON:0002100,1.49e-07,199;UBERON:0003914,2.53e-07,117;UBERON:0002097,3.43e-07,41;UBERON:0001136,6.24e-07,1;UBERON:0001343,6.24e-07,1;UBERON:0004910,6.24e-07,1;UBERON:0005154,6.24e-07,1;UBERON:0005295,6.24e-07,1;UBERON:0004813,6.24e-07,1;UBERON:0005297,6.24e-07,1;UBERON:0005294,6.24e-07,1;UBERON:0010141,6.24e-07,1;UBERON:0005891,6.24e-07,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0.872338524100369,0,1.26343974685366,0,0,0,0,0,0,0,1.34465029290355,0,1.46062018077475,0,0,0.612002073732759,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,2.58070378531837,0,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,9.40105183773854,0,0,1.12135520028461,0,0.24666754841716,0,0,0,0.151357427644931,0,0,1.5608003841516,0.570471821544449,0.448346041655403,1.05691048779388,1.29498355494505,1.54495887372473,0.816616685019573,1.71968044236475,0.309977343527296,0,0.989067717114227,0,0,1.0100166837244,0.500474079487857,0.277064115484183,0,0.30648779579902,0.600952235626387,0,0,0.213557388818567,0.847727604638247,1.20036438433761,0.515262646192195,0,0.558350568994769,0.843881661206331,1.16924406193438,0,0.276149695926898,0.161646056818812,0,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0,0,0,3.12899064659632,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,1.02882949704857,0,1.5985330740966,0,0,0,0.325736184293735,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0.479249710983165,0,0,3.32997005335432,5.75333703141074,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0,1.27587750330633,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0.695068915744663,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0.462629081407967,0.177561725313127,0.410635780069046,0,0.464841513839837,0,0.200506470303285,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.290012154876366,0.462145851343933,0.307007349452259,0.689182862422653,0.429680979473094,0.290033387828457,0.852266274161009,0,0,0,0,0,0,1.25924938732256,6.970372701606,0.924100740528266,0.532306030317022,0.869932992075073,0.74129687641568,0.429374660225974,0,0.316379424718726,0,0.255897791311334,0,1.27281299170375,1.56989728039846,0,0,0.235624804691373,1.2130948894399,0,0.842516912477962,0,1.46228093778771,0,0.136499911407986,0,0,0.551365343546124,0,1.31535265576129,0.578775534266688,0,1.42037263873893,1.54911749049875,0.563391205064483,0,0,1.78335525740625,0.709522128141196,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,1.72844298240254,1.95952416065645,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,1.76097531226803,0.889811221596536,0.228840068396924,0,0,0.295710299979268,0.159296767163702,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0.358177682162975,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr11:122051600..122051617,+ | |||
}} |
Revision as of 10:54, 11 January 2014
Short description: | p@chr11:122051600..122051617, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:122051600..122051617, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.37e-22 | 32 |
smooth muscle cell | 9.27e-16 | 43 |
smooth muscle myoblast | 9.27e-16 | 43 |
muscle precursor cell | 1.52e-15 | 58 |
myoblast | 1.52e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-15 | 58 |
fibroblast of dermis | 1.65e-14 | 6 |
smooth muscle cell of the umbilical artery | 4.66e-13 | 4 |
electrically responsive cell | 2.56e-12 | 61 |
electrically active cell | 2.56e-12 | 61 |
smooth muscle cell of the carotid artery | 8.12e-12 | 2 |
muscle cell | 8.33e-12 | 55 |
aortic smooth muscle cell | 6.12e-09 | 10 |
mesenchymal stem cell of the bone marrow | 1.01e-08 | 6 |
hair follicle dermal papilla cell | 2.04e-08 | 3 |
stem cell of epidermis | 2.04e-08 | 3 |
mesodermal cell | 3.38e-08 | 121 |
skin fibroblast | 9.22e-08 | 23 |
androgen binding protein secreting cell | 6.24e-07 | 1 |
seminiferous tubule epithelial cell | 6.24e-07 | 1 |
Sertoli cell | 6.24e-07 | 1 |
skeletal muscle myoblast | 9.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.52e-08 | 3 |
leiomyoma | 1.52e-08 | 3 |